RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeastyeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCI8YIL071C CHL1P22516 861 aaPredicted RBP10.36□□□□□ -0.75
PCI8YIL071C BCK2P33306 851 aa10.36□□□□□ -0.75
PCI8YIL071C PTC4P38089 393 aa10.35□□□□□ -0.75
PCI8YIL071C YEL023CP39992 682 aa10.35□□□□□ -0.75
PCI8YIL071C PRE3P38624 215 aa10.32□□□□□ -0.76
PCI8YIL071C GRE2Q12068 342 aaKnown RBP10.24□□□□□ -0.77
PCI8YIL071C MIF2P35201 549 aa10.16□□□□□ -0.78
PCI8YIL071C PML39Q03760 334 aa10.16□□□□□ -0.78
PCI8YIL071C ATH1P48016 1211 aa10.14□□□□□ -0.79
PCI8YIL071C MAK11P20484 414 aaKnown RBP10.12□□□□□ -0.79
PCI8YIL071C ELP4Q02884 456 aaKnown RBP10.12□□□□□ -0.79
PCI8YIL071C VRP1P37370 817 aa10.11□□□□□ -0.79
PCI8YIL071C GUT1P32190 709 aa10.1□□□□□ -0.79
PCI8YIL071C XDJ1P39102 459 aa10.09□□□□□ -0.79
PCI8YIL071C PTC3P34221 468 aaKnown RBP10.07□□□□□ -0.8
PCI8YIL071C EDS1P38073 919 aa10.04□□□□□ -0.8
PCI8YIL071C YDR344CQ05510 147 aa10.04□□□□□ -0.8
PCI8YIL071C RAM2P29703 316 aa10.03□□□□□ -0.8
PCI8YIL071C ARH1P48360 493 aa10.01□□□□□ -0.81
PCI8YIL071C PEX29Q03370 554 aa9.99□□□□□ -0.81
PCI8YIL071C MID1P41821 548 aa9.97□□□□□ -0.81
PCI8YIL071C COQ8P27697 501 aa9.96□□□□□ -0.82
PCI8YIL071C DPS1P04802 557 aaKnown RBP9.93□□□□□ -0.82
PCI8YIL071C NST1P53935 1240 aa9.93□□□□□ -0.82
PCI8YIL071C AI4P03878 556 aa9.92□□□□□ -0.82
PCI8YIL071C SPT23P35210 1082 aa9.92□□□□□ -0.82
PCI8YIL071C MPH3P0CE00 602 aa9.9□□□□□ -0.82
PCI8YIL071C SOL3P38858 249 aa9.88□□□□□ -0.83
PCI8YIL071C HAP5Q02516 242 aa9.85□□□□□ -0.83
PCI8YIL071C NOP53Q12080 455 aaKnown RBP9.81□□□□□ -0.84
PCI8YIL071C BNI4P53858 892 aa9.8□□□□□ -0.84
PCI8YIL071C PTC2P39966 464 aaKnown RBP9.79□□□□□ -0.84
PCI8YIL071C ILV3P39522 585 aaKnown RBP9.78□□□□□ -0.84
PCI8YIL071C YGR273CP53329 174 aa9.78□□□□□ -0.84
PCI8YIL071C YML082WQ04533 649 aaKnown RBP9.75□□□□□ -0.85
PCI8YIL071C MPC54Q08550 464 aa9.75□□□□□ -0.85
PCI8YIL071C NMA111P53920 997 aa9.69□□□□□ -0.86
PCI8YIL071C SLI15P38283 698 aa9.65□□□□□ -0.86
PCI8YIL071C DPL1Q05567 589 aa9.65□□□□□ -0.86
PCI8YIL071C SRC1Q03707 834 aa9.6□□□□□ -0.87
PCI8YIL071C KEX1P09620 729 aa9.55□□□□□ -0.88
PCI8YIL071C ISU2Q12056 156 aa9.55□□□□□ -0.88
PCI8YIL071C GYP1Q08484 637 aa9.49□□□□□ -0.89
PCI8YIL071C YPR015CQ12531 247 aa9.49□□□□□ -0.89
PCI8YIL071C RAS1P01119 309 aa9.47□□□□□ -0.89
PCI8YIL071C RAM1P22007 431 aa9.46□□□□□ -0.9
PCI8YIL071C CDC73Q06697 393 aa9.45□□□□□ -0.9
PCI8YIL071C SET1P38827 1080 aaKnown RBP9.42□□□□□ -0.9
PCI8YIL071C RPP1BP10622 106 aaKnown RBP9.41□□□□□ -0.9
PCI8YIL071C AMS1P22855 1083 aa9.4□□□□□ -0.9
PCI8YIL071C YLR326WQ06170 240 aaKnown RBP9.4□□□□□ -0.9
PCI8YIL071C VHR2P40041 505 aa9.39□□□□□ -0.91
PCI8YIL071C SAS4Q04003 481 aa9.39□□□□□ -0.91
PCI8YIL071C UBP14P38237 781 aaKnown RBP9.37□□□□□ -0.91
PCI8YIL071C RAD54P32863 898 aa9.36□□□□□ -0.91
PCI8YIL071C PDR1P12383 1068 aa9.35□□□□□ -0.91
PCI8YIL071C TRK1P12685 1235 aa9.35□□□□□ -0.91
PCI8YIL071C PCS60P38137 543 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
PCI8YIL071C RGA1P39083 1007 aa9.34□□□□□ -0.91
PCI8YIL071C RGA2Q06407 1009 aa9.34□□□□□ -0.91
PCI8YIL071C YEL077CQ3E7X8 1277 aa9.31□□□□□ -0.92
PCI8YIL071C MRF1P30775 413 aaPredicted RBP9.28□□□□□ -0.92
PCI8YIL071C KIC1P38692 1080 aa9.26□□□□□ -0.93
PCI8YIL071C SDH2P21801 266 aa9.25□□□□□ -0.93
PCI8YIL071C PEX21P50091 288 aa9.25□□□□□ -0.93
PCI8YIL071C IFH1P39520 1085 aa9.22□□□□□ -0.93
PCI8YIL071C YRR1Q12172 810 aa9.2□□□□□ -0.94
PCI8YIL071C PRT1P06103 763 aaKnown RBP9.19□□□□□ -0.94
PCI8YIL071C YDR090CQ03193 310 aa9.17□□□□□ -0.94
PCI8YIL071C BUD20Q08004 166 aaPredicted RBP9.17□□□□□ -0.94
PCI8YIL071C ERG12P07277 443 aa9.14□□□□□ -0.95
PCI8YIL071C CSC1Q06538 782 aa9.14□□□□□ -0.95
PCI8YIL071C TFB4Q12004 338 aa9.14□□□□□ -0.95
PCI8YIL071C NPL4P33755 580 aa9.11□□□□□ -0.95
PCI8YIL071C STR2P47164 639 aa9.11□□□□□ -0.95
PCI8YIL071C TUM1Q08686 304 aaKnown RBP9.11□□□□□ -0.95
PCI8YIL071C NUD1P32336 851 aa9.1□□□□□ -0.95
PCI8YIL071C GAP1P19145 602 aaPredicted RBP9.09□□□□□ -0.95
PCI8YIL071C ISM1P48526 1002 aa9.09□□□□□ -0.95
PCI8YIL071C REF2P42073 533 aaPredicted RBP9.07□□□□□ -0.96
PCI8YIL071C BRE2P43132 505 aa9.04□□□□□ -0.96
PCI8YIL071C GCR2Q01722 534 aa9.04□□□□□ -0.96
PCI8YIL071C SPT16P32558 1035 aaKnown RBP9.03□□□□□ -0.96
PCI8YIL071C GCD11P32481 527 aaKnown RBP9.01□□□□□ -0.97
PCI8YIL071C YPL062WQ02781 134 aa9.01□□□□□ -0.97
PCI8YIL071C YPR148CQ06523 435 aa9.01□□□□□ -0.97
PCI8YIL071C ORC6P38826 435 aa9□□□□□ -0.97
PCI8YIL071C CST6P40535 587 aa9□□□□□ -0.97
PCI8YIL071C AIR1P40507 360 aaKnown RBP8.99□□□□□ -0.97
PCI8YIL071C MAK21Q12176 1025 aaKnown RBP8.97□□□□□ -0.97
PCI8YIL071C GBP2P25555 427 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
PCI8YIL071C LAM6Q08001 693 aa8.96□□□□□ -0.98
PCI8YIL071C TY1A-DR4O74302 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-HP0C2I4 478 aaKnown RBP8.94□□□□□ -0.98
PCI8YIL071C TY1A-AP0CX57 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-PR1P0CX58 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-ORP0CX59 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-PR2P0CX60 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-DR5P0CX65 440 aa8.94□□□□□ -0.98
PCI8YIL071C TY1A-ER2P0CX66 440 aa8.94□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms