RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeastyeast

Gene CUE1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUE1YMR264W RPA190P10964 1664 aaKnown RBP17.48■□□□□ 0.39
CUE1YMR264W IFH1P39520 1085 aa17.46■□□□□ 0.39
CUE1YMR264W GEA1P47102 1408 aaPredicted RBP17.46■□□□□ 0.39
CUE1YMR264W DNF1P32660 1571 aa17.45■□□□□ 0.38
CUE1YMR264W SNT2P53127 1403 aa17.45■□□□□ 0.38
CUE1YMR264W NTE1Q04958 1679 aa17.42■□□□□ 0.38
CUE1YMR264W IKI3Q06706 1349 aaKnown RBP17.42■□□□□ 0.38
CUE1YMR264W RPO21P04050 1733 aaKnown RBP17.37■□□□□ 0.37
CUE1YMR264W NUP170P38181 1502 aa17.31■□□□□ 0.36
CUE1YMR264W TY3B-GQ99315 1547 aa17.28■□□□□ 0.36
CUE1YMR264W GEA2P39993 1459 aaKnown RBP17.28■□□□□ 0.36
CUE1YMR264W RTT106P40161 455 aa17.25■□□□□ 0.35
CUE1YMR264W NUP159P40477 1460 aa17.24■□□□□ 0.35
CUE1YMR264W IRC20Q06554 1556 aa17.23■□□□□ 0.35
CUE1YMR264W YBT1P32386 1661 aa17.22■□□□□ 0.35
CUE1YMR264W SSM4P40318 1319 aa17.18■□□□□ 0.34
CUE1YMR264W VPS15P22219 1454 aa17.16■□□□□ 0.34
CUE1YMR264W CAT8P39113 1433 aa17.13■□□□□ 0.33
CUE1YMR264W YRF1-1P0CX20 1796 aa17.11■□□□□ 0.33
CUE1YMR264W YRF1-5P0CX21 1796 aa17.11■□□□□ 0.33
CUE1YMR264W YRF1-8P0CX22 1796 aa17.11■□□□□ 0.33
CUE1YMR264W MET5P47169 1442 aa17.1■□□□□ 0.33
CUE1YMR264W PDR12Q02785 1511 aa17.05■□□□□ 0.32
CUE1YMR264W SPO14P36126 1683 aa17.04■□□□□ 0.32
CUE1YMR264W GDB1Q06625 1536 aa17.01■□□□□ 0.31
CUE1YMR264W MET10P39692 1035 aa17■□□□□ 0.31
CUE1YMR264W PDR10P51533 1564 aa17■□□□□ 0.31
CUE1YMR264W ARO1P08566 1588 aaKnown RBP16.97■□□□□ 0.31
CUE1YMR264W NUP157P40064 1391 aaKnown RBP16.94■□□□□ 0.3
CUE1YMR264W SRB8P25648 1427 aa16.9■□□□□ 0.3
CUE1YMR264W CKB1P43639 278 aa16.85■□□□□ 0.29
CUE1YMR264W BUD3P25558 1636 aa16.82■□□□□ 0.28
CUE1YMR264W IQG1Q12280 1495 aa16.76■□□□□ 0.27
CUE1YMR264W YSP2Q06681 1438 aa16.72■□□□□ 0.27
CUE1YMR264W GCN2P15442 1659 aa16.72■□□□□ 0.27
CUE1YMR264W MMS1Q06211 1407 aa16.7■□□□□ 0.26
CUE1YMR264W LTE1P07866 1435 aa16.69■□□□□ 0.26
CUE1YMR264W BUD21Q08492 214 aaPredicted RBP16.66■□□□□ 0.26
CUE1YMR264W SEC7P11075 2009 aaKnown RBP16.62■□□□□ 0.25
CUE1YMR264W BNR1P40450 1375 aa16.56■□□□□ 0.24
CUE1YMR264W DOP1Q03921 1698 aa16.56■□□□□ 0.24
CUE1YMR264W DRS2P39524 1355 aa16.51■□□□□ 0.23
CUE1YMR264W CHC1P22137 1653 aaKnown RBP16.51■□□□□ 0.23
CUE1YMR264W TRM3Q07527 1436 aa16.51■□□□□ 0.23
CUE1YMR264W YOR093CQ12275 1648 aa16.49■□□□□ 0.23
CUE1YMR264W NOP7P53261 605 aaKnown RBP16.43■□□□□ 0.22
CUE1YMR264W PDR5P33302 1511 aaKnown RBP16.4■□□□□ 0.22
CUE1YMR264W POL5P39985 1022 aaKnown RBP16.39■□□□□ 0.21
CUE1YMR264W PAF1P38351 445 aa16.37■□□□□ 0.21
CUE1YMR264W BNI1P41832 1953 aa16.37■□□□□ 0.21
CUE1YMR264W VMR1P38735 1592 aa16.32■□□□□ 0.2
CUE1YMR264W NUP188P52593 1655 aaKnown RBP16.31■□□□□ 0.2
CUE1YMR264W ITT1Q04638 464 aa16.31■□□□□ 0.2
CUE1YMR264W BFR2Q06631 534 aaKnown RBP16.27■□□□□ 0.2
CUE1YMR264W IML1P47170 1584 aa16.24■□□□□ 0.19
CUE1YMR264W DNF2Q12675 1612 aa16.23■□□□□ 0.19
CUE1YMR264W PDR11P40550 1411 aa16.22■□□□□ 0.19
CUE1YMR264W RAV1P47104 1357 aa16.22■□□□□ 0.19
CUE1YMR264W RTC1Q08281 1341 aa16.16■□□□□ 0.18
CUE1YMR264W URN1Q06525 465 aaKnown RBP16.07■□□□□ 0.16
CUE1YMR264W TY3B-IQ7LHG5 1498 aaKnown RBP16.06■□□□□ 0.16
CUE1YMR264W NUP192P47054 1683 aa16.04■□□□□ 0.16
CUE1YMR264W SEC3P33332 1336 aaKnown RBP16.03■□□□□ 0.16
CUE1YMR264W ORC1P54784 914 aaPredicted RBP16.03■□□□□ 0.16
CUE1YMR264W TAF5P38129 798 aa16.02■□□□□ 0.16
CUE1YMR264W IPL1P38991 367 aa16.02■□□□□ 0.16
CUE1YMR264W TYS1P36421 394 aaKnown RBP16■□□□□ 0.15
CUE1YMR264W MHP1P43638 1398 aa16■□□□□ 0.15
CUE1YMR264W NSR1P27476 414 aaKnown RBP RIP-Chip data15.99■□□□□ 0.15 RIP-Chip
CUE1YMR264W ESL2P36168 1195 aa15.98■□□□□ 0.15
CUE1YMR264W SPT7P35177 1332 aa15.96■□□□□ 0.15
CUE1YMR264W YAP3P38749 330 aa15.94■□□□□ 0.14
CUE1YMR264W ENP1P38333 483 aaKnown RBP15.92■□□□□ 0.14
CUE1YMR264W YLR419WQ06698 1435 aaKnown RBP15.91■□□□□ 0.14
CUE1YMR264W KIP3P53086 805 aaKnown RBP15.89■□□□□ 0.13
CUE1YMR264W DNF3Q12674 1656 aa15.86■□□□□ 0.13
CUE1YMR264W HAP1P0CE41 1502 aa15.86■□□□□ 0.13
CUE1YMR264W BCK1Q01389 1478 aa15.82■□□□□ 0.12
CUE1YMR264W RAD9P14737 1309 aa15.79■□□□□ 0.12
CUE1YMR264W SPE2P21182 396 aa15.79■□□□□ 0.12
CUE1YMR264W ALD4P46367 519 aaKnown RBP15.79■□□□□ 0.12
CUE1YMR264W SCT1P32784 759 aa15.78■□□□□ 0.12
CUE1YMR264W PSD2P53037 1138 aaKnown RBP15.78■□□□□ 0.12
CUE1YMR264W PDS5Q04264 1277 aa15.78■□□□□ 0.12
CUE1YMR264W LEU3P08638 886 aa15.76■□□□□ 0.11
CUE1YMR264W TAF8Q03750 510 aa15.74■□□□□ 0.11
CUE1YMR264W CAB1Q04430 367 aa15.72■□□□□ 0.11
CUE1YMR264W MLP1Q02455 1875 aaKnown RBP15.69■□□□□ 0.1
CUE1YMR264W NAP1P25293 417 aaKnown RBP15.69■□□□□ 0.1
CUE1YMR264W MRX12P47084 519 aa15.65■□□□□ 0.1
CUE1YMR264W ABP1P15891 592 aaKnown RBP15.64■□□□□ 0.09
CUE1YMR264W KRE5P22023 1365 aa15.63■□□□□ 0.09
CUE1YMR264W CHZ1P40019 153 aaPredicted RBP15.6■□□□□ 0.09
CUE1YMR264W MAK10Q02197 733 aa15.6■□□□□ 0.09
CUE1YMR264W NST1P53935 1240 aa15.58■□□□□ 0.08
CUE1YMR264W RIA1P53893 1110 aa15.57■□□□□ 0.08
CUE1YMR264W RTG3P38165 486 aa15.56■□□□□ 0.08
CUE1YMR264W CFT1Q06632 1357 aaKnown RBP15.55■□□□□ 0.08
CUE1YMR264W FKH1P40466 484 aa15.53■□□□□ 0.08
CUE1YMR264W PRS1P32895 427 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms