RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeastyeast

Gene LST8, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LST8YNL006W TY1B-MR2Q04670 1755 aaKnown RBP9.35□□□□□ -0.91
LST8YNL006W TY1B-LR1Q12088 1755 aaKnown RBP9.35□□□□□ -0.91
LST8YNL006W TY1B-NL1Q12112 1755 aa9.35□□□□□ -0.91
LST8YNL006W TY1B-GR1Q12141 1755 aa9.35□□□□□ -0.91
LST8YNL006W TY1B-BLQ12490 1755 aa9.35□□□□□ -0.91
LST8YNL006W MMS22Q06164 1454 aa9.34□□□□□ -0.91
LST8YNL006W SPT21P35209 758 aa9.32□□□□□ -0.92
LST8YNL006W SMC4Q12267 1418 aa9.31□□□□□ -0.92
LST8YNL006W NTE1Q04958 1679 aa9.3□□□□□ -0.92
LST8YNL006W YRF1-1P0CX20 1796 aa9.29□□□□□ -0.92
LST8YNL006W YRF1-5P0CX21 1796 aa9.29□□□□□ -0.92
LST8YNL006W YRF1-8P0CX22 1796 aa9.29□□□□□ -0.92
LST8YNL006W MET5P47169 1442 aa9.29□□□□□ -0.92
LST8YNL006W YKR023WP36119 530 aaKnown RBP9.27□□□□□ -0.93
LST8YNL006W SPP41P38904 1435 aa9.26□□□□□ -0.93
LST8YNL006W VTH1P40438 1549 aa9.25□□□□□ -0.93
LST8YNL006W VTH2P40890 1549 aa9.25□□□□□ -0.93
LST8YNL006W RPO21P04050 1733 aaKnown RBP9.25□□□□□ -0.93
LST8YNL006W TRM732Q03496 1420 aa9.23□□□□□ -0.93
LST8YNL006W BNI1P41832 1953 aa9.19□□□□□ -0.94
LST8YNL006W TSC11P40061 1430 aa9.18□□□□□ -0.94
LST8YNL006W NUP159P40477 1460 aa9.18□□□□□ -0.94
LST8YNL006W MYO4P32492 1471 aa9.16□□□□□ -0.94
LST8YNL006W LTE1P07866 1435 aa9.16□□□□□ -0.94
LST8YNL006W UBP10P53874 792 aaPredicted RBP9.13□□□□□ -0.95
LST8YNL006W SNQ2P32568 1501 aaKnown RBP9.13□□□□□ -0.95
LST8YNL006W VPS15P22219 1454 aa9.12□□□□□ -0.95
LST8YNL006W MLP2P40457 1679 aa9.11□□□□□ -0.95
LST8YNL006W GEA2P39993 1459 aaKnown RBP9.11□□□□□ -0.95
LST8YNL006W ULS1Q08562 1619 aa9.09□□□□□ -0.95
LST8YNL006W MAP2P38174 421 aaKnown RBP9.09□□□□□ -0.95
LST8YNL006W YTA7P40340 1379 aa9.08□□□□□ -0.96
LST8YNL006W TFC8Q12308 588 aa9.07□□□□□ -0.96
LST8YNL006W SPO14P36126 1683 aa9.06□□□□□ -0.96
LST8YNL006W HOP09932 586 aa9.04□□□□□ -0.96
LST8YNL006W SNT2P53127 1403 aa9.03□□□□□ -0.96
LST8YNL006W DCD1P06773 312 aa9.02□□□□□ -0.97
LST8YNL006W PDR15Q04182 1529 aaKnown RBP9□□□□□ -0.97
LST8YNL006W ITT1Q04638 464 aa9□□□□□ -0.97
LST8YNL006W DOP1Q03921 1698 aa8.97□□□□□ -0.97
LST8YNL006W NUP170P38181 1502 aa8.96□□□□□ -0.97
LST8YNL006W IRC20Q06554 1556 aa8.95□□□□□ -0.98
LST8YNL006W DRS2P39524 1355 aa8.95□□□□□ -0.98
LST8YNL006W GDB1Q06625 1536 aa8.95□□□□□ -0.98
LST8YNL006W MMS1Q06211 1407 aa8.94□□□□□ -0.98
LST8YNL006W PDR12Q02785 1511 aa8.94□□□□□ -0.98
LST8YNL006W STH1P32597 1359 aa8.93□□□□□ -0.98
LST8YNL006W DNF2Q12675 1612 aa8.93□□□□□ -0.98
LST8YNL006W BUD31P25337 157 aaPredicted RBP8.92□□□□□ -0.98
LST8YNL006W RIM101P33400 625 aa8.91□□□□□ -0.98
LST8YNL006W YBT1P32386 1661 aa8.89□□□□□ -0.99
LST8YNL006W SAS10Q12136 610 aaPredicted RBP8.88□□□□□ -0.99
LST8YNL006W MIF2P35201 549 aa8.86□□□□□ -0.99
LST8YNL006W TY3B-GQ99315 1547 aa8.85□□□□□ -0.99
LST8YNL006W MET10P39692 1035 aa8.84□□□□□ -0.99
LST8YNL006W PDR10P51533 1564 aa8.84□□□□□ -0.99
LST8YNL006W SCY1P53009 804 aa8.84□□□□□ -0.99
LST8YNL006W RTT106P40161 455 aa8.83□□□□□ -1
LST8YNL006W NUP157P40064 1391 aaKnown RBP8.83□□□□□ -1
LST8YNL006W IQG1Q12280 1495 aa8.83□□□□□ -1
LST8YNL006W CHC1P22137 1653 aaKnown RBP8.82□□□□□ -1
LST8YNL006W BUD3P25558 1636 aa8.8□□□□□ -1
LST8YNL006W ARO1P08566 1588 aaKnown RBP8.78□□□□□ -1
LST8YNL006W GEA1P47102 1408 aaPredicted RBP8.78□□□□□ -1
LST8YNL006W IFH1P39520 1085 aa8.77□□□□□ -1.01
LST8YNL006W ABP1P15891 592 aaKnown RBP8.76□□□□□ -1.01
LST8YNL006W BCH2P36122 765 aa8.76□□□□□ -1.01
LST8YNL006W TRM3Q07527 1436 aa8.75□□□□□ -1.01
LST8YNL006W SLX5P32828 619 aaKnown RBP8.74□□□□□ -1.01
LST8YNL006W TGL3P40308 642 aa8.71□□□□□ -1.02
LST8YNL006W YOR093CQ12275 1648 aa8.71□□□□□ -1.02
LST8YNL006W TIF4632P39936 914 aaKnown RBP8.7□□□□□ -1.02
LST8YNL006W CAT8P39113 1433 aa8.69□□□□□ -1.02
LST8YNL006W SEC7P11075 2009 aaKnown RBP8.68□□□□□ -1.02
LST8YNL006W TAF7Q05021 590 aa8.67□□□□□ -1.02
LST8YNL006W DNF3Q12674 1656 aa8.64□□□□□ -1.03
LST8YNL006W YSP2Q06681 1438 aa8.63□□□□□ -1.03
LST8YNL006W OXP1P28273 1286 aa8.6□□□□□ -1.03
LST8YNL006W CKB1P43639 278 aa8.58□□□□□ -1.04
LST8YNL006W BNR1P40450 1375 aa8.54□□□□□ -1.04
LST8YNL006W YFR006WP43590 535 aa8.54□□□□□ -1.04
LST8YNL006W EPS1P40557 701 aa8.51□□□□□ -1.05
LST8YNL006W USO1P25386 1790 aa8.5□□□□□ -1.05
LST8YNL006W SRB8P25648 1427 aa8.5□□□□□ -1.05
LST8YNL006W VMR1P38735 1592 aa8.49□□□□□ -1.05
LST8YNL006W UBP9P39967 754 aa8.49□□□□□ -1.05
LST8YNL006W BDF1P35817 686 aa8.48□□□□□ -1.05
LST8YNL006W NUP188P52593 1655 aaKnown RBP8.48□□□□□ -1.05
LST8YNL006W IML1P47170 1584 aa8.45□□□□□ -1.06
LST8YNL006W PTP3P40048 928 aa8.42□□□□□ -1.06
LST8YNL006W SIS1P25294 352 aaKnown RBP8.41□□□□□ -1.06
LST8YNL006W YAP3P38749 330 aa8.4□□□□□ -1.06
LST8YNL006W SSM4P40318 1319 aa8.38□□□□□ -1.07
LST8YNL006W DMA1P38823 416 aa8.38□□□□□ -1.07
LST8YNL006W YIL055CP40523 627 aaKnown RBP8.38□□□□□ -1.07
LST8YNL006W IKI3Q06706 1349 aaKnown RBP8.37□□□□□ -1.07
LST8YNL006W BUD21Q08492 214 aaPredicted RBP8.35□□□□□ -1.07
LST8YNL006W PDR5P33302 1511 aaKnown RBP8.34□□□□□ -1.07
LST8YNL006W GCN2P15442 1659 aa8.34□□□□□ -1.07
LST8YNL006W MST1P07236 462 aa8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms