RNA–Protein interactions for RNA: YGR112W

SHY1, Transcript of Mitochondrial inner membrane protein required for complex IV assembly, yeastyeast

Gene SHY1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHY1YGR112W TY1B-GR1Q12141 1755 aa13.65□□□□□ -0.22
SHY1YGR112W TY1B-BLQ12490 1755 aa13.65□□□□□ -0.22
SHY1YGR112W ESC1Q03661 1658 aaKnown RBP13.64□□□□□ -0.23
SHY1YGR112W NUP170P38181 1502 aa13.64□□□□□ -0.23
SHY1YGR112W SSM4P40318 1319 aa13.59□□□□□ -0.23
SHY1YGR112W DNF1P32660 1571 aa13.58□□□□□ -0.24
SHY1YGR112W MTC1P47018 478 aaKnown RBP13.57□□□□□ -0.24
SHY1YGR112W RPA190P10964 1664 aaKnown RBP13.56□□□□□ -0.24
SHY1YGR112W TY3B-GQ99315 1547 aa13.55□□□□□ -0.24
SHY1YGR112W NTE1Q04958 1679 aa13.51□□□□□ -0.25
SHY1YGR112W RTT106P40161 455 aa13.51□□□□□ -0.25
SHY1YGR112W GEA2P39993 1459 aaKnown RBP13.48□□□□□ -0.25
SHY1YGR112W RPO21P04050 1733 aaKnown RBP13.48□□□□□ -0.25
SHY1YGR112W IRC20Q06554 1556 aa13.46□□□□□ -0.25
SHY1YGR112W YBT1P32386 1661 aa13.44□□□□□ -0.26
SHY1YGR112W VPS15P22219 1454 aa13.43□□□□□ -0.26
SHY1YGR112W NUP159P40477 1460 aa13.42□□□□□ -0.26
SHY1YGR112W CAT8P39113 1433 aa13.41□□□□□ -0.26
SHY1YGR112W GDB1Q06625 1536 aa13.3□□□□□ -0.28
SHY1YGR112W MET10P39692 1035 aa13.3□□□□□ -0.28
SHY1YGR112W PDR12Q02785 1511 aa13.29□□□□□ -0.28
SHY1YGR112W PDR10P51533 1564 aa13.28□□□□□ -0.28
SHY1YGR112W YRF1-1P0CX20 1796 aa13.27□□□□□ -0.29
SHY1YGR112W YRF1-5P0CX21 1796 aa13.27□□□□□ -0.29
SHY1YGR112W YRF1-8P0CX22 1796 aa13.27□□□□□ -0.29
SHY1YGR112W ARO1P08566 1588 aaKnown RBP13.26□□□□□ -0.29
SHY1YGR112W SRB8P25648 1427 aa13.26□□□□□ -0.29
SHY1YGR112W MET5P47169 1442 aa13.26□□□□□ -0.29
SHY1YGR112W SPO14P36126 1683 aa13.25□□□□□ -0.29
SHY1YGR112W CKB1P43639 278 aa13.24□□□□□ -0.29
SHY1YGR112W NUP157P40064 1391 aaKnown RBP13.23□□□□□ -0.29
SHY1YGR112W BUD3P25558 1636 aa13.14□□□□□ -0.31
SHY1YGR112W YSP2Q06681 1438 aa13.12□□□□□ -0.31
SHY1YGR112W BUD21Q08492 214 aaPredicted RBP13.1□□□□□ -0.31
SHY1YGR112W GCN2P15442 1659 aa13.08□□□□□ -0.31
SHY1YGR112W MMS1Q06211 1407 aa13.07□□□□□ -0.32
SHY1YGR112W IQG1Q12280 1495 aa13.05□□□□□ -0.32
SHY1YGR112W POL5P39985 1022 aaKnown RBP13.03□□□□□ -0.32
SHY1YGR112W BNR1P40450 1375 aa12.96□□□□□ -0.33
SHY1YGR112W NOP7P53261 605 aaKnown RBP12.94□□□□□ -0.34
SHY1YGR112W SEC7P11075 2009 aaKnown RBP12.93□□□□□ -0.34
SHY1YGR112W LTE1P07866 1435 aa12.91□□□□□ -0.34
SHY1YGR112W PAF1P38351 445 aa12.88□□□□□ -0.35
SHY1YGR112W YOR093CQ12275 1648 aa12.88□□□□□ -0.35
SHY1YGR112W NSR1P27476 414 aaKnown RBP RIP-Chip data12.87□□□□□ -0.35not detected
SHY1YGR112W PDR5P33302 1511 aaKnown RBP12.86□□□□□ -0.35
SHY1YGR112W CHC1P22137 1653 aaKnown RBP12.83□□□□□ -0.35
SHY1YGR112W BFR2Q06631 534 aaKnown RBP12.82□□□□□ -0.36
SHY1YGR112W TRM3Q07527 1436 aa12.81□□□□□ -0.36
SHY1YGR112W DOP1Q03921 1698 aa12.81□□□□□ -0.36
SHY1YGR112W DRS2P39524 1355 aa12.8□□□□□ -0.36
SHY1YGR112W PDR11P40550 1411 aa12.76□□□□□ -0.37
SHY1YGR112W SEC3P33332 1336 aaKnown RBP12.75□□□□□ -0.37
SHY1YGR112W VMR1P38735 1592 aa12.74□□□□□ -0.37
SHY1YGR112W RAV1P47104 1357 aa12.74□□□□□ -0.37
SHY1YGR112W SPT7P35177 1332 aa12.73□□□□□ -0.37
SHY1YGR112W ENP1P38333 483 aaKnown RBP12.72□□□□□ -0.37
SHY1YGR112W RTC1Q08281 1341 aa12.71□□□□□ -0.37
SHY1YGR112W ORC1P54784 914 aaPredicted RBP12.71□□□□□ -0.37
SHY1YGR112W NUP188P52593 1655 aaKnown RBP12.7□□□□□ -0.38
SHY1YGR112W IML1P47170 1584 aa12.69□□□□□ -0.38
SHY1YGR112W ITT1Q04638 464 aa12.68□□□□□ -0.38
SHY1YGR112W MHP1P43638 1398 aa12.66□□□□□ -0.38
SHY1YGR112W TY3B-IQ7LHG5 1498 aaKnown RBP12.65□□□□□ -0.38
SHY1YGR112W BNI1P41832 1953 aa12.65□□□□□ -0.38
SHY1YGR112W TAF5P38129 798 aa12.64□□□□□ -0.39
SHY1YGR112W DNF2Q12675 1612 aa12.61□□□□□ -0.39
SHY1YGR112W ESL2P36168 1195 aa12.59□□□□□ -0.39
SHY1YGR112W TYS1P36421 394 aaKnown RBP12.56□□□□□ -0.4
SHY1YGR112W NUP192P47054 1683 aa12.56□□□□□ -0.4
SHY1YGR112W IPL1P38991 367 aa12.55□□□□□ -0.4
SHY1YGR112W PSD2P53037 1138 aaKnown RBP12.55□□□□□ -0.4
SHY1YGR112W KIP3P53086 805 aaKnown RBP12.55□□□□□ -0.4
SHY1YGR112W URN1Q06525 465 aaKnown RBP12.55□□□□□ -0.4
SHY1YGR112W YLR419WQ06698 1435 aaKnown RBP12.54□□□□□ -0.4
SHY1YGR112W LEU3P08638 886 aa12.53□□□□□ -0.4
SHY1YGR112W PDS5Q04264 1277 aa12.5□□□□□ -0.41
SHY1YGR112W NOP2P40991 618 aaKnown RBP12.49□□□□□ -0.41
SHY1YGR112W SPE2P21182 396 aa12.44□□□□□ -0.42
SHY1YGR112W YAP3P38749 330 aa12.44□□□□□ -0.42
SHY1YGR112W SCT1P32784 759 aa12.42□□□□□ -0.42
SHY1YGR112W ALD4P46367 519 aaKnown RBP12.42□□□□□ -0.42
SHY1YGR112W PRS1P32895 427 aaKnown RBP12.41□□□□□ -0.42
SHY1YGR112W RAD9P14737 1309 aa12.4□□□□□ -0.42
SHY1YGR112W TAF8Q03750 510 aa12.4□□□□□ -0.42
SHY1YGR112W BCK1Q01389 1478 aa12.39□□□□□ -0.43
SHY1YGR112W NST1P53935 1240 aa12.38□□□□□ -0.43
SHY1YGR112W CAB1Q04430 367 aa12.34□□□□□ -0.43
SHY1YGR112W HAP1P0CE41 1502 aa12.33□□□□□ -0.44
SHY1YGR112W RTG3P38165 486 aa12.31□□□□□ -0.44
SHY1YGR112W CHZ1P40019 153 aaPredicted RBP12.31□□□□□ -0.44
SHY1YGR112W NAP1P25293 417 aaKnown RBP12.3□□□□□ -0.44
SHY1YGR112W FKH1P40466 484 aa12.27□□□□□ -0.45
SHY1YGR112W DNF3Q12674 1656 aa12.26□□□□□ -0.45
SHY1YGR112W MLP1Q02455 1875 aaKnown RBP12.26□□□□□ -0.45
SHY1YGR112W MRX12P47084 519 aa12.24□□□□□ -0.45
SHY1YGR112W KRE5P22023 1365 aa12.23□□□□□ -0.45
SHY1YGR112W RIA1P53893 1110 aa12.19□□□□□ -0.46
SHY1YGR112W YML133CQ03099 1374 aa12.18□□□□□ -0.46
SHY1YGR112W YLL067CQ07888 1374 aa12.18□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms