RNA–Protein interactions for RNA: YIR035C

YIR035C, Transcript of Putative cytoplasmic short-chain dehydrogenase/reductase, yeast

Gene YIR035C, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR035C	YIR035C	TY1B-GR1	Q12141	1755 aa		11.8	□□□□□ -0.52
YIR035C	YIR035C	TY1B-BL	Q12490	1755 aa		11.8	□□□□□ -0.52
YIR035C	YIR035C	DNF1	P32660	1571 aa		11.79	□□□□□ -0.52
YIR035C	YIR035C	NTE1	Q04958	1679 aa		11.78	□□□□□ -0.52
YIR035C	YIR035C	ULS1	Q08562	1619 aa		11.75	□□□□□ -0.53
YIR035C	YIR035C	GEA1	P47102	1408 aa	Predicted RBP	11.73	□□□□□ -0.53
YIR035C	YIR035C	SNT2	P53127	1403 aa		11.73	□□□□□ -0.53
YIR035C	YIR035C	RPO21	P04050	1733 aa	Known RBP	11.72	□□□□□ -0.53
YIR035C	YIR035C	NUP159	P40477	1460 aa		11.71	□□□□□ -0.53
YIR035C	YIR035C	GEA2	P39993	1459 aa	Known RBP	11.7	□□□□□ -0.54
YIR035C	YIR035C	MET5	P47169	1442 aa		11.7	□□□□□ -0.54
YIR035C	YIR035C	IKI3	Q06706	1349 aa	Known RBP	11.67	□□□□□ -0.54
YIR035C	YIR035C	MET10	P39692	1035 aa		11.63	□□□□□ -0.55
YIR035C	YIR035C	VPS15	P22219	1454 aa		11.6	□□□□□ -0.55
YIR035C	YIR035C	CAT8	P39113	1433 aa		11.6	□□□□□ -0.55
YIR035C	YIR035C	IRC20	Q06554	1556 aa		11.56	□□□□□ -0.56
YIR035C	YIR035C	YRF1-1	P0CX20	1796 aa		11.54	□□□□□ -0.56
YIR035C	YIR035C	YRF1-5	P0CX21	1796 aa		11.54	□□□□□ -0.56
YIR035C	YIR035C	YRF1-8	P0CX22	1796 aa		11.54	□□□□□ -0.56
YIR035C	YIR035C	YBT1	P32386	1661 aa		11.52	□□□□□ -0.57
YIR035C	YIR035C	PDR12	Q02785	1511 aa		11.51	□□□□□ -0.57
YIR035C	YIR035C	TY3B-G	Q99315	1547 aa		11.51	□□□□□ -0.57
YIR035C	YIR035C	SPO14	P36126	1683 aa		11.49	□□□□□ -0.57
YIR035C	YIR035C	CKB1	P43639	278 aa		11.49	□□□□□ -0.57
YIR035C	YIR035C	NUP157	P40064	1391 aa	Known RBP	11.49	□□□□□ -0.57
YIR035C	YIR035C	LTE1	P07866	1435 aa		11.48	□□□□□ -0.57
YIR035C	YIR035C	NUP170	P38181	1502 aa		11.48	□□□□□ -0.57
YIR035C	YIR035C	GDB1	Q06625	1536 aa		11.47	□□□□□ -0.57
YIR035C	YIR035C	PDR10	P51533	1564 aa		11.46	□□□□□ -0.57
YIR035C	YIR035C	SSM4	P40318	1319 aa		11.44	□□□□□ -0.58
YIR035C	YIR035C	SRB8	P25648	1427 aa		11.43	□□□□□ -0.58
YIR035C	YIR035C	BUD3	P25558	1636 aa		11.41	□□□□□ -0.58
YIR035C	YIR035C	ARO1	P08566	1588 aa	Known RBP	11.4	□□□□□ -0.58
YIR035C	YIR035C	IQG1	Q12280	1495 aa		11.38	□□□□□ -0.59
YIR035C	YIR035C	BUD21	Q08492	214 aa	Predicted RBP	11.36	□□□□□ -0.59
YIR035C	YIR035C	DRS2	P39524	1355 aa		11.36	□□□□□ -0.59
YIR035C	YIR035C	MMS1	Q06211	1407 aa		11.34	□□□□□ -0.59
YIR035C	YIR035C	BNR1	P40450	1375 aa		11.28	□□□□□ -0.6
YIR035C	YIR035C	TRM3	Q07527	1436 aa		11.27	□□□□□ -0.6
YIR035C	YIR035C	YSP2	Q06681	1438 aa		11.26	□□□□□ -0.61
YIR035C	YIR035C	DOP1	Q03921	1698 aa		11.25	□□□□□ -0.61
YIR035C	YIR035C	SEC7	P11075	2009 aa	Known RBP	11.24	□□□□□ -0.61
YIR035C	YIR035C	GCN2	P15442	1659 aa		11.21	□□□□□ -0.61
YIR035C	YIR035C	ITT1	Q04638	464 aa		11.21	□□□□□ -0.61
YIR035C	YIR035C	PAF1	P38351	445 aa		11.18	□□□□□ -0.62
YIR035C	YIR035C	NOP7	P53261	605 aa	Known RBP	11.17	□□□□□ -0.62
YIR035C	YIR035C	CHC1	P22137	1653 aa	Known RBP	11.17	□□□□□ -0.62
YIR035C	YIR035C	BNI1	P41832	1953 aa		11.13	□□□□□ -0.63
YIR035C	YIR035C	URN1	Q06525	465 aa	Known RBP	11.11	□□□□□ -0.63
YIR035C	YIR035C	YOR093C	Q12275	1648 aa		11.05	□□□□□ -0.64
YIR035C	YIR035C	BFR2	Q06631	534 aa	Known RBP	11.04	□□□□□ -0.64
YIR035C	YIR035C	DNF2	Q12675	1612 aa		11.02	□□□□□ -0.65
YIR035C	YIR035C	POL5	P39985	1022 aa	Known RBP	11.01	□□□□□ -0.65
YIR035C	YIR035C	PDR5	P33302	1511 aa	Known RBP	11	□□□□□ -0.65
YIR035C	YIR035C	NUP188	P52593	1655 aa	Known RBP	11	□□□□□ -0.65
YIR035C	YIR035C	IML1	P47170	1584 aa		10.96	□□□□□ -0.65
YIR035C	YIR035C	YAP3	P38749	330 aa		10.95	□□□□□ -0.66
YIR035C	YIR035C	ABP1	P15891	592 aa	Known RBP	10.93	□□□□□ -0.66
YIR035C	YIR035C	IPL1	P38991	367 aa		10.93	□□□□□ -0.66
YIR035C	YIR035C	VMR1	P38735	1592 aa		10.93	□□□□□ -0.66
YIR035C	YIR035C	RAV1	P47104	1357 aa		10.92	□□□□□ -0.66
YIR035C	YIR035C	RTC1	Q08281	1341 aa		10.9	□□□□□ -0.66
YIR035C	YIR035C	SCT1	P32784	759 aa		10.89	□□□□□ -0.67
YIR035C	YIR035C	ESL2	P36168	1195 aa		10.86	□□□□□ -0.67
YIR035C	YIR035C	TYS1	P36421	394 aa	Known RBP	10.85	□□□□□ -0.67
YIR035C	YIR035C	PDR11	P40550	1411 aa		10.84	□□□□□ -0.67
YIR035C	YIR035C	TAF5	P38129	798 aa		10.84	□□□□□ -0.67
YIR035C	YIR035C	NAP1	P25293	417 aa	Known RBP	10.81	□□□□□ -0.68
YIR035C	YIR035C	ORC1	P54784	914 aa	Predicted RBP	10.81	□□□□□ -0.68
YIR035C	YIR035C	DNF3	Q12674	1656 aa		10.79	□□□□□ -0.68
YIR035C	YIR035C	HAP1	P0CE41	1502 aa		10.77	□□□□□ -0.69
YIR035C	YIR035C	MRX12	P47084	519 aa		10.75	□□□□□ -0.69
YIR035C	YIR035C	SEC3	P33332	1336 aa	Known RBP	10.75	□□□□□ -0.69
YIR035C	YIR035C	KIP3	P53086	805 aa	Known RBP	10.74	□□□□□ -0.69
YIR035C	YIR035C	ALD4	P46367	519 aa	Known RBP	10.73	□□□□□ -0.69
YIR035C	YIR035C	MAK10	Q02197	733 aa		10.72	□□□□□ -0.69
YIR035C	YIR035C	MHP1	P43638	1398 aa		10.72	□□□□□ -0.69
YIR035C	YIR035C	TY3B-I	Q7LHG5	1498 aa	Known RBP	10.72	□□□□□ -0.69
YIR035C	YIR035C	NUP192	P47054	1683 aa		10.69	□□□□□ -0.7
YIR035C	YIR035C	TAF8	Q03750	510 aa		10.68	□□□□□ -0.7
YIR035C	YIR035C	BCK1	Q01389	1478 aa		10.68	□□□□□ -0.7
YIR035C	YIR035C	RAD9	P14737	1309 aa		10.67	□□□□□ -0.7
YIR035C	YIR035C	SPE2	P21182	396 aa		10.67	□□□□□ -0.7
YIR035C	YIR035C	CAB1	Q04430	367 aa		10.67	□□□□□ -0.7
YIR035C	YIR035C	YLR419W	Q06698	1435 aa	Known RBP	10.66	□□□□□ -0.7
YIR035C	YIR035C	RIA1	P53893	1110 aa		10.64	□□□□□ -0.71
YIR035C	YIR035C	KRE5	P22023	1365 aa		10.62	□□□□□ -0.71
YIR035C	YIR035C	PDS5	Q04264	1277 aa		10.61	□□□□□ -0.71
YIR035C	YIR035C	SPT7	P35177	1332 aa		10.59	□□□□□ -0.71
YIR035C	YIR035C	MIF2	P35201	549 aa		10.59	□□□□□ -0.71
YIR035C	YIR035C	ENP1	P38333	483 aa	Known RBP	10.59	□□□□□ -0.71
YIR035C	YIR035C	CHZ1	P40019	153 aa	Predicted RBP	10.59	□□□□□ -0.71
YIR035C	YIR035C	TY1B-NL2	Q99337	1749 aa	Known RBP	10.58	□□□□□ -0.72
YIR035C	YIR035C	CFT1	Q06632	1357 aa	Known RBP	10.56	□□□□□ -0.72
YIR035C	YIR035C	YMR196W	Q04336	1088 aa		10.55	□□□□□ -0.72
YIR035C	YIR035C	LEU3	P08638	886 aa		10.54	□□□□□ -0.72
YIR035C	YIR035C	MLP1	Q02455	1875 aa	Known RBP	10.54	□□□□□ -0.72
YIR035C	YIR035C	USO1	P25386	1790 aa		10.54	□□□□□ -0.72
YIR035C	YIR035C	PSD2	P53037	1138 aa	Known RBP	10.52	□□□□□ -0.73
YIR035C	YIR035C	YNR029C	P53729	429 aa	Known RBP	10.5	□□□□□ -0.73

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