RNA–Protein interactions for RNA: YLL046C

RNP1, Transcript of Ribonucleoprotein that contains two RNA recognition motifs (RRM), yeastyeast

Gene RNP1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNP1YLL046C YEL023CP39992 682 aa9.64□□□□□ -0.87
RNP1YLL046C DCW1P36091 449 aa9.63□□□□□ -0.87
RNP1YLL046C TFA1P36100 482 aa9.61□□□□□ -0.87
RNP1YLL046C CST9Q06032 482 aa9.6□□□□□ -0.87
RNP1YLL046C SSP1P38871 571 aa9.58□□□□□ -0.88
RNP1YLL046C DPS1P04802 557 aaKnown RBP9.56□□□□□ -0.88
RNP1YLL046C ELP4Q02884 456 aaKnown RBP9.54□□□□□ -0.88
RNP1YLL046C MGA2P40578 1113 aa9.53□□□□□ -0.88
RNP1YLL046C RCR1P38212 213 aa9.49□□□□□ -0.89
RNP1YLL046C PML39Q03760 334 aa9.47□□□□□ -0.89
RNP1YLL046C YDR344CQ05510 147 aa9.45□□□□□ -0.9
RNP1YLL046C RGA2Q06407 1009 aa9.44□□□□□ -0.9
RNP1YLL046C GRE2Q12068 342 aaKnown RBP9.37□□□□□ -0.91
RNP1YLL046C ARH1P48360 493 aa9.35□□□□□ -0.91
RNP1YLL046C SPT23P35210 1082 aa9.27□□□□□ -0.93
RNP1YLL046C RGA1P39083 1007 aa9.27□□□□□ -0.93
RNP1YLL046C PEX29Q03370 554 aa9.27□□□□□ -0.93
RNP1YLL046C MID1P41821 548 aa9.25□□□□□ -0.93
RNP1YLL046C ATH1P48016 1211 aa9.25□□□□□ -0.93
RNP1YLL046C SRC1Q03707 834 aa9.25□□□□□ -0.93
RNP1YLL046C GUT1P32190 709 aa9.2□□□□□ -0.94
RNP1YLL046C MIF2P35201 549 aa9.2□□□□□ -0.94
RNP1YLL046C HAP5Q02516 242 aa9.17□□□□□ -0.94
RNP1YLL046C PTC2P39966 464 aaKnown RBP9.13□□□□□ -0.95
RNP1YLL046C PTC3P34221 468 aaKnown RBP9.12□□□□□ -0.95
RNP1YLL046C BNI4P53858 892 aa9.12□□□□□ -0.95
RNP1YLL046C NST1P53935 1240 aa9.08□□□□□ -0.96
RNP1YLL046C YML082WQ04533 649 aaKnown RBP9.08□□□□□ -0.96
RNP1YLL046C AI4P03878 556 aa9.06□□□□□ -0.96
RNP1YLL046C MPH3P0CE00 602 aa9.05□□□□□ -0.96
RNP1YLL046C MAK11P20484 414 aaKnown RBP9.05□□□□□ -0.96
RNP1YLL046C EDS1P38073 919 aa9.05□□□□□ -0.96
RNP1YLL046C SOL3P38858 249 aa9□□□□□ -0.97
RNP1YLL046C RAS1P01119 309 aa8.97□□□□□ -0.97
RNP1YLL046C MPC54Q08550 464 aa8.97□□□□□ -0.97
RNP1YLL046C ILV3P39522 585 aaKnown RBP8.93□□□□□ -0.98
RNP1YLL046C NMA111P53920 997 aa8.92□□□□□ -0.98
RNP1YLL046C COQ8P27697 501 aa8.91□□□□□ -0.98
RNP1YLL046C TRK1P12685 1235 aa8.9□□□□□ -0.98
RNP1YLL046C RAM2P29703 316 aa8.88□□□□□ -0.99
RNP1YLL046C DPL1Q05567 589 aa8.84□□□□□ -0.99
RNP1YLL046C AMS1P22855 1083 aa8.83□□□□□ -1
RNP1YLL046C YGR273CP53329 174 aa8.83□□□□□ -1
RNP1YLL046C GYP1Q08484 637 aa8.83□□□□□ -1
RNP1YLL046C YPR015CQ12531 247 aa8.8□□□□□ -1
RNP1YLL046C SLI15P38283 698 aa8.79□□□□□ -1
RNP1YLL046C YPL062WQ02781 134 aa8.73□□□□□ -1.01
RNP1YLL046C ISU2Q12056 156 aa8.72□□□□□ -1.01
RNP1YLL046C RAM1P22007 431 aa8.71□□□□□ -1.02
RNP1YLL046C NOP53Q12080 455 aaKnown RBP8.71□□□□□ -1.02
RNP1YLL046C SAS4Q04003 481 aa8.68□□□□□ -1.02
RNP1YLL046C YEL077CQ3E7X8 1277 aa8.67□□□□□ -1.02
RNP1YLL046C SDH2P21801 266 aa8.59□□□□□ -1.03
RNP1YLL046C GBP2P25555 427 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
RNP1YLL046C CDC73Q06697 393 aa8.58□□□□□ -1.04
RNP1YLL046C KEX1P09620 729 aa8.57□□□□□ -1.04
RNP1YLL046C PDR1P12383 1068 aa8.57□□□□□ -1.04
RNP1YLL046C MRF1P30775 413 aaPredicted RBP8.57□□□□□ -1.04
RNP1YLL046C GAR1P28007 205 aaKnown RBP8.54□□□□□ -1.04
RNP1YLL046C BRE2P43132 505 aa8.52□□□□□ -1.05
RNP1YLL046C GCR2Q01722 534 aa8.51□□□□□ -1.05
RNP1YLL046C RPP1BP10622 106 aaKnown RBP8.47□□□□□ -1.05
RNP1YLL046C ERG12P07277 443 aa8.44□□□□□ -1.06
RNP1YLL046C PRT1P06103 763 aaKnown RBP8.41□□□□□ -1.06
RNP1YLL046C AIR1P40507 360 aaKnown RBP8.39□□□□□ -1.07
RNP1YLL046C YLR326WQ06170 240 aaKnown RBP8.38□□□□□ -1.07
RNP1YLL046C BUD20Q08004 166 aaPredicted RBP8.37□□□□□ -1.07
RNP1YLL046C VHR2P40041 505 aa8.36□□□□□ -1.07
RNP1YLL046C RAD54P32863 898 aa8.35□□□□□ -1.07
RNP1YLL046C PCS60P38137 543 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
RNP1YLL046C PEX21P50091 288 aa8.33□□□□□ -1.08
RNP1YLL046C UBP14P38237 781 aaKnown RBP8.32□□□□□ -1.08
RNP1YLL046C YRR1Q12172 810 aa8.31□□□□□ -1.08
RNP1YLL046C CST6P40535 587 aa8.3□□□□□ -1.08
RNP1YLL046C CLA4P48562 842 aa8.3□□□□□ -1.08
RNP1YLL046C STR2P47164 639 aa8.28□□□□□ -1.08
RNP1YLL046C ISM1P48526 1002 aa8.25□□□□□ -1.09
RNP1YLL046C SPT16P32558 1035 aaKnown RBP8.24□□□□□ -1.09
RNP1YLL046C NPL4P33755 580 aa8.24□□□□□ -1.09
RNP1YLL046C LAM6Q08001 693 aa8.24□□□□□ -1.09
RNP1YLL046C CDC4P07834 779 aa8.23□□□□□ -1.09
RNP1YLL046C MET22P32179 357 aa8.23□□□□□ -1.09
RNP1YLL046C FRK1Q03002 865 aaPredicted RBP8.23□□□□□ -1.09
RNP1YLL046C NUD1P32336 851 aa8.22□□□□□ -1.09
RNP1YLL046C ENV9Q08651 330 aa8.22□□□□□ -1.09
RNP1YLL046C KIC1P38692 1080 aa8.2□□□□□ -1.1
RNP1YLL046C SET1P38827 1080 aaKnown RBP8.18□□□□□ -1.1
RNP1YLL046C TUM1Q08686 304 aaKnown RBP8.18□□□□□ -1.1
RNP1YLL046C GCD11P32481 527 aaKnown RBP8.17□□□□□ -1.1
RNP1YLL046C YDR444WQ04093 687 aa8.17□□□□□ -1.1
RNP1YLL046C TFB4Q12004 338 aa8.17□□□□□ -1.1
RNP1YLL046C CSC1Q06538 782 aa8.16□□□□□ -1.1
RNP1YLL046C BDP1P46678 594 aa8.12□□□□□ -1.11
RNP1YLL046C GAP1P19145 602 aaPredicted RBP8.1□□□□□ -1.11
RNP1YLL046C PAT1P25644 796 aaKnown RBP8.1□□□□□ -1.11
RNP1YLL046C IFH1P39520 1085 aa8.1□□□□□ -1.11
RNP1YLL046C HED1Q03937 162 aa8.1□□□□□ -1.11
RNP1YLL046C TY1A-DR4O74302 440 aa8.09□□□□□ -1.11
RNP1YLL046C TY1A-HP0C2I4 478 aaKnown RBP8.09□□□□□ -1.11
RNP1YLL046C TY1A-AP0CX57 440 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms