RNA–Protein interactions for RNA: YMR239C

RNT1, Transcript of Nuclear dsRNA-specific ribonuclease (RNase III), yeastyeast

Gene RNT1, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNT1YMR239C HTA1P04911 132 aaKnown RBP8.14□□□□□ -1.11
RNT1YMR239C HTA2P04912 132 aa8.14□□□□□ -1.11
RNT1YMR239C YDR344CQ05510 147 aa8.13□□□□□ -1.11
RNT1YMR239C RTG3P38165 486 aa8.12□□□□□ -1.11
RNT1YMR239C SSP1P38871 571 aa8.12□□□□□ -1.11
RNT1YMR239C YEL023CP39992 682 aa8.12□□□□□ -1.11
RNT1YMR239C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
RNT1YMR239C DCW1P36091 449 aa8.09□□□□□ -1.11
RNT1YMR239C SRC1Q03707 834 aa8.07□□□□□ -1.12
RNT1YMR239C ELP4Q02884 456 aaKnown RBP8.05□□□□□ -1.12
RNT1YMR239C PML39Q03760 334 aa7.99□□□□□ -1.13
RNT1YMR239C CST9Q06032 482 aa7.97□□□□□ -1.13
RNT1YMR239C ARH1P48360 493 aa7.95□□□□□ -1.14
RNT1YMR239C RCR1P38212 213 aa7.93□□□□□ -1.14
RNT1YMR239C MGA2P40578 1113 aa7.92□□□□□ -1.14
RNT1YMR239C SPT23P35210 1082 aa7.86□□□□□ -1.15
RNT1YMR239C MID1P41821 548 aa7.81□□□□□ -1.16
RNT1YMR239C GRE2Q12068 342 aaKnown RBP7.81□□□□□ -1.16
RNT1YMR239C NST1P53935 1240 aa7.75□□□□□ -1.17
RNT1YMR239C YML082WQ04533 649 aaKnown RBP7.75□□□□□ -1.17
RNT1YMR239C HAP5Q02516 242 aa7.73□□□□□ -1.17
RNT1YMR239C BNI4P53858 892 aa7.72□□□□□ -1.17
RNT1YMR239C RAS1P01119 309 aa7.7□□□□□ -1.18
RNT1YMR239C PEX29Q03370 554 aa7.7□□□□□ -1.18
RNT1YMR239C GUT1P32190 709 aa7.69□□□□□ -1.18
RNT1YMR239C PTC2P39966 464 aaKnown RBP7.68□□□□□ -1.18
RNT1YMR239C ATH1P48016 1211 aa7.67□□□□□ -1.18
RNT1YMR239C MPH3P0CE00 602 aa7.63□□□□□ -1.19
RNT1YMR239C SOL3P38858 249 aa7.63□□□□□ -1.19
RNT1YMR239C AI4P03878 556 aa7.61□□□□□ -1.19
RNT1YMR239C PTC3P34221 468 aaKnown RBP7.61□□□□□ -1.19
RNT1YMR239C TRK1P12685 1235 aa7.6□□□□□ -1.19
RNT1YMR239C EDS1P38073 919 aa7.58□□□□□ -1.2
RNT1YMR239C YPL062WQ02781 134 aa7.58□□□□□ -1.2
RNT1YMR239C MIF2P35201 549 aa7.57□□□□□ -1.2
RNT1YMR239C ILV3P39522 585 aaKnown RBP7.57□□□□□ -1.2
RNT1YMR239C MPC54Q08550 464 aa7.55□□□□□ -1.2
RNT1YMR239C AMS1P22855 1083 aa7.51□□□□□ -1.21
RNT1YMR239C NMA111P53920 997 aa7.51□□□□□ -1.21
RNT1YMR239C YPR015CQ12531 247 aa7.5□□□□□ -1.21
RNT1YMR239C MAK11P20484 414 aaKnown RBP7.49□□□□□ -1.21
RNT1YMR239C RAM2P29703 316 aa7.49□□□□□ -1.21
RNT1YMR239C RAM1P22007 431 aa7.44□□□□□ -1.22
RNT1YMR239C DPL1Q05567 589 aa7.4□□□□□ -1.22
RNT1YMR239C SDH2P21801 266 aa7.38□□□□□ -1.23
RNT1YMR239C YGR273CP53329 174 aa7.38□□□□□ -1.23
RNT1YMR239C GYP1Q08484 637 aa7.38□□□□□ -1.23
RNT1YMR239C COQ8P27697 501 aa7.37□□□□□ -1.23
RNT1YMR239C SLI15P38283 698 aa7.36□□□□□ -1.23
RNT1YMR239C SAS4Q04003 481 aa7.31□□□□□ -1.24
RNT1YMR239C ISU2Q12056 156 aa7.31□□□□□ -1.24
RNT1YMR239C YEL077CQ3E7X8 1277 aa7.27□□□□□ -1.25
RNT1YMR239C NOP53Q12080 455 aaKnown RBP7.24□□□□□ -1.25
RNT1YMR239C GAR1P28007 205 aaKnown RBP7.23□□□□□ -1.25
RNT1YMR239C BRE2P43132 505 aa7.23□□□□□ -1.25
RNT1YMR239C PDR1P12383 1068 aa7.2□□□□□ -1.26
RNT1YMR239C GBP2P25555 427 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
RNT1YMR239C SET1P38827 1080 aaKnown RBP7.18□□□□□ -1.26
RNT1YMR239C CDC73Q06697 393 aa7.18□□□□□ -1.26
RNT1YMR239C GCR2Q01722 534 aa7.17□□□□□ -1.26
RNT1YMR239C MRF1P30775 413 aaPredicted RBP7.16□□□□□ -1.26
RNT1YMR239C KEX1P09620 729 aa7.12□□□□□ -1.27
RNT1YMR239C AIR1P40507 360 aaKnown RBP7.11□□□□□ -1.27
RNT1YMR239C CLA4P48562 842 aa7.06□□□□□ -1.28
RNT1YMR239C BUD20Q08004 166 aaPredicted RBP7.06□□□□□ -1.28
RNT1YMR239C PRT1P06103 763 aaKnown RBP7.03□□□□□ -1.28
RNT1YMR239C MET22P32179 357 aa7.03□□□□□ -1.28
RNT1YMR239C IFH1P39520 1085 aa7.03□□□□□ -1.28
RNT1YMR239C ERG12P07277 443 aa7.01□□□□□ -1.29
RNT1YMR239C CST6P40535 587 aa7.01□□□□□ -1.29
RNT1YMR239C ENV9Q08651 330 aa7.01□□□□□ -1.29
RNT1YMR239C VHR2P40041 505 aa7.01□□□□□ -1.29
RNT1YMR239C YLR326WQ06170 240 aaKnown RBP6.98□□□□□ -1.29
RNT1YMR239C UBP14P38237 781 aaKnown RBP6.96□□□□□ -1.3
RNT1YMR239C DMA1P38823 416 aa6.96□□□□□ -1.3
RNT1YMR239C LAM6Q08001 693 aa6.96□□□□□ -1.3
RNT1YMR239C RQC2Q12532 1038 aaKnown RBP6.96□□□□□ -1.3
RNT1YMR239C CDC4P07834 779 aa6.95□□□□□ -1.3
RNT1YMR239C RAD54P32863 898 aa6.94□□□□□ -1.3
RNT1YMR239C STR2P47164 639 aa6.94□□□□□ -1.3
RNT1YMR239C PCS60P38137 543 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
RNT1YMR239C VPS70P47161 811 aa6.93□□□□□ -1.3
RNT1YMR239C YPR148CQ06523 435 aa6.93□□□□□ -1.3
RNT1YMR239C RPP1BP10622 106 aaKnown RBP6.92□□□□□ -1.3
RNT1YMR239C KIC1P38692 1080 aa6.92□□□□□ -1.3
RNT1YMR239C YDL176WQ12027 708 aa6.92□□□□□ -1.3
RNT1YMR239C ISM1P48526 1002 aa6.91□□□□□ -1.3
RNT1YMR239C YDR444WQ04093 687 aa6.91□□□□□ -1.3
RNT1YMR239C REF2P42073 533 aaPredicted RBP6.89□□□□□ -1.31
RNT1YMR239C YRR1Q12172 810 aa6.89□□□□□ -1.31
RNT1YMR239C YDR090CQ03193 310 aa6.86□□□□□ -1.31
RNT1YMR239C FRK1Q03002 865 aaPredicted RBP6.84□□□□□ -1.31
RNT1YMR239C MTC5Q03897 1148 aa6.84□□□□□ -1.31
RNT1YMR239C LCB5Q06147 687 aaKnown RBP6.84□□□□□ -1.32
RNT1YMR239C NUD1P32336 851 aa6.82□□□□□ -1.32
RNT1YMR239C SPT16P32558 1035 aaKnown RBP6.81□□□□□ -1.32
RNT1YMR239C TY1A-DR4O74302 440 aa6.8□□□□□ -1.32
RNT1YMR239C TY1A-HP0C2I4 478 aaKnown RBP6.8□□□□□ -1.32
RNT1YMR239C TY1A-AP0CX57 440 aa6.8□□□□□ -1.32
RNT1YMR239C TY1A-PR1P0CX58 440 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms