RNA–Protein interactions for RNA: YJR022W

LSM8, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM8, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM8YJR022W CHL1P22516 861 aaPredicted RBP6.95□□□□□ -1.3
LSM8YJR022W DCW1P36091 449 aa6.95□□□□□ -1.3
LSM8YJR022W YEL023CP39992 682 aa6.93□□□□□ -1.3
LSM8YJR022W PTC4P38089 393 aa6.92□□□□□ -1.3
LSM8YJR022W PRE3P38624 215 aa6.92□□□□□ -1.3
LSM8YJR022W YDR344CQ05510 147 aa6.82□□□□□ -1.32
LSM8YJR022W GRE2Q12068 342 aaKnown RBP6.82□□□□□ -1.32
LSM8YJR022W PML39Q03760 334 aa6.8□□□□□ -1.32
LSM8YJR022W VRP1P37370 817 aa6.78□□□□□ -1.32
LSM8YJR022W XDJ1P39102 459 aa6.77□□□□□ -1.33
LSM8YJR022W MIF2P35201 549 aa6.76□□□□□ -1.33
LSM8YJR022W ELP4Q02884 456 aaKnown RBP6.76□□□□□ -1.33
LSM8YJR022W MAK11P20484 414 aaKnown RBP6.75□□□□□ -1.33
LSM8YJR022W GUT1P32190 709 aa6.74□□□□□ -1.33
LSM8YJR022W PTC3P34221 468 aaKnown RBP6.74□□□□□ -1.33
LSM8YJR022W EDS1P38073 919 aa6.74□□□□□ -1.33
LSM8YJR022W ATH1P48016 1211 aa6.74□□□□□ -1.33
LSM8YJR022W RAM2P29703 316 aa6.72□□□□□ -1.33
LSM8YJR022W NST1P53935 1240 aa6.72□□□□□ -1.33
LSM8YJR022W ARH1P48360 493 aa6.71□□□□□ -1.34
LSM8YJR022W MID1P41821 548 aa6.7□□□□□ -1.34
LSM8YJR022W DPS1P04802 557 aaKnown RBP6.66□□□□□ -1.34
LSM8YJR022W SOL3P38858 249 aa6.66□□□□□ -1.34
LSM8YJR022W COQ8P27697 501 aa6.65□□□□□ -1.34
LSM8YJR022W AI4P03878 556 aa6.63□□□□□ -1.35
LSM8YJR022W MPH3P0CE00 602 aa6.63□□□□□ -1.35
LSM8YJR022W PEX29Q03370 554 aa6.63□□□□□ -1.35
LSM8YJR022W SPT23P35210 1082 aa6.62□□□□□ -1.35
LSM8YJR022W ILV3P39522 585 aaKnown RBP6.61□□□□□ -1.35
LSM8YJR022W HAP5Q02516 242 aa6.59□□□□□ -1.35
LSM8YJR022W BNI4P53858 892 aa6.56□□□□□ -1.36
LSM8YJR022W YGR273CP53329 174 aa6.54□□□□□ -1.36
LSM8YJR022W MPC54Q08550 464 aa6.54□□□□□ -1.36
LSM8YJR022W PTC2P39966 464 aaKnown RBP6.53□□□□□ -1.36
LSM8YJR022W SRC1Q03707 834 aa6.53□□□□□ -1.36
LSM8YJR022W YML082WQ04533 649 aaKnown RBP6.53□□□□□ -1.36
LSM8YJR022W NOP53Q12080 455 aaKnown RBP6.51□□□□□ -1.37
LSM8YJR022W NMA111P53920 997 aa6.48□□□□□ -1.37
LSM8YJR022W SLI15P38283 698 aa6.47□□□□□ -1.37
LSM8YJR022W DPL1Q05567 589 aa6.44□□□□□ -1.38
LSM8YJR022W YPR015CQ12531 247 aa6.41□□□□□ -1.38
LSM8YJR022W RAS1P01119 309 aa6.38□□□□□ -1.39
LSM8YJR022W RAM1P22007 431 aa6.38□□□□□ -1.39
LSM8YJR022W RGA2Q06407 1009 aa6.38□□□□□ -1.39
LSM8YJR022W KEX1P09620 729 aa6.37□□□□□ -1.39
LSM8YJR022W ISU2Q12056 156 aa6.36□□□□□ -1.39
LSM8YJR022W RGA1P39083 1007 aa6.34□□□□□ -1.39
LSM8YJR022W CDC73Q06697 393 aa6.33□□□□□ -1.4
LSM8YJR022W GYP1Q08484 637 aa6.31□□□□□ -1.4
LSM8YJR022W AMS1P22855 1083 aa6.3□□□□□ -1.4
LSM8YJR022W YLR326WQ06170 240 aaKnown RBP6.29□□□□□ -1.4
LSM8YJR022W PDR1P12383 1068 aa6.28□□□□□ -1.4
LSM8YJR022W SDH2P21801 266 aa6.27□□□□□ -1.41
LSM8YJR022W UBP14P38237 781 aaKnown RBP6.27□□□□□ -1.41
LSM8YJR022W TRK1P12685 1235 aa6.26□□□□□ -1.41
LSM8YJR022W VHR2P40041 505 aa6.26□□□□□ -1.41
LSM8YJR022W SET1P38827 1080 aaKnown RBP6.25□□□□□ -1.41
LSM8YJR022W SAS4Q04003 481 aa6.25□□□□□ -1.41
LSM8YJR022W PCS60P38137 543 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
LSM8YJR022W RAD54P32863 898 aa6.22□□□□□ -1.41
LSM8YJR022W RPP1BP10622 106 aaKnown RBP6.19□□□□□ -1.42
LSM8YJR022W YEL077CQ3E7X8 1277 aa6.19□□□□□ -1.42
LSM8YJR022W MRF1P30775 413 aaPredicted RBP6.14□□□□□ -1.43
LSM8YJR022W BUD20Q08004 166 aaPredicted RBP6.14□□□□□ -1.43
LSM8YJR022W YDR090CQ03193 310 aa6.13□□□□□ -1.43
LSM8YJR022W YRR1Q12172 810 aa6.13□□□□□ -1.43
LSM8YJR022W STR2P47164 639 aa6.12□□□□□ -1.43
LSM8YJR022W PRT1P06103 763 aaKnown RBP6.11□□□□□ -1.43
LSM8YJR022W GAP1P19145 602 aaPredicted RBP6.1□□□□□ -1.43
LSM8YJR022W KIC1P38692 1080 aa6.1□□□□□ -1.43
LSM8YJR022W PEX21P50091 288 aa6.1□□□□□ -1.43
LSM8YJR022W ISM1P48526 1002 aa6.09□□□□□ -1.43
LSM8YJR022W NUD1P32336 851 aa6.07□□□□□ -1.44
LSM8YJR022W YPL062WQ02781 134 aa6.07□□□□□ -1.44
LSM8YJR022W CSC1Q06538 782 aa6.07□□□□□ -1.44
LSM8YJR022W TFB4Q12004 338 aa6.07□□□□□ -1.44
LSM8YJR022W ERG12P07277 443 aa6.06□□□□□ -1.44
LSM8YJR022W IFH1P39520 1085 aa6.05□□□□□ -1.44
LSM8YJR022W AIR1P40507 360 aaKnown RBP6.05□□□□□ -1.44
LSM8YJR022W CST6P40535 587 aa6.05□□□□□ -1.44
LSM8YJR022W TUM1Q08686 304 aaKnown RBP6.05□□□□□ -1.44
LSM8YJR022W BRE2P43132 505 aa6.04□□□□□ -1.44
LSM8YJR022W CLA4P48562 842 aa6.03□□□□□ -1.44
LSM8YJR022W RQC2Q12532 1038 aaKnown RBP6.03□□□□□ -1.44
LSM8YJR022W TY1A-DR4O74302 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-HP0C2I4 478 aaKnown RBP6.01□□□□□ -1.45
LSM8YJR022W TY1A-AP0CX57 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-PR1P0CX58 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-ORP0CX59 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-PR2P0CX60 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-DR5P0CX65 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-ER2P0CX66 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-GR3P0CX67 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-LR1P0CX68 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-MR2P0CX69 440 aa6.01□□□□□ -1.45
LSM8YJR022W NPL4P33755 580 aa6.01□□□□□ -1.45
LSM8YJR022W ORC6P38826 435 aa6.01□□□□□ -1.45
LSM8YJR022W REF2P42073 533 aaPredicted RBP6.01□□□□□ -1.45
LSM8YJR022W TY1A-JR2P47099 440 aa6.01□□□□□ -1.45
LSM8YJR022W TY1A-DR1Q03856 440 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms