RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W PTC4P38089 393 aa8.78□□□□□ -1
SNX4YJL036W YEL023CP39992 682 aa8.78□□□□□ -1
SNX4YJL036W CHL1P22516 861 aaPredicted RBP8.74□□□□□ -1.01
SNX4YJL036W BCK2P33306 851 aa8.72□□□□□ -1.01
SNX4YJL036W PRE3P38624 215 aa8.71□□□□□ -1.02
SNX4YJL036W GRE2Q12068 342 aaKnown RBP8.69□□□□□ -1.02
SNX4YJL036W MAK11P20484 414 aaKnown RBP8.65□□□□□ -1.02
SNX4YJL036W MIF2P35201 549 aa8.64□□□□□ -1.03
SNX4YJL036W RAM2P29703 316 aa8.62□□□□□ -1.03
SNX4YJL036W PTC3P34221 468 aaKnown RBP8.61□□□□□ -1.03
SNX4YJL036W EDS1P38073 919 aa8.61□□□□□ -1.03
SNX4YJL036W PML39Q03760 334 aa8.61□□□□□ -1.03
SNX4YJL036W GUT1P32190 709 aa8.6□□□□□ -1.03
SNX4YJL036W ATH1P48016 1211 aa8.6□□□□□ -1.03
SNX4YJL036W YDR344CQ05510 147 aa8.6□□□□□ -1.03
SNX4YJL036W NST1P53935 1240 aa8.55□□□□□ -1.04
SNX4YJL036W VRP1P37370 817 aa8.53□□□□□ -1.04
SNX4YJL036W ELP4Q02884 456 aaKnown RBP8.53□□□□□ -1.04
SNX4YJL036W COQ8P27697 501 aa8.52□□□□□ -1.05
SNX4YJL036W XDJ1P39102 459 aa8.51□□□□□ -1.05
SNX4YJL036W SOL3P38858 249 aa8.49□□□□□ -1.05
SNX4YJL036W MID1P41821 548 aa8.49□□□□□ -1.05
SNX4YJL036W ARH1P48360 493 aa8.49□□□□□ -1.05
SNX4YJL036W AI4P03878 556 aa8.44□□□□□ -1.06
SNX4YJL036W MPH3P0CE00 602 aa8.44□□□□□ -1.06
SNX4YJL036W ILV3P39522 585 aaKnown RBP8.4□□□□□ -1.06
SNX4YJL036W PEX29Q03370 554 aa8.4□□□□□ -1.06
SNX4YJL036W SPT23P35210 1082 aa8.38□□□□□ -1.07
SNX4YJL036W NOP53Q12080 455 aaKnown RBP8.37□□□□□ -1.07
SNX4YJL036W DPS1P04802 557 aaKnown RBP8.35□□□□□ -1.07
SNX4YJL036W HAP5Q02516 242 aa8.35□□□□□ -1.07
SNX4YJL036W YGR273CP53329 174 aa8.34□□□□□ -1.07
SNX4YJL036W BNI4P53858 892 aa8.31□□□□□ -1.08
SNX4YJL036W MPC54Q08550 464 aa8.31□□□□□ -1.08
SNX4YJL036W YML082WQ04533 649 aaKnown RBP8.27□□□□□ -1.09
SNX4YJL036W PTC2P39966 464 aaKnown RBP8.26□□□□□ -1.09
SNX4YJL036W SLI15P38283 698 aa8.25□□□□□ -1.09
SNX4YJL036W NMA111P53920 997 aa8.23□□□□□ -1.09
SNX4YJL036W DPL1Q05567 589 aa8.2□□□□□ -1.1
SNX4YJL036W SRC1Q03707 834 aa8.17□□□□□ -1.1
SNX4YJL036W KEX1P09620 729 aa8.15□□□□□ -1.1
SNX4YJL036W YPR015CQ12531 247 aa8.12□□□□□ -1.11
SNX4YJL036W ISU2Q12056 156 aa8.11□□□□□ -1.11
SNX4YJL036W RAM1P22007 431 aa8.1□□□□□ -1.11
SNX4YJL036W SET1P38827 1080 aaKnown RBP8.08□□□□□ -1.12
SNX4YJL036W CDC73Q06697 393 aa8.08□□□□□ -1.12
SNX4YJL036W YLR326WQ06170 240 aaKnown RBP8.07□□□□□ -1.12
SNX4YJL036W UBP14P38237 781 aaKnown RBP8.06□□□□□ -1.12
SNX4YJL036W RAS1P01119 309 aa8.04□□□□□ -1.12
SNX4YJL036W VHR2P40041 505 aa8.03□□□□□ -1.12
SNX4YJL036W PCS60P38137 543 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
SNX4YJL036W PDR1P12383 1068 aa7.99□□□□□ -1.13
SNX4YJL036W GYP1Q08484 637 aa7.99□□□□□ -1.13
SNX4YJL036W RAD54P32863 898 aa7.98□□□□□ -1.13
SNX4YJL036W AMS1P22855 1083 aa7.95□□□□□ -1.14
SNX4YJL036W RPP1BP10622 106 aaKnown RBP7.93□□□□□ -1.14
SNX4YJL036W SAS4Q04003 481 aa7.93□□□□□ -1.14
SNX4YJL036W SDH2P21801 266 aa7.92□□□□□ -1.14
SNX4YJL036W YDR090CQ03193 310 aa7.9□□□□□ -1.14
SNX4YJL036W TRK1P12685 1235 aa7.88□□□□□ -1.15
SNX4YJL036W RGA2Q06407 1009 aa7.88□□□□□ -1.15
SNX4YJL036W RGA1P39083 1007 aa7.87□□□□□ -1.15
SNX4YJL036W IFH1P39520 1085 aa7.85□□□□□ -1.15
SNX4YJL036W KIC1P38692 1080 aa7.84□□□□□ -1.15
SNX4YJL036W BUD20Q08004 166 aaPredicted RBP7.84□□□□□ -1.15
SNX4YJL036W YEL077CQ3E7X8 1277 aa7.84□□□□□ -1.15
SNX4YJL036W YRR1Q12172 810 aa7.83□□□□□ -1.16
SNX4YJL036W GAP1P19145 602 aaPredicted RBP7.82□□□□□ -1.16
SNX4YJL036W MRF1P30775 413 aaPredicted RBP7.81□□□□□ -1.16
SNX4YJL036W PEX21P50091 288 aa7.81□□□□□ -1.16
SNX4YJL036W PRT1P06103 763 aaKnown RBP7.8□□□□□ -1.16
SNX4YJL036W STR2P47164 639 aa7.79□□□□□ -1.16
SNX4YJL036W CSC1Q06538 782 aa7.79□□□□□ -1.16
SNX4YJL036W TFB4Q12004 338 aa7.79□□□□□ -1.16
SNX4YJL036W REF2P42073 533 aaPredicted RBP7.78□□□□□ -1.16
SNX4YJL036W ISM1P48526 1002 aa7.78□□□□□ -1.16
SNX4YJL036W YPR148CQ06523 435 aa7.78□□□□□ -1.16
SNX4YJL036W TUM1Q08686 304 aaKnown RBP7.76□□□□□ -1.17
SNX4YJL036W NUD1P32336 851 aa7.75□□□□□ -1.17
SNX4YJL036W ORC6P38826 435 aa7.73□□□□□ -1.17
SNX4YJL036W ERG12P07277 443 aa7.7□□□□□ -1.18
SNX4YJL036W NPL4P33755 580 aa7.68□□□□□ -1.18
SNX4YJL036W TY1A-DR4O74302 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-HP0C2I4 478 aaKnown RBP7.67□□□□□ -1.18
SNX4YJL036W TY1A-AP0CX57 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-PR1P0CX58 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-ORP0CX59 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-PR2P0CX60 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-DR5P0CX65 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-ER2P0CX66 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-GR3P0CX67 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-LR1P0CX68 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-MR2P0CX69 440 aa7.67□□□□□ -1.18
SNX4YJL036W CST6P40535 587 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-JR2P47099 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-DR1Q03856 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-ML1Q04706 440 aaKnown RBP7.67□□□□□ -1.18
SNX4YJL036W TY1A-BRQ12217 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-NL2Q12470 440 aa7.67□□□□□ -1.18
SNX4YJL036W TY1A-GR2Q12485 440 aa7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms