RNA–Protein interactions for RNA: YMR297W

PRC1, Transcript of Vacuolar carboxypeptidase Y (proteinase C, CPY), yeastyeast

Gene PRC1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRC1YMR297W ESC1Q03661 1658 aaKnown RBP9.53□□□□□ -0.88
PRC1YMR297W MMS1Q06211 1407 aa9.51□□□□□ -0.89
PRC1YMR297W QCR6P00127 147 aa9.5□□□□□ -0.89
PRC1YMR297W TY1B-DR3Q99231 1755 aa9.5□□□□□ -0.89
PRC1YMR297W ROX1P25042 368 aa9.49□□□□□ -0.89
PRC1YMR297W GCN2P15442 1659 aa9.48□□□□□ -0.89
PRC1YMR297W AVT3P36062 692 aa9.48□□□□□ -0.89
PRC1YMR297W YIR014WP40570 242 aa9.48□□□□□ -0.89
PRC1YMR297W AIM44Q99299 758 aa9.48□□□□□ -0.89
PRC1YMR297W FPR3P38911 411 aaKnown RBP9.45□□□□□ -0.9
PRC1YMR297W ORC1P54784 914 aaPredicted RBP9.45□□□□□ -0.9
PRC1YMR297W YBT1P32386 1661 aa9.45□□□□□ -0.9
PRC1YMR297W PDR5P33302 1511 aaKnown RBP9.44□□□□□ -0.9
PRC1YMR297W NOP7P53261 605 aaKnown RBP9.44□□□□□ -0.9
PRC1YMR297W ABP1P15891 592 aaKnown RBP9.43□□□□□ -0.9
PRC1YMR297W TY2B-LR1P0C2J3 1770 aa9.43□□□□□ -0.9
PRC1YMR297W TY2B-FP0CX63 1770 aa9.43□□□□□ -0.9
PRC1YMR297W TY2B-GR2P0CX64 1770 aa9.43□□□□□ -0.9
PRC1YMR297W TY2B-CP25384 1770 aa9.43□□□□□ -0.9
PRC1YMR297W TY2B-DR2Q03494 1770 aa9.43□□□□□ -0.9
PRC1YMR297W TY1B-DR1Q03855 1755 aa9.43□□□□□ -0.9
PRC1YMR297W TY2B-DR3Q07791 1770 aaKnown RBP9.43□□□□□ -0.9
PRC1YMR297W TY2B-OR1Q12113 1770 aa9.43□□□□□ -0.9
PRC1YMR297W TY2B-DR1Q12472 1770 aa9.43□□□□□ -0.9
PRC1YMR297W TY2B-OR2Q12501 1770 aa9.43□□□□□ -0.9
PRC1YMR297W SLN1P39928 1220 aaPredicted RBP9.41□□□□□ -0.9
PRC1YMR297W PAF1P38351 445 aa9.41□□□□□ -0.9
PRC1YMR297W CDC45Q08032 650 aa9.41□□□□□ -0.9
PRC1YMR297W PDS5Q04264 1277 aa9.4□□□□□ -0.9
PRC1YMR297W GEA2P39993 1459 aaKnown RBP9.4□□□□□ -0.91
PRC1YMR297W NST1P53935 1240 aa9.39□□□□□ -0.91
PRC1YMR297W MIF2P35201 549 aa9.37□□□□□ -0.91
PRC1YMR297W VPS27P40343 622 aaKnown RBP9.37□□□□□ -0.91
PRC1YMR297W RVB2Q12464 471 aaKnown RBP9.37□□□□□ -0.91
PRC1YMR297W TY2B-BQ12491 1770 aa9.37□□□□□ -0.91
PRC1YMR297W RPP0P05317 312 aaKnown RBP9.37□□□□□ -0.91
PRC1YMR297W DJP1P40564 432 aa9.37□□□□□ -0.91
PRC1YMR297W YGR130CP53278 816 aa9.37□□□□□ -0.91
PRC1YMR297W GDB1Q06625 1536 aa9.35□□□□□ -0.91
PRC1YMR297W PCT1P13259 424 aa9.35□□□□□ -0.91
PRC1YMR297W TY3B-IQ7LHG5 1498 aaKnown RBP9.34□□□□□ -0.91
PRC1YMR297W EDE1P34216 1381 aa9.34□□□□□ -0.91
PRC1YMR297W SNT2P53127 1403 aa9.34□□□□□ -0.91
PRC1YMR297W CTR9P89105 1077 aa9.33□□□□□ -0.92
PRC1YMR297W CAT8P39113 1433 aa9.32□□□□□ -0.92
PRC1YMR297W VTH1P40438 1549 aa9.31□□□□□ -0.92
PRC1YMR297W VTH2P40890 1549 aa9.31□□□□□ -0.92
PRC1YMR297W RLF2Q12495 606 aa9.31□□□□□ -0.92
PRC1YMR297W MDS3P53094 1487 aa9.3□□□□□ -0.92
PRC1YMR297W NOT3P06102 836 aaKnown RBP9.29□□□□□ -0.92
PRC1YMR297W VPS24P36095 224 aaKnown RBP9.29□□□□□ -0.92
PRC1YMR297W NOP58Q12499 511 aaKnown RBP9.29□□□□□ -0.92
PRC1YMR297W ARO1P08566 1588 aaKnown RBP9.29□□□□□ -0.92
PRC1YMR297W NUP157P40064 1391 aaKnown RBP9.29□□□□□ -0.92
PRC1YMR297W MSP1P28737 362 aa9.28□□□□□ -0.92
PRC1YMR297W YRB30P53107 440 aaPredicted RBP9.28□□□□□ -0.92
PRC1YMR297W RPS0BP46654 252 aaKnown RBP9.27□□□□□ -0.93
PRC1YMR297W NAP1P25293 417 aaKnown RBP9.26□□□□□ -0.93
PRC1YMR297W KIP3P53086 805 aaKnown RBP9.26□□□□□ -0.93
PRC1YMR297W NOP53Q12080 455 aaKnown RBP9.26□□□□□ -0.93
PRC1YMR297W YPP1P46951 817 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-HO13535 1793 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-DR5P0C2I2 1755 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-DR6P0C2I3 1755 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-LR2P0C2I5 1755 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-LR3P0C2I6 1755 aaKnown RBP9.25□□□□□ -0.93
PRC1YMR297W TY1B-PR1P0C2I9 1755 aaKnown RBP9.25□□□□□ -0.93
PRC1YMR297W TY1B-PR2P0C2J0 1756 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-PR3P0C2J1 1755 aaKnown RBP9.25□□□□□ -0.93
PRC1YMR297W TY1B-JR1P47098 1755 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-ML2Q03434 1755 aaKnown RBP9.25□□□□□ -0.93
PRC1YMR297W TY1B-ER1Q03612 1755 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-ML1Q04711 1755 aaKnown RBP9.25□□□□□ -0.93
PRC1YMR297W TY1B-GR2Q12269 1755 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-OLQ12273 1755 aa9.25□□□□□ -0.93
PRC1YMR297W TY1B-PLQ12414 1755 aaKnown RBP9.25□□□□□ -0.93
PRC1YMR297W SPT21P35209 758 aa9.24□□□□□ -0.93
PRC1YMR297W KNS1P32350 737 aaPredicted RBP9.24□□□□□ -0.93
PRC1YMR297W ARL1P38116 183 aaKnown RBP9.24□□□□□ -0.93
PRC1YMR297W CWC22P53333 577 aaKnown RBP9.24□□□□□ -0.93
PRC1YMR297W TRM3Q07527 1436 aa9.23□□□□□ -0.93
PRC1YMR297W YDL144CQ07589 356 aa9.22□□□□□ -0.93
PRC1YMR297W IQG1Q12280 1495 aa9.22□□□□□ -0.93
PRC1YMR297W PDR12Q02785 1511 aa9.2□□□□□ -0.94
PRC1YMR297W SUI2P20459 304 aaKnown RBP9.2□□□□□ -0.94
PRC1YMR297W DNF2Q12675 1612 aa9.2□□□□□ -0.94
PRC1YMR297W LSP1Q12230 341 aaKnown RBP9.2□□□□□ -0.94
PRC1YMR297W BUD21Q08492 214 aaPredicted RBP9.17□□□□□ -0.94
PRC1YMR297W TY1B-BRQ12193 1756 aa9.16□□□□□ -0.94
PRC1YMR297W TY1B-GR3Q12316 1755 aa9.16□□□□□ -0.94
PRC1YMR297W TY1B-ORQ92393 1755 aa9.16□□□□□ -0.94
PRC1YMR297W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
PRC1YMR297W NUG1P40010 520 aaKnown RBP9.16□□□□□ -0.94
PRC1YMR297W CKB1P43639 278 aa9.16□□□□□ -0.94
PRC1YMR297W RNA1P11745 407 aaKnown RBP9.15□□□□□ -0.95
PRC1YMR297W RAD26P40352 1085 aa9.15□□□□□ -0.95
PRC1YMR297W TEA1P47988 759 aa9.15□□□□□ -0.95
PRC1YMR297W TY1B-JR2P47100 1755 aaKnown RBP9.14□□□□□ -0.95
PRC1YMR297W TY1B-ER2Q03619 1755 aa9.14□□□□□ -0.95
PRC1YMR297W TY1B-MR1Q04214 1755 aa9.14□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms