RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W CAB3P36076 571 aa7.15□□□□□ -1.26
SPG4YMR107W SRB8P25648 1427 aa7.14□□□□□ -1.27
SPG4YMR107W RKR1Q04781 1562 aa7.14□□□□□ -1.27
SPG4YMR107W TY3B-GQ99315 1547 aa7.14□□□□□ -1.27
SPG4YMR107W ATG2P53855 1592 aa7.13□□□□□ -1.27
SPG4YMR107W TSC11P40061 1430 aa7.13□□□□□ -1.27
SPG4YMR107W SEC3P33332 1336 aaKnown RBP7.13□□□□□ -1.27
SPG4YMR107W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
SPG4YMR107W RPO31P04051 1460 aa7.11□□□□□ -1.27
SPG4YMR107W TGL3P40308 642 aa7.11□□□□□ -1.27
SPG4YMR107W KOG1P38873 1557 aa7.11□□□□□ -1.27
SPG4YMR107W GEA1P47102 1408 aaPredicted RBP7.1□□□□□ -1.27
SPG4YMR107W SMC4Q12267 1418 aa7.1□□□□□ -1.27
SPG4YMR107W IME2P32581 645 aa7.08□□□□□ -1.28
SPG4YMR107W ULS1Q08562 1619 aa7.08□□□□□ -1.28
SPG4YMR107W CFT1Q06632 1357 aaKnown RBP7.08□□□□□ -1.28
SPG4YMR107W OPY1P38271 328 aa7.07□□□□□ -1.28
SPG4YMR107W PSD2P53037 1138 aaKnown RBP7.07□□□□□ -1.28
SPG4YMR107W TOP2P06786 1428 aaKnown RBP7.07□□□□□ -1.28
SPG4YMR107W RTT106P40161 455 aa7.06□□□□□ -1.28
SPG4YMR107W TY1B-DR3Q99231 1755 aa7.05□□□□□ -1.28
SPG4YMR107W PDR15Q04182 1529 aaKnown RBP7.05□□□□□ -1.28
SPG4YMR107W ESC1Q03661 1658 aaKnown RBP7.04□□□□□ -1.28
SPG4YMR107W PAN1P32521 1480 aa7.03□□□□□ -1.28
SPG4YMR107W TAF7Q05021 590 aa7.02□□□□□ -1.29
SPG4YMR107W VPS15P22219 1454 aa7.01□□□□□ -1.29
SPG4YMR107W TY2B-LR1P0C2J3 1770 aa7□□□□□ -1.29
SPG4YMR107W TY2B-FP0CX63 1770 aa7□□□□□ -1.29
SPG4YMR107W TY2B-GR2P0CX64 1770 aa7□□□□□ -1.29
SPG4YMR107W TY2B-CP25384 1770 aa7□□□□□ -1.29
SPG4YMR107W TY2B-DR2Q03494 1770 aa7□□□□□ -1.29
SPG4YMR107W TY1B-DR1Q03855 1755 aa7□□□□□ -1.29
SPG4YMR107W TY2B-DR3Q07791 1770 aaKnown RBP7□□□□□ -1.29
SPG4YMR107W TY2B-OR1Q12113 1770 aa7□□□□□ -1.29
SPG4YMR107W TY2B-DR1Q12472 1770 aa7□□□□□ -1.29
SPG4YMR107W TY2B-OR2Q12501 1770 aa7□□□□□ -1.29
SPG4YMR107W MGA2P40578 1113 aa7□□□□□ -1.29
SPG4YMR107W CST9Q06032 482 aa6.98□□□□□ -1.29
SPG4YMR107W NUP159P40477 1460 aa6.97□□□□□ -1.29
SPG4YMR107W TY2B-BQ12491 1770 aa6.96□□□□□ -1.3
SPG4YMR107W IRC20Q06554 1556 aa6.95□□□□□ -1.3
SPG4YMR107W SNT2P53127 1403 aa6.95□□□□□ -1.3
SPG4YMR107W MRM1P25270 412 aa6.95□□□□□ -1.3
SPG4YMR107W PDR5P33302 1511 aaKnown RBP6.95□□□□□ -1.3
SPG4YMR107W YBT1P32386 1661 aa6.93□□□□□ -1.3
SPG4YMR107W DNF1P32660 1571 aa6.92□□□□□ -1.3
SPG4YMR107W CLC1P17891 233 aa6.92□□□□□ -1.3
SPG4YMR107W TCB2P48231 1178 aa6.91□□□□□ -1.3
SPG4YMR107W IFH1P39520 1085 aa6.89□□□□□ -1.31
SPG4YMR107W MHP1P43638 1398 aa6.89□□□□□ -1.31
SPG4YMR107W SIS2P36024 562 aa6.88□□□□□ -1.31
SPG4YMR107W TY1B-HO13535 1793 aa6.87□□□□□ -1.31
SPG4YMR107W TY1B-DR5P0C2I2 1755 aa6.87□□□□□ -1.31
SPG4YMR107W TY1B-DR6P0C2I3 1755 aa6.87□□□□□ -1.31
SPG4YMR107W TY1B-LR2P0C2I5 1755 aa6.87□□□□□ -1.31
SPG4YMR107W TY1B-LR3P0C2I6 1755 aaKnown RBP6.87□□□□□ -1.31
SPG4YMR107W TY1B-PR1P0C2I9 1755 aaKnown RBP6.87□□□□□ -1.31
SPG4YMR107W TY1B-PR2P0C2J0 1756 aa6.87□□□□□ -1.31
SPG4YMR107W TY1B-PR3P0C2J1 1755 aaKnown RBP6.87□□□□□ -1.31
SPG4YMR107W TY1B-JR1P47098 1755 aa6.87□□□□□ -1.31
SPG4YMR107W TY1B-ML2Q03434 1755 aaKnown RBP6.87□□□□□ -1.31
SPG4YMR107W TY1B-ER1Q03612 1755 aa6.87□□□□□ -1.31
SPG4YMR107W TY1B-ML1Q04711 1755 aaKnown RBP6.87□□□□□ -1.31
SPG4YMR107W TY1B-GR2Q12269 1755 aa6.87□□□□□ -1.31
SPG4YMR107W TY1B-OLQ12273 1755 aa6.87□□□□□ -1.31
SPG4YMR107W TY1B-PLQ12414 1755 aaKnown RBP6.87□□□□□ -1.31
SPG4YMR107W BUD31P25337 157 aaPredicted RBP6.87□□□□□ -1.31
SPG4YMR107W YAP5P40574 245 aa6.87□□□□□ -1.31
SPG4YMR107W NST1P53935 1240 aa6.87□□□□□ -1.31
SPG4YMR107W YIR014WP40570 242 aa6.86□□□□□ -1.31
SPG4YMR107W YOR238WQ08634 303 aa6.86□□□□□ -1.31
SPG4YMR107W TY3B-IQ7LHG5 1498 aaKnown RBP6.85□□□□□ -1.31
SPG4YMR107W GCN2P15442 1659 aa6.85□□□□□ -1.31
SPG4YMR107W GDB1Q06625 1536 aa6.85□□□□□ -1.31
SPG4YMR107W MST1P07236 462 aa6.84□□□□□ -1.31
SPG4YMR107W LEU3P08638 886 aa6.84□□□□□ -1.31
SPG4YMR107W RPC31P17890 251 aa6.84□□□□□ -1.31
SPG4YMR107W GEA2P39993 1459 aaKnown RBP6.84□□□□□ -1.31
SPG4YMR107W TY1B-BRQ12193 1756 aa6.83□□□□□ -1.32
SPG4YMR107W TY1B-GR3Q12316 1755 aa6.83□□□□□ -1.32
SPG4YMR107W TY1B-ORQ92393 1755 aa6.83□□□□□ -1.32
SPG4YMR107W PDR12Q02785 1511 aa6.82□□□□□ -1.32
SPG4YMR107W RTG3P38165 486 aa6.82□□□□□ -1.32
SPG4YMR107W RQC2Q12532 1038 aaKnown RBP6.82□□□□□ -1.32
SPG4YMR107W ABP1P15891 592 aaKnown RBP6.81□□□□□ -1.32
SPG4YMR107W UBP9P39967 754 aa6.81□□□□□ -1.32
SPG4YMR107W SNF7P39929 240 aaKnown RBP6.8□□□□□ -1.32
SPG4YMR107W YFR016CP43597 1233 aaKnown RBP6.8□□□□□ -1.32
SPG4YMR107W RCR1P38212 213 aa6.79□□□□□ -1.32
SPG4YMR107W FUN12P39730 1002 aaKnown RBP6.79□□□□□ -1.32
SPG4YMR107W VTH1P40438 1549 aa6.79□□□□□ -1.32
SPG4YMR107W VTH2P40890 1549 aa6.79□□□□□ -1.32
SPG4YMR107W TY1B-JR2P47100 1755 aaKnown RBP6.79□□□□□ -1.32
SPG4YMR107W TY1B-ER2Q03619 1755 aa6.79□□□□□ -1.32
SPG4YMR107W TY1B-MR1Q04214 1755 aa6.79□□□□□ -1.32
SPG4YMR107W TY1B-MR2Q04670 1755 aaKnown RBP6.79□□□□□ -1.32
SPG4YMR107W TY1B-LR1Q12088 1755 aaKnown RBP6.79□□□□□ -1.32
SPG4YMR107W TY1B-NL1Q12112 1755 aa6.79□□□□□ -1.32
SPG4YMR107W TY1B-GR1Q12141 1755 aa6.79□□□□□ -1.32
SPG4YMR107W TY1B-BLQ12490 1755 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms