RNA–Protein interactions for RNA: YJL020C

BBC1, Transcript of Protein possibly involved in assembly of actin patches, yeastyeast

Gene BBC1, Length 3,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BBC1YJL020C TY1B-GR2Q12269 1755 aa6.04□□□□□ -1.44
BBC1YJL020C TY1B-OLQ12273 1755 aa6.04□□□□□ -1.44
BBC1YJL020C TY1B-PLQ12414 1755 aaKnown RBP6.04□□□□□ -1.44
BBC1YJL020C YFR016CP43597 1233 aaKnown RBP6.03□□□□□ -1.44
BBC1YJL020C CDC25P04821 1589 aa6.02□□□□□ -1.45
BBC1YJL020C KRI1P42846 591 aaKnown RBP6.02□□□□□ -1.45
BBC1YJL020C SWE1P32944 819 aa6.01□□□□□ -1.45
BBC1YJL020C SSP1P38871 571 aa5.99□□□□□ -1.45
BBC1YJL020C SNQ2P32568 1501 aaKnown RBP5.99□□□□□ -1.45
BBC1YJL020C MLP2P40457 1679 aa5.98□□□□□ -1.45
BBC1YJL020C SPP41P38904 1435 aa5.97□□□□□ -1.45
BBC1YJL020C PAN1P32521 1480 aa5.97□□□□□ -1.45
BBC1YJL020C RSE1Q04693 1361 aaKnown RBP5.97□□□□□ -1.45
BBC1YJL020C VTH1P40438 1549 aa5.95□□□□□ -1.46
BBC1YJL020C VTH2P40890 1549 aa5.95□□□□□ -1.46
BBC1YJL020C NUP170P38181 1502 aa5.95□□□□□ -1.46
BBC1YJL020C SIS2P36024 562 aa5.94□□□□□ -1.46
BBC1YJL020C STH1P32597 1359 aa5.94□□□□□ -1.46
BBC1YJL020C LAM6Q08001 693 aa5.93□□□□□ -1.46
BBC1YJL020C TSC11P40061 1430 aa5.93□□□□□ -1.46
BBC1YJL020C ULS1Q08562 1619 aa5.93□□□□□ -1.46
BBC1YJL020C TY1B-JR2P47100 1755 aaKnown RBP5.93□□□□□ -1.46
BBC1YJL020C TY1B-ER2Q03619 1755 aa5.93□□□□□ -1.46
BBC1YJL020C TY1B-MR1Q04214 1755 aa5.93□□□□□ -1.46
BBC1YJL020C TY1B-MR2Q04670 1755 aaKnown RBP5.93□□□□□ -1.46
BBC1YJL020C TY1B-LR1Q12088 1755 aaKnown RBP5.93□□□□□ -1.46
BBC1YJL020C TY1B-NL1Q12112 1755 aa5.93□□□□□ -1.46
BBC1YJL020C TY1B-GR1Q12141 1755 aa5.93□□□□□ -1.46
BBC1YJL020C TY1B-BLQ12490 1755 aa5.93□□□□□ -1.46
BBC1YJL020C SNT2P53127 1403 aa5.93□□□□□ -1.46
BBC1YJL020C ESC1Q03661 1658 aaKnown RBP5.92□□□□□ -1.46
BBC1YJL020C BRL1P38770 471 aa5.92□□□□□ -1.46
BBC1YJL020C RPA190P10964 1664 aaKnown RBP5.92□□□□□ -1.46
BBC1YJL020C NTE1Q04958 1679 aa5.92□□□□□ -1.46
BBC1YJL020C RPO21P04050 1733 aaKnown RBP5.91□□□□□ -1.46
BBC1YJL020C SLX8P40072 274 aa5.91□□□□□ -1.46
BBC1YJL020C MDG1P53885 366 aa5.91□□□□□ -1.46
BBC1YJL020C FAR11P53917 953 aa5.9□□□□□ -1.46
BBC1YJL020C NUG1P40010 520 aaKnown RBP5.9□□□□□ -1.46
BBC1YJL020C PDR15Q04182 1529 aaKnown RBP5.9□□□□□ -1.47
BBC1YJL020C MRX12P47084 519 aa5.89□□□□□ -1.47
BBC1YJL020C TPO2P53283 614 aa5.89□□□□□ -1.47
BBC1YJL020C IRC20Q06554 1556 aa5.89□□□□□ -1.47
BBC1YJL020C GIN4Q12263 1142 aa5.88□□□□□ -1.47
BBC1YJL020C GEA2P39993 1459 aaKnown RBP5.87□□□□□ -1.47
BBC1YJL020C RIM101P33400 625 aa5.87□□□□□ -1.47
BBC1YJL020C PAM1P37304 830 aaKnown RBP5.87□□□□□ -1.47
BBC1YJL020C DOS2P54858 310 aa5.87□□□□□ -1.47
BBC1YJL020C TRM732Q03496 1420 aa5.87□□□□□ -1.47
BBC1YJL020C CAT8P39113 1433 aa5.86□□□□□ -1.47
BBC1YJL020C MET5P47169 1442 aa5.85□□□□□ -1.47
BBC1YJL020C MAM3Q12296 706 aa5.85□□□□□ -1.47
BBC1YJL020C PDR10P51533 1564 aa5.85□□□□□ -1.47
BBC1YJL020C PDR12Q02785 1511 aa5.84□□□□□ -1.47
BBC1YJL020C SPC42P36094 363 aa5.84□□□□□ -1.47
BBC1YJL020C IKI3Q06706 1349 aaKnown RBP5.84□□□□□ -1.47
BBC1YJL020C CWC22P53333 577 aaKnown RBP5.84□□□□□ -1.47
BBC1YJL020C GEA1P47102 1408 aaPredicted RBP5.84□□□□□ -1.48
BBC1YJL020C DNF1P32660 1571 aa5.83□□□□□ -1.48
BBC1YJL020C GEF1P37020 779 aa5.82□□□□□ -1.48
BBC1YJL020C RPS0BP46654 252 aaKnown RBP5.82□□□□□ -1.48
BBC1YJL020C YBT1P32386 1661 aa5.82□□□□□ -1.48
BBC1YJL020C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
BBC1YJL020C NOP7P53261 605 aaKnown RBP5.81□□□□□ -1.48
BBC1YJL020C TY3B-GQ99315 1547 aa5.8□□□□□ -1.48
BBC1YJL020C MNN4P36044 1178 aa5.8□□□□□ -1.48
BBC1YJL020C NUP159P40477 1460 aa5.79□□□□□ -1.48
BBC1YJL020C SSA1P10591 642 aaKnown RBP5.79□□□□□ -1.48
BBC1YJL020C KIN1P13185 1064 aa5.79□□□□□ -1.48
BBC1YJL020C ASF1P32447 279 aa5.79□□□□□ -1.48
BBC1YJL020C SUB2Q07478 446 aaKnown RBP5.79□□□□□ -1.48
BBC1YJL020C BRN1P38170 754 aa5.79□□□□□ -1.48
BBC1YJL020C OSW7P43611 510 aa5.79□□□□□ -1.48
BBC1YJL020C OCA5P38738 679 aa5.78□□□□□ -1.48
BBC1YJL020C GDB1Q06625 1536 aa5.78□□□□□ -1.48
BBC1YJL020C SSF1P38789 453 aaPredicted RBP5.78□□□□□ -1.48
BBC1YJL020C YPR148CQ06523 435 aa5.78□□□□□ -1.48
BBC1YJL020C RLP24Q07915 199 aaKnown RBP5.76□□□□□ -1.49
BBC1YJL020C BUD3P25558 1636 aa5.76□□□□□ -1.49
BBC1YJL020C SUB1P54000 292 aaKnown RBP5.76□□□□□ -1.49
BBC1YJL020C VPS72Q03388 795 aa5.76□□□□□ -1.49
BBC1YJL020C SPT21P35209 758 aa5.76□□□□□ -1.49
BBC1YJL020C RTS3P53289 263 aa5.76□□□□□ -1.49
BBC1YJL020C IQG1Q12280 1495 aa5.76□□□□□ -1.49
BBC1YJL020C VPS15P22219 1454 aa5.75□□□□□ -1.49
BBC1YJL020C OXP1P28273 1286 aa5.75□□□□□ -1.49
BBC1YJL020C YLR271WQ06152 274 aa5.75□□□□□ -1.49
BBC1YJL020C YRF1-1P0CX20 1796 aa5.75□□□□□ -1.49
BBC1YJL020C YRF1-5P0CX21 1796 aa5.75□□□□□ -1.49
BBC1YJL020C YRF1-8P0CX22 1796 aa5.75□□□□□ -1.49
BBC1YJL020C SPB4P25808 606 aaPredicted RBP5.74□□□□□ -1.49
BBC1YJL020C EBP2P36049 427 aaKnown RBP5.74□□□□□ -1.49
BBC1YJL020C YJR008WP47085 338 aa5.74□□□□□ -1.49
BBC1YJL020C SPO14P36126 1683 aa5.73□□□□□ -1.49
BBC1YJL020C BUD21Q08492 214 aaPredicted RBP5.73□□□□□ -1.49
BBC1YJL020C DSF2P38213 736 aa5.72□□□□□ -1.49
BBC1YJL020C ARO1P08566 1588 aaKnown RBP5.72□□□□□ -1.49
BBC1YJL020C TOA1P32773 286 aa5.72□□□□□ -1.49
BBC1YJL020C ISW1P38144 1129 aa5.72□□□□□ -1.49
BBC1YJL020C SEN54Q02825 467 aaPredicted RBP5.71□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms