RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W TY1B-GR1Q12141 1755 aa17.56■□□□□ 0.4
SNF6YHL025W TY1B-BLQ12490 1755 aa17.56■□□□□ 0.4
SNF6YHL025W NTE1Q04958 1679 aa17.52■□□□□ 0.4
SNF6YHL025W VPS15P22219 1454 aa17.52■□□□□ 0.4
SNF6YHL025W TSC11P40061 1430 aa17.5■□□□□ 0.39
SNF6YHL025W MMS1Q06211 1407 aa17.48■□□□□ 0.39
SNF6YHL025W VTH1P40438 1549 aa17.48■□□□□ 0.39
SNF6YHL025W VTH2P40890 1549 aa17.48■□□□□ 0.39
SNF6YHL025W DRS2P39524 1355 aa17.45■□□□□ 0.38
SNF6YHL025W RPO21P04050 1733 aaKnown RBP17.44■□□□□ 0.38
SNF6YHL025W ABP1P15891 592 aaKnown RBP17.42■□□□□ 0.38
SNF6YHL025W SNQ2P32568 1501 aaKnown RBP17.31■□□□□ 0.36
SNF6YHL025W SAS10Q12136 610 aaPredicted RBP17.31■□□□□ 0.36
SNF6YHL025W IRC20Q06554 1556 aa17.31■□□□□ 0.36
SNF6YHL025W STH1P32597 1359 aa17.27■□□□□ 0.35
SNF6YHL025W SNT2P53127 1403 aa17.26■□□□□ 0.35
SNF6YHL025W TAF7Q05021 590 aa17.23■□□□□ 0.35
SNF6YHL025W YFR006WP43590 535 aa17.22■□□□□ 0.35
SNF6YHL025W DNF2Q12675 1612 aa17.19■□□□□ 0.34
SNF6YHL025W NUP170P38181 1502 aa17.19■□□□□ 0.34
SNF6YHL025W MLP2P40457 1679 aa17.15■□□□□ 0.34
SNF6YHL025W SPO14P36126 1683 aa17.12■□□□□ 0.33
SNF6YHL025W PDR15Q04182 1529 aaKnown RBP17.11■□□□□ 0.33
SNF6YHL025W MET10P39692 1035 aa17.09■□□□□ 0.33
SNF6YHL025W ULS1Q08562 1619 aa17.09■□□□□ 0.33
SNF6YHL025W PDR12Q02785 1511 aa17.04■□□□□ 0.32
SNF6YHL025W GEA1P47102 1408 aaPredicted RBP16.96■□□□□ 0.3
SNF6YHL025W DOP1Q03921 1698 aa16.95■□□□□ 0.3
SNF6YHL025W RTT106P40161 455 aa16.94■□□□□ 0.3
SNF6YHL025W IFH1P39520 1085 aa16.93■□□□□ 0.3
SNF6YHL025W GDB1Q06625 1536 aa16.92■□□□□ 0.3
SNF6YHL025W TRM3Q07527 1436 aa16.9■□□□□ 0.3
SNF6YHL025W IQG1Q12280 1495 aa16.9■□□□□ 0.3
SNF6YHL025W PDR10P51533 1564 aa16.85■□□□□ 0.29
SNF6YHL025W NUP157P40064 1391 aaKnown RBP16.83■□□□□ 0.28
SNF6YHL025W YOR093CQ12275 1648 aa16.81■□□□□ 0.28
SNF6YHL025W TY3B-GQ99315 1547 aa16.79■□□□□ 0.28
SNF6YHL025W BUD3P25558 1636 aa16.78■□□□□ 0.28
SNF6YHL025W CAT8P39113 1433 aa16.77■□□□□ 0.27
SNF6YHL025W IKI3Q06706 1349 aaKnown RBP16.74■□□□□ 0.27
SNF6YHL025W YBT1P32386 1661 aa16.69■□□□□ 0.26
SNF6YHL025W ARO1P08566 1588 aaKnown RBP16.68■□□□□ 0.26
SNF6YHL025W CHC1P22137 1653 aaKnown RBP16.65■□□□□ 0.26
SNF6YHL025W DNF3Q12674 1656 aa16.5■□□□□ 0.23
SNF6YHL025W SSM4P40318 1319 aa16.49■□□□□ 0.23
SNF6YHL025W SRB8P25648 1427 aa16.48■□□□□ 0.23
SNF6YHL025W SEC7P11075 2009 aaKnown RBP16.48■□□□□ 0.23
SNF6YHL025W CKB1P43639 278 aa16.45■□□□□ 0.22
SNF6YHL025W YSP2Q06681 1438 aa16.42■□□□□ 0.22
SNF6YHL025W YAP3P38749 330 aa16.35■□□□□ 0.21
SNF6YHL025W BNR1P40450 1375 aa16.3■□□□□ 0.2
SNF6YHL025W BUD21Q08492 214 aaPredicted RBP16.25■□□□□ 0.19
SNF6YHL025W MAK10Q02197 733 aa16.21■□□□□ 0.19
SNF6YHL025W URN1Q06525 465 aaKnown RBP16.13■□□□□ 0.17
SNF6YHL025W GCN2P15442 1659 aa16.12■□□□□ 0.17
SNF6YHL025W USO1P25386 1790 aa16.08■□□□□ 0.17
SNF6YHL025W HAP1P0CE41 1502 aa15.99■□□□□ 0.15
SNF6YHL025W IML1P47170 1584 aa15.96■□□□□ 0.15
SNF6YHL025W PDR5P33302 1511 aaKnown RBP15.96■□□□□ 0.15
SNF6YHL025W NUP188P52593 1655 aaKnown RBP15.94■□□□□ 0.14
SNF6YHL025W IPL1P38991 367 aa15.93■□□□□ 0.14
SNF6YHL025W VMR1P38735 1592 aa15.92■□□□□ 0.14
SNF6YHL025W TY1B-NL2Q99337 1749 aaKnown RBP15.89■□□□□ 0.13
SNF6YHL025W PAF1P38351 445 aa15.86■□□□□ 0.13
SNF6YHL025W YMR196WQ04336 1088 aa15.86■□□□□ 0.13
SNF6YHL025W THI12P42883 340 aa15.83■□□□□ 0.12
SNF6YHL025W THI5P43534 340 aa15.83■□□□□ 0.12
SNF6YHL025W THI11P47183 340 aa15.83■□□□□ 0.12
SNF6YHL025W NOP7P53261 605 aaKnown RBP15.83■□□□□ 0.12
SNF6YHL025W THI13Q07748 340 aa15.83■□□□□ 0.12
SNF6YHL025W TYS1P36421 394 aaKnown RBP15.82■□□□□ 0.12
SNF6YHL025W PDR11P40550 1411 aa15.79■□□□□ 0.12
SNF6YHL025W BFR2Q06631 534 aaKnown RBP15.78■□□□□ 0.12
SNF6YHL025W RAV1P47104 1357 aa15.77■□□□□ 0.12
SNF6YHL025W RTC1Q08281 1341 aa15.7■□□□□ 0.1
SNF6YHL025W YAH1Q12184 172 aaKnown RBP15.53■□□□□ 0.08
SNF6YHL025W NUP192P47054 1683 aa15.53■□□□□ 0.08
SNF6YHL025W POL5P39985 1022 aaKnown RBP15.51■□□□□ 0.07
SNF6YHL025W ESL2P36168 1195 aa15.5■□□□□ 0.07
SNF6YHL025W TY3B-IQ7LHG5 1498 aaKnown RBP15.47■□□□□ 0.07
SNF6YHL025W TAF5P38129 798 aa15.46■□□□□ 0.07
SNF6YHL025W CFT1Q06632 1357 aaKnown RBP15.45■□□□□ 0.06
SNF6YHL025W BCK1Q01389 1478 aa15.45■□□□□ 0.06
SNF6YHL025W ALD4P46367 519 aaKnown RBP15.43■□□□□ 0.06
SNF6YHL025W KRE5P22023 1365 aa15.43■□□□□ 0.06
SNF6YHL025W GLN1P32288 370 aaKnown RBP15.42■□□□□ 0.06
SNF6YHL025W PTP3P40048 928 aa15.4■□□□□ 0.06
SNF6YHL025W RAD9P14737 1309 aa15.4■□□□□ 0.06
SNF6YHL025W RIA1P53893 1110 aa15.37■□□□□ 0.05
SNF6YHL025W APP1P53933 587 aa15.37■□□□□ 0.05
SNF6YHL025W MRX12P47084 519 aa15.35■□□□□ 0.05
SNF6YHL025W YIL055CP40523 627 aaKnown RBP15.34■□□□□ 0.05
SNF6YHL025W YNR029CP53729 429 aaKnown RBP15.34■□□□□ 0.05
SNF6YHL025W CAB1Q04430 367 aa15.34■□□□□ 0.05
SNF6YHL025W KIP3P53086 805 aaKnown RBP15.33■□□□□ 0.04
SNF6YHL025W YLR419WQ06698 1435 aaKnown RBP15.33■□□□□ 0.04
SNF6YHL025W NAP1P25293 417 aaKnown RBP15.32■□□□□ 0.04
SNF6YHL025W SCT1P32784 759 aa15.3■□□□□ 0.04
SNF6YHL025W ORC1P54784 914 aaPredicted RBP15.3■□□□□ 0.04
SNF6YHL025W TAF8Q03750 510 aa15.3■□□□□ 0.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms