RNA–Protein interactions for RNA: YGR141W

VPS62, Transcript of Vacuolar protein sorting (VPS) protein, yeastyeast

Gene VPS62, Length 1,404 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS62YGR141W TY1B-JR2P47100 1755 aaKnown RBP12.8□□□□□ -0.36
VPS62YGR141W TY1B-ER2Q03619 1755 aa12.8□□□□□ -0.36
VPS62YGR141W TY1B-MR1Q04214 1755 aa12.8□□□□□ -0.36
VPS62YGR141W TY1B-MR2Q04670 1755 aaKnown RBP12.8□□□□□ -0.36
VPS62YGR141W TY1B-LR1Q12088 1755 aaKnown RBP12.8□□□□□ -0.36
VPS62YGR141W TY1B-NL1Q12112 1755 aa12.8□□□□□ -0.36
VPS62YGR141W TY1B-GR1Q12141 1755 aa12.8□□□□□ -0.36
VPS62YGR141W TY1B-BLQ12490 1755 aa12.8□□□□□ -0.36
VPS62YGR141W MTC1P47018 478 aaKnown RBP12.79□□□□□ -0.36
VPS62YGR141W CAT8P39113 1433 aa12.79□□□□□ -0.36
VPS62YGR141W ESC1Q03661 1658 aaKnown RBP12.78□□□□□ -0.36
VPS62YGR141W DNF1P32660 1571 aa12.75□□□□□ -0.37
VPS62YGR141W TY3B-GQ99315 1547 aa12.75□□□□□ -0.37
VPS62YGR141W RPA190P10964 1664 aaKnown RBP12.74□□□□□ -0.37
VPS62YGR141W VPS15P22219 1454 aa12.72□□□□□ -0.37
VPS62YGR141W NTE1Q04958 1679 aa12.72□□□□□ -0.37
VPS62YGR141W IRC20Q06554 1556 aa12.71□□□□□ -0.37
VPS62YGR141W NUP159P40477 1460 aa12.69□□□□□ -0.38
VPS62YGR141W RPO21P04050 1733 aaKnown RBP12.68□□□□□ -0.38
VPS62YGR141W MET10P39692 1035 aa12.68□□□□□ -0.38
VPS62YGR141W YBT1P32386 1661 aa12.63□□□□□ -0.39
VPS62YGR141W SRB8P25648 1427 aa12.63□□□□□ -0.39
VPS62YGR141W MET5P47169 1442 aa12.62□□□□□ -0.39
VPS62YGR141W PDR12Q02785 1511 aa12.61□□□□□ -0.39
VPS62YGR141W PDR10P51533 1564 aa12.56□□□□□ -0.4
VPS62YGR141W CKB1P43639 278 aa12.55□□□□□ -0.4
VPS62YGR141W NUP157P40064 1391 aaKnown RBP12.54□□□□□ -0.4
VPS62YGR141W GDB1Q06625 1536 aa12.52□□□□□ -0.4
VPS62YGR141W MMS1Q06211 1407 aa12.51□□□□□ -0.41
VPS62YGR141W ARO1P08566 1588 aaKnown RBP12.51□□□□□ -0.41
VPS62YGR141W BUD21Q08492 214 aaPredicted RBP12.49□□□□□ -0.41
VPS62YGR141W POL5P39985 1022 aaKnown RBP12.47□□□□□ -0.41
VPS62YGR141W SPO14P36126 1683 aa12.46□□□□□ -0.41
VPS62YGR141W YRF1-1P0CX20 1796 aa12.44□□□□□ -0.42
VPS62YGR141W YRF1-5P0CX21 1796 aa12.44□□□□□ -0.42
VPS62YGR141W YRF1-8P0CX22 1796 aa12.44□□□□□ -0.42
VPS62YGR141W YSP2Q06681 1438 aa12.42□□□□□ -0.42
VPS62YGR141W GCN2P15442 1659 aa12.42□□□□□ -0.42
VPS62YGR141W IQG1Q12280 1495 aa12.41□□□□□ -0.42
VPS62YGR141W BUD3P25558 1636 aa12.4□□□□□ -0.42
VPS62YGR141W NOP7P53261 605 aaKnown RBP12.37□□□□□ -0.43
VPS62YGR141W PAF1P38351 445 aa12.34□□□□□ -0.43
VPS62YGR141W BNR1P40450 1375 aa12.32□□□□□ -0.44
VPS62YGR141W SEC3P33332 1336 aaKnown RBP12.28□□□□□ -0.44
VPS62YGR141W LTE1P07866 1435 aa12.27□□□□□ -0.44
VPS62YGR141W PDR5P33302 1511 aaKnown RBP12.26□□□□□ -0.45
VPS62YGR141W TRM3Q07527 1436 aa12.22□□□□□ -0.45
VPS62YGR141W SEC7P11075 2009 aaKnown RBP12.21□□□□□ -0.45
VPS62YGR141W NSR1P27476 414 aaKnown RBP RIP-Chip data12.2□□□□□ -0.46 RIP-Chip
VPS62YGR141W ENP1P38333 483 aaKnown RBP12.2□□□□□ -0.46
VPS62YGR141W DRS2P39524 1355 aa12.17□□□□□ -0.46
VPS62YGR141W YOR093CQ12275 1648 aa12.16□□□□□ -0.46
VPS62YGR141W RAV1P47104 1357 aa12.14□□□□□ -0.47
VPS62YGR141W SCT1P32784 759 aa12.12□□□□□ -0.47
VPS62YGR141W RTC1Q08281 1341 aa12.12□□□□□ -0.47
VPS62YGR141W CHC1P22137 1653 aaKnown RBP12.11□□□□□ -0.47
VPS62YGR141W DOP1Q03921 1698 aa12.11□□□□□ -0.47
VPS62YGR141W MHP1P43638 1398 aa12.09□□□□□ -0.47
VPS62YGR141W SPT7P35177 1332 aa12.07□□□□□ -0.48
VPS62YGR141W URN1Q06525 465 aaKnown RBP12.07□□□□□ -0.48
VPS62YGR141W ESL2P36168 1195 aa12.05□□□□□ -0.48
VPS62YGR141W TY3B-IQ7LHG5 1498 aaKnown RBP12.05□□□□□ -0.48
VPS62YGR141W NUP188P52593 1655 aaKnown RBP12.01□□□□□ -0.49
VPS62YGR141W IML1P47170 1584 aa12.01□□□□□ -0.49
VPS62YGR141W PDR11P40550 1411 aa12.01□□□□□ -0.49
VPS62YGR141W VMR1P38735 1592 aa11.99□□□□□ -0.49
VPS62YGR141W TAF5P38129 798 aa11.97□□□□□ -0.49
VPS62YGR141W ORC1P54784 914 aaPredicted RBP11.97□□□□□ -0.49
VPS62YGR141W ITT1Q04638 464 aa11.97□□□□□ -0.49
VPS62YGR141W DNF2Q12675 1612 aa11.96□□□□□ -0.5
VPS62YGR141W IPL1P38991 367 aa11.95□□□□□ -0.5
VPS62YGR141W NOP2P40991 618 aaKnown RBP11.95□□□□□ -0.5
VPS62YGR141W KIP3P53086 805 aaKnown RBP11.93□□□□□ -0.5
VPS62YGR141W PDS5Q04264 1277 aa11.91□□□□□ -0.5
VPS62YGR141W YLR419WQ06698 1435 aaKnown RBP11.9□□□□□ -0.5
VPS62YGR141W PSD2P53037 1138 aaKnown RBP11.88□□□□□ -0.51
VPS62YGR141W TYS1P36421 394 aaKnown RBP11.86□□□□□ -0.51
VPS62YGR141W YAP3P38749 330 aa11.86□□□□□ -0.51
VPS62YGR141W BNI1P41832 1953 aa11.86□□□□□ -0.51
VPS62YGR141W SPE2P21182 396 aa11.85□□□□□ -0.51
VPS62YGR141W NAP1P25293 417 aaKnown RBP11.85□□□□□ -0.51
VPS62YGR141W ALD4P46367 519 aaKnown RBP11.83□□□□□ -0.52
VPS62YGR141W HAP1P0CE41 1502 aa11.83□□□□□ -0.52
VPS62YGR141W LEU3P08638 886 aa11.82□□□□□ -0.52
VPS62YGR141W PRS1P32895 427 aaKnown RBP11.81□□□□□ -0.52
VPS62YGR141W NUP192P47054 1683 aa11.81□□□□□ -0.52
VPS62YGR141W TAF8Q03750 510 aa11.77□□□□□ -0.52
VPS62YGR141W BCK1Q01389 1478 aa11.76□□□□□ -0.53
VPS62YGR141W DMA1P38823 416 aa11.75□□□□□ -0.53
VPS62YGR141W RAD9P14737 1309 aa11.74□□□□□ -0.53
VPS62YGR141W CHZ1P40019 153 aaPredicted RBP11.73□□□□□ -0.53
VPS62YGR141W IOC4Q04213 475 aa11.71□□□□□ -0.53
VPS62YGR141W FKH1P40466 484 aa11.69□□□□□ -0.54
VPS62YGR141W CAB1Q04430 367 aa11.69□□□□□ -0.54
VPS62YGR141W LEO1P38439 464 aa11.69□□□□□ -0.54
VPS62YGR141W RPP0P05317 312 aaKnown RBP11.68□□□□□ -0.54
VPS62YGR141W MRX12P47084 519 aa11.68□□□□□ -0.54
VPS62YGR141W RTG3P38165 486 aa11.66□□□□□ -0.54
VPS62YGR141W NST1P53935 1240 aa11.62□□□□□ -0.55
VPS62YGR141W CFT1Q06632 1357 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms