RNA–Protein interactions for RNA: YKL038W

RGT1, Transcript of Glucose-responsive transcription factor, yeastyeast

Gene RGT1, Length 3,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGT1YKL038W SMC4Q12267 1418 aa6.92□□□□□ -1.3
RGT1YKL038W RPS0BP46654 252 aaKnown RBP6.91□□□□□ -1.3
RGT1YKL038W PAN1P32521 1480 aa6.9□□□□□ -1.3
RGT1YKL038W TY1B-JR2P47100 1755 aaKnown RBP6.89□□□□□ -1.31
RGT1YKL038W TY1B-ER2Q03619 1755 aa6.89□□□□□ -1.31
RGT1YKL038W TY1B-MR1Q04214 1755 aa6.89□□□□□ -1.31
RGT1YKL038W TY1B-MR2Q04670 1755 aaKnown RBP6.89□□□□□ -1.31
RGT1YKL038W TY1B-LR1Q12088 1755 aaKnown RBP6.89□□□□□ -1.31
RGT1YKL038W TY1B-NL1Q12112 1755 aa6.89□□□□□ -1.31
RGT1YKL038W TY1B-GR1Q12141 1755 aa6.89□□□□□ -1.31
RGT1YKL038W TY1B-BLQ12490 1755 aa6.89□□□□□ -1.31
RGT1YKL038W DNF1P32660 1571 aa6.89□□□□□ -1.31
RGT1YKL038W SAS10Q12136 610 aaPredicted RBP6.89□□□□□ -1.31
RGT1YKL038W NTE1Q04958 1679 aa6.88□□□□□ -1.31
RGT1YKL038W SEC3P33332 1336 aaKnown RBP6.87□□□□□ -1.31
RGT1YKL038W FUN12P39730 1002 aaKnown RBP6.86□□□□□ -1.31
RGT1YKL038W RPO21P04050 1733 aaKnown RBP6.86□□□□□ -1.31
RGT1YKL038W MMS22Q06164 1454 aa6.85□□□□□ -1.31
RGT1YKL038W SPT21P35209 758 aa6.84□□□□□ -1.31
RGT1YKL038W MYO4P32492 1471 aa6.84□□□□□ -1.31
RGT1YKL038W EAF7P53911 425 aaKnown RBP6.84□□□□□ -1.32
RGT1YKL038W STU1P38198 1513 aa6.83□□□□□ -1.32
RGT1YKL038W FPR3P38911 411 aaKnown RBP6.83□□□□□ -1.32
RGT1YKL038W IME2P32581 645 aa6.83□□□□□ -1.32
RGT1YKL038W RIM101P33400 625 aa6.82□□□□□ -1.32
RGT1YKL038W PRS1P32895 427 aaKnown RBP6.82□□□□□ -1.32
RGT1YKL038W RNA1P11745 407 aaKnown RBP6.81□□□□□ -1.32
RGT1YKL038W ENV11P53246 860 aa6.8□□□□□ -1.32
RGT1YKL038W YRF1-1P0CX20 1796 aa6.8□□□□□ -1.32
RGT1YKL038W YRF1-5P0CX21 1796 aa6.8□□□□□ -1.32
RGT1YKL038W YRF1-8P0CX22 1796 aa6.8□□□□□ -1.32
RGT1YKL038W KRI1P42846 591 aaKnown RBP6.8□□□□□ -1.32
RGT1YKL038W LTE1P07866 1435 aa6.79□□□□□ -1.32
RGT1YKL038W VTH1P40438 1549 aa6.78□□□□□ -1.32
RGT1YKL038W VTH2P40890 1549 aa6.78□□□□□ -1.32
RGT1YKL038W RTT106P40161 455 aa6.78□□□□□ -1.32
RGT1YKL038W MLP2P40457 1679 aa6.77□□□□□ -1.33
RGT1YKL038W RPC31P17890 251 aa6.77□□□□□ -1.33
RGT1YKL038W SPP41P38904 1435 aa6.76□□□□□ -1.33
RGT1YKL038W DEF1P35732 738 aaKnown RBP6.75□□□□□ -1.33
RGT1YKL038W CFT1Q06632 1357 aaKnown RBP6.75□□□□□ -1.33
RGT1YKL038W ISW2Q08773 1120 aa6.75□□□□□ -1.33
RGT1YKL038W QCR6P00127 147 aa6.74□□□□□ -1.33
RGT1YKL038W PSH1Q12161 406 aa6.74□□□□□ -1.33
RGT1YKL038W BNI1P41832 1953 aa6.74□□□□□ -1.33
RGT1YKL038W SNQ2P32568 1501 aaKnown RBP6.73□□□□□ -1.33
RGT1YKL038W RPG1P38249 964 aaKnown RBP6.73□□□□□ -1.33
RGT1YKL038W TRM732Q03496 1420 aa6.73□□□□□ -1.33
RGT1YKL038W STH1P32597 1359 aa6.72□□□□□ -1.33
RGT1YKL038W YGR130CP53278 816 aa6.72□□□□□ -1.33
RGT1YKL038W FPR4Q06205 392 aaPredicted RBP6.72□□□□□ -1.33
RGT1YKL038W PRI1P10363 409 aa6.72□□□□□ -1.33
RGT1YKL038W TSC11P40061 1430 aa6.72□□□□□ -1.33
RGT1YKL038W PTP3P40048 928 aa6.71□□□□□ -1.33
RGT1YKL038W YTA7P40340 1379 aa6.7□□□□□ -1.34
RGT1YKL038W GEA2P39993 1459 aaKnown RBP6.7□□□□□ -1.34
RGT1YKL038W OPY1P38271 328 aa6.7□□□□□ -1.34
RGT1YKL038W NUP159P40477 1460 aa6.7□□□□□ -1.34
RGT1YKL038W SPO14P36126 1683 aa6.7□□□□□ -1.34
RGT1YKL038W SNT2P53127 1403 aa6.7□□□□□ -1.34
RGT1YKL038W RPL17AP05740 184 aaKnown RBP6.68□□□□□ -1.34
RGT1YKL038W SWE1P32944 819 aa6.68□□□□□ -1.34
RGT1YKL038W RPL17BP46990 184 aaKnown RBP6.68□□□□□ -1.34
RGT1YKL038W VPS15P22219 1454 aa6.67□□□□□ -1.34
RGT1YKL038W ULS1Q08562 1619 aa6.67□□□□□ -1.34
RGT1YKL038W PDR12Q02785 1511 aa6.67□□□□□ -1.34
RGT1YKL038W NAP1P25293 417 aaKnown RBP6.67□□□□□ -1.34
RGT1YKL038W NUG1P40010 520 aaKnown RBP6.67□□□□□ -1.34
RGT1YKL038W IRC20Q06554 1556 aa6.66□□□□□ -1.34
RGT1YKL038W PSD2P53037 1138 aaKnown RBP6.66□□□□□ -1.34
RGT1YKL038W DJP1P40564 432 aa6.65□□□□□ -1.34
RGT1YKL038W SPT2P06843 333 aaPredicted RBP6.64□□□□□ -1.35
RGT1YKL038W OXP1P28273 1286 aa6.64□□□□□ -1.35
RGT1YKL038W ORC1P54784 914 aaPredicted RBP6.64□□□□□ -1.35
RGT1YKL038W RAD26P40352 1085 aa6.64□□□□□ -1.35
RGT1YKL038W PAF1P38351 445 aa6.63□□□□□ -1.35
RGT1YKL038W SNF7P39929 240 aaKnown RBP6.63□□□□□ -1.35
RGT1YKL038W YPP1P46951 817 aa6.63□□□□□ -1.35
RGT1YKL038W DOP1Q03921 1698 aa6.62□□□□□ -1.35
RGT1YKL038W NOP53Q12080 455 aaKnown RBP6.61□□□□□ -1.35
RGT1YKL038W GDB1Q06625 1536 aa6.61□□□□□ -1.35
RGT1YKL038W IKI3Q06706 1349 aaKnown RBP6.61□□□□□ -1.35
RGT1YKL038W SSP1P38871 571 aa6.6□□□□□ -1.35
RGT1YKL038W DOS2P54858 310 aa6.6□□□□□ -1.35
RGT1YKL038W CTR9P89105 1077 aa6.6□□□□□ -1.35
RGT1YKL038W NUP170P38181 1502 aa6.6□□□□□ -1.35
RGT1YKL038W YRB30P53107 440 aaPredicted RBP6.59□□□□□ -1.35
RGT1YKL038W NOP58Q12499 511 aaKnown RBP6.58□□□□□ -1.36
RGT1YKL038W DNF2Q12675 1612 aa6.58□□□□□ -1.36
RGT1YKL038W ROX1P25042 368 aa6.58□□□□□ -1.36
RGT1YKL038W SSM4P40318 1319 aa6.57□□□□□ -1.36
RGT1YKL038W TRM3Q07527 1436 aa6.57□□□□□ -1.36
RGT1YKL038W RLF2Q12495 606 aa6.57□□□□□ -1.36
RGT1YKL038W BUD3P25558 1636 aa6.57□□□□□ -1.36
RGT1YKL038W CHC1P22137 1653 aaKnown RBP6.56□□□□□ -1.36
RGT1YKL038W CLB5P30283 435 aa6.56□□□□□ -1.36
RGT1YKL038W RLP24Q07915 199 aaKnown RBP6.55□□□□□ -1.36
RGT1YKL038W SLN1P39928 1220 aaPredicted RBP6.55□□□□□ -1.36
RGT1YKL038W PDR15Q04182 1529 aaKnown RBP6.54□□□□□ -1.36
RGT1YKL038W YBT1P32386 1661 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms