RNA–Protein interactions for RNA: YHR050W

SMF2, Transcript of Divalent metal ion transporter involved in manganese homeostasis, yeastyeast

Gene SMF2, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF2YHR050W MRPL32P25348 183 aa8.22□□□□□ -1.09
SMF2YHR050W IKI3Q06706 1349 aaKnown RBP8.22□□□□□ -1.09
SMF2YHR050W CDC25P04821 1589 aa8.21□□□□□ -1.09
SMF2YHR050W PDR15Q04182 1529 aaKnown RBP8.2□□□□□ -1.1
SMF2YHR050W TSC11P40061 1430 aa8.19□□□□□ -1.1
SMF2YHR050W PAN1P32521 1480 aa8.19□□□□□ -1.1
SMF2YHR050W SPT21P35209 758 aa8.18□□□□□ -1.1
SMF2YHR050W VTH1P40438 1549 aa8.18□□□□□ -1.1
SMF2YHR050W VTH2P40890 1549 aa8.18□□□□□ -1.1
SMF2YHR050W IFH1P39520 1085 aa8.18□□□□□ -1.1
SMF2YHR050W GEA1P47102 1408 aaPredicted RBP8.16□□□□□ -1.1
SMF2YHR050W ULS1Q08562 1619 aa8.16□□□□□ -1.1
SMF2YHR050W TY1B-JR2P47100 1755 aaKnown RBP8.14□□□□□ -1.11
SMF2YHR050W TY1B-ER2Q03619 1755 aa8.14□□□□□ -1.11
SMF2YHR050W TY1B-MR1Q04214 1755 aa8.14□□□□□ -1.11
SMF2YHR050W TY1B-MR2Q04670 1755 aaKnown RBP8.14□□□□□ -1.11
SMF2YHR050W TY1B-LR1Q12088 1755 aaKnown RBP8.14□□□□□ -1.11
SMF2YHR050W TY1B-NL1Q12112 1755 aa8.14□□□□□ -1.11
SMF2YHR050W TY1B-GR1Q12141 1755 aa8.14□□□□□ -1.11
SMF2YHR050W TY1B-BLQ12490 1755 aa8.14□□□□□ -1.11
SMF2YHR050W SNT2P53127 1403 aa8.12□□□□□ -1.11
SMF2YHR050W ESC1Q03661 1658 aaKnown RBP8.12□□□□□ -1.11
SMF2YHR050W NUP170P38181 1502 aa8.11□□□□□ -1.11
SMF2YHR050W RTT106P40161 455 aa8.08□□□□□ -1.12
SMF2YHR050W RPA190P10964 1664 aaKnown RBP8.07□□□□□ -1.12
SMF2YHR050W SSM4P40318 1319 aa8.06□□□□□ -1.12
SMF2YHR050W DNF1P32660 1571 aa8.05□□□□□ -1.12
SMF2YHR050W NTE1Q04958 1679 aa8.05□□□□□ -1.12
SMF2YHR050W GEA2P39993 1459 aaKnown RBP8.04□□□□□ -1.12
SMF2YHR050W TY3B-GQ99315 1547 aa8.04□□□□□ -1.12
SMF2YHR050W RPO21P04050 1733 aaKnown RBP8.03□□□□□ -1.12
SMF2YHR050W YKR023WP36119 530 aaKnown RBP8.02□□□□□ -1.13
SMF2YHR050W IRC20Q06554 1556 aa8□□□□□ -1.13
SMF2YHR050W CAT8P39113 1433 aa8□□□□□ -1.13
SMF2YHR050W YBT1P32386 1661 aa8□□□□□ -1.13
SMF2YHR050W VPS15P22219 1454 aa7.99□□□□□ -1.13
SMF2YHR050W RIM101P33400 625 aa7.98□□□□□ -1.13
SMF2YHR050W NUP159P40477 1460 aa7.98□□□□□ -1.13
SMF2YHR050W CDC27P38042 758 aa7.95□□□□□ -1.14
SMF2YHR050W MET10P39692 1035 aa7.94□□□□□ -1.14
SMF2YHR050W PDR12Q02785 1511 aa7.91□□□□□ -1.14
SMF2YHR050W SRB8P25648 1427 aa7.91□□□□□ -1.14
SMF2YHR050W MET5P47169 1442 aa7.91□□□□□ -1.14
SMF2YHR050W PDR10P51533 1564 aa7.91□□□□□ -1.14
SMF2YHR050W YRF1-1P0CX20 1796 aa7.9□□□□□ -1.14
SMF2YHR050W YRF1-5P0CX21 1796 aa7.9□□□□□ -1.14
SMF2YHR050W YRF1-8P0CX22 1796 aa7.9□□□□□ -1.14
SMF2YHR050W GDB1Q06625 1536 aa7.9□□□□□ -1.15
SMF2YHR050W SPO14P36126 1683 aa7.89□□□□□ -1.15
SMF2YHR050W ARO1P08566 1588 aaKnown RBP7.89□□□□□ -1.15
SMF2YHR050W CKB1P43639 278 aa7.89□□□□□ -1.15
SMF2YHR050W NUP157P40064 1391 aaKnown RBP7.87□□□□□ -1.15
SMF2YHR050W HOP09932 586 aa7.84□□□□□ -1.15
SMF2YHR050W TFC8Q12308 588 aa7.84□□□□□ -1.15
SMF2YHR050W NSR1P27476 414 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
SMF2YHR050W BUD21Q08492 214 aaPredicted RBP7.83□□□□□ -1.16
SMF2YHR050W GCN2P15442 1659 aa7.82□□□□□ -1.16
SMF2YHR050W NOP2P40991 618 aaKnown RBP7.82□□□□□ -1.16
SMF2YHR050W BUD3P25558 1636 aa7.81□□□□□ -1.16
SMF2YHR050W MMS1Q06211 1407 aa7.81□□□□□ -1.16
SMF2YHR050W DCD1P06773 312 aa7.81□□□□□ -1.16
SMF2YHR050W YSP2Q06681 1438 aa7.8□□□□□ -1.16
SMF2YHR050W POL5P39985 1022 aaKnown RBP7.79□□□□□ -1.16
SMF2YHR050W YGL015CP33199 130 aa7.78□□□□□ -1.16
SMF2YHR050W IQG1Q12280 1495 aa7.78□□□□□ -1.16
SMF2YHR050W SEC7P11075 2009 aaKnown RBP7.75□□□□□ -1.17
SMF2YHR050W OXP1P28273 1286 aa7.75□□□□□ -1.17
SMF2YHR050W NOP7P53261 605 aaKnown RBP7.74□□□□□ -1.17
SMF2YHR050W BNR1P40450 1375 aa7.73□□□□□ -1.17
SMF2YHR050W PAF1P38351 445 aa7.71□□□□□ -1.18
SMF2YHR050W LTE1P07866 1435 aa7.7□□□□□ -1.18
SMF2YHR050W PDR5P33302 1511 aaKnown RBP7.68□□□□□ -1.18
SMF2YHR050W YOR093CQ12275 1648 aa7.67□□□□□ -1.18
SMF2YHR050W CHC1P22137 1653 aaKnown RBP7.65□□□□□ -1.18
SMF2YHR050W TRM3Q07527 1436 aa7.65□□□□□ -1.19
SMF2YHR050W DOP1Q03921 1698 aa7.65□□□□□ -1.19
SMF2YHR050W SEC3P33332 1336 aaKnown RBP7.64□□□□□ -1.19
SMF2YHR050W MAP2P38174 421 aaKnown RBP7.63□□□□□ -1.19
SMF2YHR050W DRS2P39524 1355 aa7.63□□□□□ -1.19
SMF2YHR050W BCH2P36122 765 aa7.61□□□□□ -1.19
SMF2YHR050W UBP10P53874 792 aaPredicted RBP7.61□□□□□ -1.19
SMF2YHR050W ENP1P38333 483 aaKnown RBP7.6□□□□□ -1.19
SMF2YHR050W RAV1P47104 1357 aa7.59□□□□□ -1.19
SMF2YHR050W RTC1Q08281 1341 aa7.59□□□□□ -1.19
SMF2YHR050W NUP188P52593 1655 aaKnown RBP7.58□□□□□ -1.2
SMF2YHR050W SPT7P35177 1332 aa7.57□□□□□ -1.2
SMF2YHR050W VMR1P38735 1592 aa7.57□□□□□ -1.2
SMF2YHR050W PDR11P40550 1411 aa7.57□□□□□ -1.2
SMF2YHR050W ORC1P54784 914 aaPredicted RBP7.56□□□□□ -1.2
SMF2YHR050W IML1P47170 1584 aa7.55□□□□□ -1.2
SMF2YHR050W MHP1P43638 1398 aa7.55□□□□□ -1.2
SMF2YHR050W YIL055CP40523 627 aaKnown RBP7.55□□□□□ -1.2
SMF2YHR050W TY3B-IQ7LHG5 1498 aaKnown RBP7.55□□□□□ -1.2
SMF2YHR050W ITT1Q04638 464 aa7.54□□□□□ -1.2
SMF2YHR050W ESL2P36168 1195 aa7.54□□□□□ -1.2
SMF2YHR050W SCY1P53009 804 aa7.54□□□□□ -1.2
SMF2YHR050W TAF5P38129 798 aa7.53□□□□□ -1.2
SMF2YHR050W PTP3P40048 928 aa7.53□□□□□ -1.2
SMF2YHR050W URN1Q06525 465 aaKnown RBP7.53□□□□□ -1.2
SMF2YHR050W YAH1Q12184 172 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms