RNA–Protein interactions for RNA: YLR298C

YHC1, Transcript of Component of the U1 snRNP complex required for pre-mRNA splicing, yeastyeast

Gene YHC1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHC1YLR298C YEL023CP39992 682 aa8.9□□□□□ -0.98
YHC1YLR298C SAP30P38429 201 aa8.88□□□□□ -0.99
YHC1YLR298C PTC4P38089 393 aa8.87□□□□□ -0.99
YHC1YLR298C GRE2Q12068 342 aaKnown RBP8.87□□□□□ -0.99
YHC1YLR298C MIF2P35201 549 aa8.86□□□□□ -0.99
YHC1YLR298C EDS1P38073 919 aa8.86□□□□□ -0.99
YHC1YLR298C YDL129WQ07555 291 aa8.86□□□□□ -0.99
YHC1YLR298C PTC3P34221 468 aaKnown RBP8.82□□□□□ -1
YHC1YLR298C ATH1P48016 1211 aa8.79□□□□□ -1
YHC1YLR298C COQ8P27697 501 aa8.78□□□□□ -1
YHC1YLR298C GUT1P32190 709 aa8.77□□□□□ -1.01
YHC1YLR298C CHL1P22516 861 aaPredicted RBP8.74□□□□□ -1.01
YHC1YLR298C PRE3P38624 215 aa8.74□□□□□ -1.01
YHC1YLR298C NST1P53935 1240 aa8.73□□□□□ -1.01
YHC1YLR298C PML39Q03760 334 aa8.72□□□□□ -1.01
YHC1YLR298C YDR344CQ05510 147 aa8.71□□□□□ -1.02
YHC1YLR298C BCK2P33306 851 aa8.69□□□□□ -1.02
YHC1YLR298C SOL3P38858 249 aa8.69□□□□□ -1.02
YHC1YLR298C ILV3P39522 585 aaKnown RBP8.62□□□□□ -1.03
YHC1YLR298C MID1P41821 548 aa8.62□□□□□ -1.03
YHC1YLR298C AI4P03878 556 aa8.61□□□□□ -1.03
YHC1YLR298C MPH3P0CE00 602 aa8.61□□□□□ -1.03
YHC1YLR298C ELP4Q02884 456 aaKnown RBP8.6□□□□□ -1.03
YHC1YLR298C NOP53Q12080 455 aaKnown RBP8.6□□□□□ -1.03
YHC1YLR298C ARH1P48360 493 aa8.57□□□□□ -1.04
YHC1YLR298C YGR273CP53329 174 aa8.56□□□□□ -1.04
YHC1YLR298C VRP1P37370 817 aa8.54□□□□□ -1.04
YHC1YLR298C PEX29Q03370 554 aa8.53□□□□□ -1.04
YHC1YLR298C XDJ1P39102 459 aa8.48□□□□□ -1.05
YHC1YLR298C SPT23P35210 1082 aa8.46□□□□□ -1.06
YHC1YLR298C HAP5Q02516 242 aa8.46□□□□□ -1.06
YHC1YLR298C MPC54Q08550 464 aa8.45□□□□□ -1.06
YHC1YLR298C SLI15P38283 698 aa8.43□□□□□ -1.06
YHC1YLR298C SET1P38827 1080 aaKnown RBP8.41□□□□□ -1.06
YHC1YLR298C BNI4P53858 892 aa8.41□□□□□ -1.06
YHC1YLR298C KEX1P09620 729 aa8.39□□□□□ -1.07
YHC1YLR298C NMA111P53920 997 aa8.37□□□□□ -1.07
YHC1YLR298C PTC2P39966 464 aaKnown RBP8.36□□□□□ -1.07
YHC1YLR298C DPL1Q05567 589 aa8.36□□□□□ -1.07
YHC1YLR298C YML082WQ04533 649 aaKnown RBP8.34□□□□□ -1.07
YHC1YLR298C YLR326WQ06170 240 aaKnown RBP8.33□□□□□ -1.08
YHC1YLR298C DPS1P04802 557 aaKnown RBP8.32□□□□□ -1.08
YHC1YLR298C UBP14P38237 781 aaKnown RBP8.3□□□□□ -1.08
YHC1YLR298C VHR2P40041 505 aa8.3□□□□□ -1.08
YHC1YLR298C CDC73Q06697 393 aa8.28□□□□□ -1.08
YHC1YLR298C YPR015CQ12531 247 aa8.26□□□□□ -1.09
YHC1YLR298C PCS60P38137 543 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
YHC1YLR298C ISU2Q12056 156 aa8.25□□□□□ -1.09
YHC1YLR298C RAM1P22007 431 aa8.24□□□□□ -1.09
YHC1YLR298C RAD54P32863 898 aa8.22□□□□□ -1.09
YHC1YLR298C IFH1P39520 1085 aa8.18□□□□□ -1.1
YHC1YLR298C YDR090CQ03193 310 aa8.18□□□□□ -1.1
YHC1YLR298C PDR1P12383 1068 aa8.17□□□□□ -1.1
YHC1YLR298C SRC1Q03707 834 aa8.17□□□□□ -1.1
YHC1YLR298C YPR148CQ06523 435 aa8.15□□□□□ -1.1
YHC1YLR298C RPP1BP10622 106 aaKnown RBP8.11□□□□□ -1.11
YHC1YLR298C KIC1P38692 1080 aa8.1□□□□□ -1.11
YHC1YLR298C GYP1Q08484 637 aa8.1□□□□□ -1.11
YHC1YLR298C RAS1P01119 309 aa8.09□□□□□ -1.11
YHC1YLR298C REF2P42073 533 aaPredicted RBP8.08□□□□□ -1.12
YHC1YLR298C GAP1P19145 602 aaPredicted RBP8.07□□□□□ -1.12
YHC1YLR298C SDH2P21801 266 aa8.06□□□□□ -1.12
YHC1YLR298C YRR1Q12172 810 aa8.04□□□□□ -1.12
YHC1YLR298C AMS1P22855 1083 aa8.03□□□□□ -1.12
YHC1YLR298C VPS70P47161 811 aa8.03□□□□□ -1.12
YHC1YLR298C SAS4Q04003 481 aa8.03□□□□□ -1.12
YHC1YLR298C PEX21P50091 288 aa8.02□□□□□ -1.13
YHC1YLR298C ORC6P38826 435 aa8.01□□□□□ -1.13
YHC1YLR298C CSC1Q06538 782 aa8.01□□□□□ -1.13
YHC1YLR298C TFB4Q12004 338 aa8□□□□□ -1.13
YHC1YLR298C STR2P47164 639 aa7.99□□□□□ -1.13
YHC1YLR298C BUD20Q08004 166 aaPredicted RBP7.99□□□□□ -1.13
YHC1YLR298C TUM1Q08686 304 aaKnown RBP7.98□□□□□ -1.13
YHC1YLR298C COX6P00427 148 aa7.96□□□□□ -1.14
YHC1YLR298C ISM1P48526 1002 aa7.96□□□□□ -1.14
YHC1YLR298C NUD1P32336 851 aa7.95□□□□□ -1.14
YHC1YLR298C MAK21Q12176 1025 aaKnown RBP7.95□□□□□ -1.14
YHC1YLR298C PRT1P06103 763 aaKnown RBP7.94□□□□□ -1.14
YHC1YLR298C YEL077CQ3E7X8 1277 aa7.92□□□□□ -1.14
YHC1YLR298C TRK1P12685 1235 aa7.9□□□□□ -1.14
YHC1YLR298C MRF1P30775 413 aaPredicted RBP7.9□□□□□ -1.14
YHC1YLR298C MVP1P40959 511 aaKnown RBP7.9□□□□□ -1.14
YHC1YLR298C TY1A-DR4O74302 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-HP0C2I4 478 aaKnown RBP7.88□□□□□ -1.15
YHC1YLR298C TY1A-AP0CX57 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-PR1P0CX58 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-ORP0CX59 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-PR2P0CX60 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-DR5P0CX65 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-ER2P0CX66 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-GR3P0CX67 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-LR1P0CX68 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-MR2P0CX69 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-JR2P47099 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-DR1Q03856 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-ML1Q04706 440 aaKnown RBP7.88□□□□□ -1.15
YHC1YLR298C TY1A-BRQ12217 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-NL2Q12470 440 aa7.88□□□□□ -1.15
YHC1YLR298C TY1A-GR2Q12485 440 aa7.88□□□□□ -1.15
YHC1YLR298C NPL4P33755 580 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms