RNA–Protein interactions for RNA: YKR039W

GAP1, Transcript of General amino acid permease, yeastyeast

Gene GAP1, Length 1,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAP1YKR039W RPA190P10964 1664 aaKnown RBP14.66□□□□□ -0.06
GAP1YKR039W SNT2P53127 1403 aa14.65□□□□□ -0.06
GAP1YKR039W IFH1P39520 1085 aa14.64□□□□□ -0.07
GAP1YKR039W ULS1Q08562 1619 aa14.62□□□□□ -0.07
GAP1YKR039W GEA1P47102 1408 aaPredicted RBP14.58□□□□□ -0.08
GAP1YKR039W RTT106P40161 455 aa14.56□□□□□ -0.08
GAP1YKR039W NTE1Q04958 1679 aa14.54□□□□□ -0.08
GAP1YKR039W NUP159P40477 1460 aa14.52□□□□□ -0.08
GAP1YKR039W MET5P47169 1442 aa14.51□□□□□ -0.09
GAP1YKR039W RPO21P04050 1733 aaKnown RBP14.51□□□□□ -0.09
GAP1YKR039W IKI3Q06706 1349 aaKnown RBP14.5□□□□□ -0.09
GAP1YKR039W GEA2P39993 1459 aaKnown RBP14.49□□□□□ -0.09
GAP1YKR039W MET10P39692 1035 aa14.4□□□□□ -0.1
GAP1YKR039W VPS15P22219 1454 aa14.4□□□□□ -0.1
GAP1YKR039W IRC20Q06554 1556 aa14.39□□□□□ -0.11
GAP1YKR039W TY3B-GQ99315 1547 aa14.39□□□□□ -0.11
GAP1YKR039W YRF1-1P0CX20 1796 aa14.35□□□□□ -0.11
GAP1YKR039W YRF1-5P0CX21 1796 aa14.35□□□□□ -0.11
GAP1YKR039W YRF1-8P0CX22 1796 aa14.35□□□□□ -0.11
GAP1YKR039W CAT8P39113 1433 aa14.35□□□□□ -0.11
GAP1YKR039W NUP170P38181 1502 aa14.35□□□□□ -0.11
GAP1YKR039W PDR12Q02785 1511 aa14.32□□□□□ -0.12
GAP1YKR039W SSM4P40318 1319 aa14.29□□□□□ -0.12
GAP1YKR039W YBT1P32386 1661 aa14.28□□□□□ -0.12
GAP1YKR039W SPO14P36126 1683 aa14.26□□□□□ -0.13
GAP1YKR039W NUP157P40064 1391 aaKnown RBP14.25□□□□□ -0.13
GAP1YKR039W PDR10P51533 1564 aa14.25□□□□□ -0.13
GAP1YKR039W GDB1Q06625 1536 aa14.23□□□□□ -0.13
GAP1YKR039W LTE1P07866 1435 aa14.18□□□□□ -0.14
GAP1YKR039W CKB1P43639 278 aa14.18□□□□□ -0.14
GAP1YKR039W ARO1P08566 1588 aaKnown RBP14.16□□□□□ -0.14
GAP1YKR039W SRB8P25648 1427 aa14.15□□□□□ -0.14
GAP1YKR039W IQG1Q12280 1495 aa14.1□□□□□ -0.15
GAP1YKR039W YSP2Q06681 1438 aa14.06□□□□□ -0.16
GAP1YKR039W BUD3P25558 1636 aa14.05□□□□□ -0.16
GAP1YKR039W DRS2P39524 1355 aa14.01□□□□□ -0.17
GAP1YKR039W MMS1Q06211 1407 aa14.01□□□□□ -0.17
GAP1YKR039W BUD21Q08492 214 aaPredicted RBP14.01□□□□□ -0.17
GAP1YKR039W BNR1P40450 1375 aa13.95□□□□□ -0.18
GAP1YKR039W SEC7P11075 2009 aaKnown RBP13.94□□□□□ -0.18
GAP1YKR039W ITT1Q04638 464 aa13.94□□□□□ -0.18
GAP1YKR039W TRM3Q07527 1436 aa13.91□□□□□ -0.18
GAP1YKR039W BNI1P41832 1953 aa13.88□□□□□ -0.19
GAP1YKR039W DOP1Q03921 1698 aa13.87□□□□□ -0.19
GAP1YKR039W GCN2P15442 1659 aa13.85□□□□□ -0.19
GAP1YKR039W CHC1P22137 1653 aaKnown RBP13.78□□□□□ -0.2
GAP1YKR039W NOP7P53261 605 aaKnown RBP13.71□□□□□ -0.21
GAP1YKR039W PAF1P38351 445 aa13.71□□□□□ -0.22
GAP1YKR039W YOR093CQ12275 1648 aa13.68□□□□□ -0.22
GAP1YKR039W PDR5P33302 1511 aaKnown RBP13.66□□□□□ -0.22
GAP1YKR039W BFR2Q06631 534 aaKnown RBP13.63□□□□□ -0.23
GAP1YKR039W URN1Q06525 465 aaKnown RBP13.62□□□□□ -0.23
GAP1YKR039W NUP188P52593 1655 aaKnown RBP13.61□□□□□ -0.23
GAP1YKR039W VMR1P38735 1592 aa13.6□□□□□ -0.23
GAP1YKR039W DNF2Q12675 1612 aa13.59□□□□□ -0.23
GAP1YKR039W PDR11P40550 1411 aa13.58□□□□□ -0.24
GAP1YKR039W RAV1P47104 1357 aa13.57□□□□□ -0.24
GAP1YKR039W IML1P47170 1584 aa13.56□□□□□ -0.24
GAP1YKR039W POL5P39985 1022 aaKnown RBP13.56□□□□□ -0.24
GAP1YKR039W IPL1P38991 367 aa13.55□□□□□ -0.24
GAP1YKR039W YAP3P38749 330 aa13.55□□□□□ -0.24
GAP1YKR039W RTC1Q08281 1341 aa13.53□□□□□ -0.24
GAP1YKR039W TYS1P36421 394 aaKnown RBP13.5□□□□□ -0.25
GAP1YKR039W ABP1P15891 592 aaKnown RBP13.42□□□□□ -0.26
GAP1YKR039W ESL2P36168 1195 aa13.39□□□□□ -0.27
GAP1YKR039W TAF5P38129 798 aa13.39□□□□□ -0.27
GAP1YKR039W ORC1P54784 914 aaPredicted RBP13.36□□□□□ -0.27
GAP1YKR039W HAP1P0CE41 1502 aa13.34□□□□□ -0.27
GAP1YKR039W TY3B-IQ7LHG5 1498 aaKnown RBP13.33□□□□□ -0.27
GAP1YKR039W NUP192P47054 1683 aa13.33□□□□□ -0.28
GAP1YKR039W DNF3Q12674 1656 aa13.33□□□□□ -0.28
GAP1YKR039W ALD4P46367 519 aaKnown RBP13.29□□□□□ -0.28
GAP1YKR039W KIP3P53086 805 aaKnown RBP13.29□□□□□ -0.28
GAP1YKR039W RAD9P14737 1309 aa13.26□□□□□ -0.29
GAP1YKR039W MAK10Q02197 733 aa13.25□□□□□ -0.29
GAP1YKR039W MHP1P43638 1398 aa13.25□□□□□ -0.29
GAP1YKR039W YLR419WQ06698 1435 aaKnown RBP13.23□□□□□ -0.29
GAP1YKR039W BCK1Q01389 1478 aa13.23□□□□□ -0.29
GAP1YKR039W CAB1Q04430 367 aa13.23□□□□□ -0.29
GAP1YKR039W SEC3P33332 1336 aaKnown RBP13.22□□□□□ -0.29
GAP1YKR039W SCT1P32784 759 aa13.22□□□□□ -0.29
GAP1YKR039W SPE2P21182 396 aa13.21□□□□□ -0.29
GAP1YKR039W TAF8Q03750 510 aa13.21□□□□□ -0.29
GAP1YKR039W NAP1P25293 417 aaKnown RBP13.19□□□□□ -0.3
GAP1YKR039W MRX12P47084 519 aa13.19□□□□□ -0.3
GAP1YKR039W KRE5P22023 1365 aa13.16□□□□□ -0.3
GAP1YKR039W SPT7P35177 1332 aa13.16□□□□□ -0.3
GAP1YKR039W RIA1P53893 1110 aa13.13□□□□□ -0.31
GAP1YKR039W PDS5Q04264 1277 aa13.13□□□□□ -0.31
GAP1YKR039W CFT1Q06632 1357 aaKnown RBP13.1□□□□□ -0.31
GAP1YKR039W CHZ1P40019 153 aaPredicted RBP13.09□□□□□ -0.31
GAP1YKR039W ENP1P38333 483 aaKnown RBP13.08□□□□□ -0.32
GAP1YKR039W PSD2P53037 1138 aaKnown RBP13.06□□□□□ -0.32
GAP1YKR039W NSR1P27476 414 aaKnown RBP RIP-Chip data13.06□□□□□ -0.32not detected
GAP1YKR039W LEU3P08638 886 aa13.02□□□□□ -0.33
GAP1YKR039W YNR029CP53729 429 aaKnown RBP13.02□□□□□ -0.33
GAP1YKR039W TY1B-NL2Q99337 1749 aaKnown RBP13.01□□□□□ -0.33
GAP1YKR039W MIF2P35201 549 aa13□□□□□ -0.33
GAP1YKR039W FKH1P40466 484 aa12.99□□□□□ -0.33
GAP1YKR039W RCM1P53972 490 aa12.99□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms