RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W PKC1P24583 1151 aa5.33□□□□□ -1.56
UBP12YJL197W BDF1P35817 686 aa5.32□□□□□ -1.56
UBP12YJL197W CDC3P32457 520 aaKnown RBP5.31□□□□□ -1.56
UBP12YJL197W RPL34BP40525 121 aaKnown RBP5.31□□□□□ -1.56
UBP12YJL197W CSN12P47130 423 aa5.31□□□□□ -1.56
UBP12YJL197W HEM3P28789 327 aa5.3□□□□□ -1.56
UBP12YJL197W ATG32P40458 529 aa5.3□□□□□ -1.56
UBP12YJL197W YJL007CP47080 104 aa5.3□□□□□ -1.56
UBP12YJL197W PAM1P37304 830 aaKnown RBP5.3□□□□□ -1.56
UBP12YJL197W EDS1P38073 919 aa5.3□□□□□ -1.56
UBP12YJL197W RPL34AP87262 121 aaPredicted RBP5.3□□□□□ -1.56
UBP12YJL197W PSE1P32337 1089 aaKnown RBP5.29□□□□□ -1.56
UBP12YJL197W MIF2P35201 549 aa5.29□□□□□ -1.56
UBP12YJL197W UBP14P38237 781 aaKnown RBP5.29□□□□□ -1.56
UBP12YJL197W SSF1P38789 453 aaPredicted RBP5.28□□□□□ -1.56
UBP12YJL197W MET10P39692 1035 aa5.28□□□□□ -1.56
UBP12YJL197W YMR1P47147 688 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
UBP12YJL197W TIF1P10081 395 aaKnown RBP5.27□□□□□ -1.57
UBP12YJL197W SEN54Q02825 467 aaPredicted RBP5.27□□□□□ -1.57
UBP12YJL197W TTI1P36097 1038 aa5.26□□□□□ -1.57
UBP12YJL197W YDR090CQ03193 310 aa5.26□□□□□ -1.57
UBP12YJL197W ASF1P32447 279 aa5.25□□□□□ -1.57
UBP12YJL197W RRN6P32786 894 aa5.25□□□□□ -1.57
UBP12YJL197W PTC3P34221 468 aaKnown RBP5.24□□□□□ -1.57
UBP12YJL197W SIS2P36024 562 aa5.24□□□□□ -1.57
UBP12YJL197W YTA7P40340 1379 aa5.24□□□□□ -1.57
UBP12YJL197W CPS1P27614 576 aa5.24□□□□□ -1.57
UBP12YJL197W TOP1P04786 769 aa5.23□□□□□ -1.57
UBP12YJL197W YBL036CP38197 257 aa5.23□□□□□ -1.57
UBP12YJL197W NOB1Q08444 459 aaKnown RBP5.23□□□□□ -1.57
UBP12YJL197W CSE4P36012 229 aa5.22□□□□□ -1.57
UBP12YJL197W DOS2P54858 310 aa5.22□□□□□ -1.57
UBP12YJL197W STS1P38637 319 aa5.22□□□□□ -1.57
UBP12YJL197W KIC1P38692 1080 aa5.22□□□□□ -1.57
UBP12YJL197W YPR204WQ08995 1032 aa5.21□□□□□ -1.58
UBP12YJL197W ERG12P07277 443 aa5.21□□□□□ -1.58
UBP12YJL197W VHR2P40041 505 aa5.2□□□□□ -1.58
UBP12YJL197W RTG2P32608 588 aaKnown RBP5.2□□□□□ -1.58
UBP12YJL197W KTR1P27810 393 aaKnown RBP5.19□□□□□ -1.58
UBP12YJL197W BIO2P32451 375 aa5.19□□□□□ -1.58
UBP12YJL197W TEA1P47988 759 aa5.19□□□□□ -1.58
UBP12YJL197W YLR326WQ06170 240 aaKnown RBP5.19□□□□□ -1.58
UBP12YJL197W STM1P39015 273 aaKnown RBP5.19□□□□□ -1.58
UBP12YJL197W CLB5P30283 435 aa5.18□□□□□ -1.58
UBP12YJL197W DBP1P24784 617 aaKnown RBP5.18□□□□□ -1.58
UBP12YJL197W SEC20P28791 383 aa5.18□□□□□ -1.58
UBP12YJL197W BRN1P38170 754 aa5.18□□□□□ -1.58
UBP12YJL197W OCA5P38738 679 aa5.18□□□□□ -1.58
UBP12YJL197W HAT1Q12341 374 aa5.17□□□□□ -1.58
UBP12YJL197W ITT1Q04638 464 aa5.17□□□□□ -1.58
UBP12YJL197W SPT5P27692 1063 aaKnown RBP5.16□□□□□ -1.58
UBP12YJL197W SCY1P53009 804 aa5.16□□□□□ -1.58
UBP12YJL197W FPR4Q06205 392 aaPredicted RBP5.16□□□□□ -1.58
UBP12YJL197W PUP1P25043 261 aa5.16□□□□□ -1.58
UBP12YJL197W PRY3P47033 881 aa5.16□□□□□ -1.58
UBP12YJL197W SVF1Q05515 481 aa5.16□□□□□ -1.58
UBP12YJL197W SUP45P12385 437 aaKnown RBP5.15□□□□□ -1.58
UBP12YJL197W RAD54P32863 898 aa5.15□□□□□ -1.58
UBP12YJL197W ORC6P38826 435 aa5.15□□□□□ -1.59
UBP12YJL197W HST2P53686 357 aa5.15□□□□□ -1.59
UBP12YJL197W YFR006WP43590 535 aa5.14□□□□□ -1.59
UBP12YJL197W GUT1P32190 709 aa5.13□□□□□ -1.59
UBP12YJL197W YNL108CP53929 270 aa5.13□□□□□ -1.59
UBP12YJL197W TYW1Q08960 810 aaKnown RBP5.13□□□□□ -1.59
UBP12YJL197W RAD59Q12223 238 aa5.13□□□□□ -1.59
UBP12YJL197W YML083CQ04526 418 aa5.13□□□□□ -1.59
UBP12YJL197W NNF1P47149 201 aa5.12□□□□□ -1.59
UBP12YJL197W YGR273CP53329 174 aa5.12□□□□□ -1.59
UBP12YJL197W MRX10Q05648 414 aa5.12□□□□□ -1.59
UBP12YJL197W ATH1P48016 1211 aa5.12□□□□□ -1.59
UBP12YJL197W UBP10P53874 792 aaPredicted RBP5.12□□□□□ -1.59
UBP12YJL197W SPC42P36094 363 aa5.12□□□□□ -1.59
UBP12YJL197W FAR11P53917 953 aa5.12□□□□□ -1.59
UBP12YJL197W YOR238WQ08634 303 aa5.12□□□□□ -1.59
UBP12YJL197W PCS60P38137 543 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
UBP12YJL197W KEX1P09620 729 aa5.11□□□□□ -1.59
UBP12YJL197W GRE2Q12068 342 aaKnown RBP5.11□□□□□ -1.59
UBP12YJL197W ENO1P00924 437 aaKnown RBP5.1□□□□□ -1.59
UBP12YJL197W TGL4P36165 910 aa5.1□□□□□ -1.59
UBP12YJL197W NMD2P38798 1089 aaKnown RBP5.1□□□□□ -1.59
UBP12YJL197W IPL1P38991 367 aa5.1□□□□□ -1.59
UBP12YJL197W MSC6Q08818 692 aaKnown RBP5.1□□□□□ -1.59
UBP12YJL197W MMP1Q12372 583 aa5.1□□□□□ -1.59
UBP12YJL197W RIM21P48565 533 aa5.1□□□□□ -1.59
UBP12YJL197W ENO2P00925 437 aaKnown RBP5.09□□□□□ -1.59
UBP12YJL197W RGR1P19263 1082 aa5.09□□□□□ -1.59
UBP12YJL197W YAF9P53930 226 aa5.09□□□□□ -1.59
UBP12YJL197W PKH3Q03306 898 aaPredicted RBP5.09□□□□□ -1.59
UBP12YJL197W RRP15Q06511 250 aaPredicted RBP5.09□□□□□ -1.59
UBP12YJL197W YPP1P46951 817 aa5.09□□□□□ -1.6
UBP12YJL197W FPK1P53739 893 aa5.09□□□□□ -1.6
UBP12YJL197W YMR196WQ04336 1088 aa5.09□□□□□ -1.6
UBP12YJL197W YBL113CQ7M4S9 792 aa5.08□□□□□ -1.6
UBP12YJL197W NSR1P27476 414 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
UBP12YJL197W ALD2P47771 506 aa5.08□□□□□ -1.6
UBP12YJL197W NIS1P53939 407 aa5.08□□□□□ -1.6
UBP12YJL197W MAK16P10962 306 aaPredicted RBP5.07□□□□□ -1.6
UBP12YJL197W VMA1P17255 1071 aaKnown RBP5.07□□□□□ -1.6
UBP12YJL197W PPX1P38698 397 aa5.07□□□□□ -1.6
UBP12YJL197W SLX5P32828 619 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms