RNA–Protein interactions for RNA: YHR086W

NAM8, Transcript of RNA binding protein, component of the U1 snRNP protein, yeastyeast

Gene NAM8, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NAM8YHR086W SAS10Q12136 610 aaPredicted RBP12.98□□□□□ -0.33
NAM8YHR086W STH1P32597 1359 aa12.97□□□□□ -0.33
NAM8YHR086W SNT2P53127 1403 aa12.96□□□□□ -0.34
NAM8YHR086W ULS1Q08562 1619 aa12.96□□□□□ -0.34
NAM8YHR086W YRF1-1P0CX20 1796 aa12.93□□□□□ -0.34
NAM8YHR086W YRF1-5P0CX21 1796 aa12.93□□□□□ -0.34
NAM8YHR086W YRF1-8P0CX22 1796 aa12.93□□□□□ -0.34
NAM8YHR086W PDR15Q04182 1529 aaKnown RBP12.93□□□□□ -0.34
NAM8YHR086W NUP159P40477 1460 aa12.92□□□□□ -0.34
NAM8YHR086W TAF7Q05021 590 aa12.89□□□□□ -0.35
NAM8YHR086W GEA2P39993 1459 aaKnown RBP12.81□□□□□ -0.36
NAM8YHR086W IRC20Q06554 1556 aa12.78□□□□□ -0.36
NAM8YHR086W VPS15P22219 1454 aa12.76□□□□□ -0.37
NAM8YHR086W GEA1P47102 1408 aaPredicted RBP12.76□□□□□ -0.37
NAM8YHR086W LTE1P07866 1435 aa12.75□□□□□ -0.37
NAM8YHR086W RTT106P40161 455 aa12.74□□□□□ -0.37
NAM8YHR086W PDR12Q02785 1511 aa12.74□□□□□ -0.37
NAM8YHR086W SPO14P36126 1683 aa12.74□□□□□ -0.37
NAM8YHR086W IFH1P39520 1085 aa12.71□□□□□ -0.37
NAM8YHR086W TY3B-GQ99315 1547 aa12.7□□□□□ -0.38
NAM8YHR086W MET10P39692 1035 aa12.69□□□□□ -0.38
NAM8YHR086W YBT1P32386 1661 aa12.68□□□□□ -0.38
NAM8YHR086W GDB1Q06625 1536 aa12.67□□□□□ -0.38
NAM8YHR086W BNI1P41832 1953 aa12.61□□□□□ -0.39
NAM8YHR086W CAT8P39113 1433 aa12.61□□□□□ -0.39
NAM8YHR086W PDR10P51533 1564 aa12.61□□□□□ -0.39
NAM8YHR086W NUP157P40064 1391 aaKnown RBP12.58□□□□□ -0.4
NAM8YHR086W NUP170P38181 1502 aa12.55□□□□□ -0.4
NAM8YHR086W IQG1Q12280 1495 aa12.53□□□□□ -0.4
NAM8YHR086W ARO1P08566 1588 aaKnown RBP12.52□□□□□ -0.41
NAM8YHR086W DRS2P39524 1355 aa12.51□□□□□ -0.41
NAM8YHR086W IKI3Q06706 1349 aaKnown RBP12.51□□□□□ -0.41
NAM8YHR086W BUD3P25558 1636 aa12.49□□□□□ -0.41
NAM8YHR086W ITT1Q04638 464 aa12.48□□□□□ -0.41
NAM8YHR086W DOP1Q03921 1698 aa12.45□□□□□ -0.42
NAM8YHR086W SEC7P11075 2009 aaKnown RBP12.43□□□□□ -0.42
NAM8YHR086W YSP2Q06681 1438 aa12.4□□□□□ -0.42
NAM8YHR086W TRM3Q07527 1436 aa12.4□□□□□ -0.42
NAM8YHR086W SRB8P25648 1427 aa12.38□□□□□ -0.43
NAM8YHR086W CKB1P43639 278 aa12.38□□□□□ -0.43
NAM8YHR086W CHC1P22137 1653 aaKnown RBP12.37□□□□□ -0.43
NAM8YHR086W SSM4P40318 1319 aa12.36□□□□□ -0.43
NAM8YHR086W MMS1Q06211 1407 aa12.35□□□□□ -0.43
NAM8YHR086W DNF2Q12675 1612 aa12.28□□□□□ -0.44
NAM8YHR086W BNR1P40450 1375 aa12.27□□□□□ -0.45
NAM8YHR086W BUD21Q08492 214 aaPredicted RBP12.19□□□□□ -0.46
NAM8YHR086W GCN2P15442 1659 aa12.17□□□□□ -0.46
NAM8YHR086W YOR093CQ12275 1648 aa12.14□□□□□ -0.47
NAM8YHR086W NUP188P52593 1655 aaKnown RBP12.08□□□□□ -0.48
NAM8YHR086W VMR1P38735 1592 aa12.06□□□□□ -0.48
NAM8YHR086W ABP1P15891 592 aaKnown RBP12.05□□□□□ -0.48
NAM8YHR086W PDR5P33302 1511 aaKnown RBP12.04□□□□□ -0.48
NAM8YHR086W DNF3Q12674 1656 aa11.99□□□□□ -0.49
NAM8YHR086W YAP3P38749 330 aa11.98□□□□□ -0.49
NAM8YHR086W IML1P47170 1584 aa11.97□□□□□ -0.49
NAM8YHR086W URN1Q06525 465 aaKnown RBP11.96□□□□□ -0.49
NAM8YHR086W IPL1P38991 367 aa11.92□□□□□ -0.5
NAM8YHR086W PDR11P40550 1411 aa11.92□□□□□ -0.5
NAM8YHR086W HAP1P0CE41 1502 aa11.91□□□□□ -0.5
NAM8YHR086W TYS1P36421 394 aaKnown RBP11.88□□□□□ -0.51
NAM8YHR086W RAV1P47104 1357 aa11.85□□□□□ -0.51
NAM8YHR086W MIF2P35201 549 aa11.84□□□□□ -0.51
NAM8YHR086W PAF1P38351 445 aa11.84□□□□□ -0.51
NAM8YHR086W NOP7P53261 605 aaKnown RBP11.81□□□□□ -0.52
NAM8YHR086W BFR2Q06631 534 aaKnown RBP11.81□□□□□ -0.52
NAM8YHR086W RTC1Q08281 1341 aa11.78□□□□□ -0.52
NAM8YHR086W NUP192P47054 1683 aa11.77□□□□□ -0.53
NAM8YHR086W MAK10Q02197 733 aa11.76□□□□□ -0.53
NAM8YHR086W USO1P25386 1790 aa11.73□□□□□ -0.53
NAM8YHR086W TY1B-NL2Q99337 1749 aaKnown RBP11.67□□□□□ -0.54
NAM8YHR086W BCK1Q01389 1478 aa11.66□□□□□ -0.54
NAM8YHR086W TY3B-IQ7LHG5 1498 aaKnown RBP11.6□□□□□ -0.55
NAM8YHR086W ESL2P36168 1195 aa11.6□□□□□ -0.55
NAM8YHR086W ALD4P46367 519 aaKnown RBP11.6□□□□□ -0.55
NAM8YHR086W RAD9P14737 1309 aa11.6□□□□□ -0.55
NAM8YHR086W TAF5P38129 798 aa11.58□□□□□ -0.55
NAM8YHR086W KRE5P22023 1365 aa11.58□□□□□ -0.56
NAM8YHR086W CFT1Q06632 1357 aaKnown RBP11.58□□□□□ -0.56
NAM8YHR086W CAB1Q04430 367 aa11.55□□□□□ -0.56
NAM8YHR086W MRX12P47084 519 aa11.54□□□□□ -0.56
NAM8YHR086W RIA1P53893 1110 aa11.51□□□□□ -0.57
NAM8YHR086W POL5P39985 1022 aaKnown RBP11.5□□□□□ -0.57
NAM8YHR086W YFR006WP43590 535 aa11.5□□□□□ -0.57
NAM8YHR086W YMR196WQ04336 1088 aa11.5□□□□□ -0.57
NAM8YHR086W TAF8Q03750 510 aa11.49□□□□□ -0.57
NAM8YHR086W KIP3P53086 805 aaKnown RBP11.48□□□□□ -0.57
NAM8YHR086W YLR419WQ06698 1435 aaKnown RBP11.47□□□□□ -0.57
NAM8YHR086W YNR029CP53729 429 aaKnown RBP11.45□□□□□ -0.58
NAM8YHR086W ORC1P54784 914 aaPredicted RBP11.45□□□□□ -0.58
NAM8YHR086W SPE2P21182 396 aa11.44□□□□□ -0.58
NAM8YHR086W NAP1P25293 417 aaKnown RBP11.44□□□□□ -0.58
NAM8YHR086W THI12P42883 340 aa11.44□□□□□ -0.58
NAM8YHR086W THI5P43534 340 aa11.44□□□□□ -0.58
NAM8YHR086W THI11P47183 340 aa11.44□□□□□ -0.58
NAM8YHR086W THI13Q07748 340 aa11.44□□□□□ -0.58
NAM8YHR086W FAP1P53971 965 aa11.42□□□□□ -0.58
NAM8YHR086W MLP1Q02455 1875 aaKnown RBP11.37□□□□□ -0.59
NAM8YHR086W MHP1P43638 1398 aa11.36□□□□□ -0.59
NAM8YHR086W SCT1P32784 759 aa11.34□□□□□ -0.59
NAM8YHR086W RCM1P53972 490 aa11.34□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms