RNA–Protein interactions for RNA: YGR101W

PCP1, Transcript of Mitochondrial serine protease, yeast

Gene PCP1, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCP1	YGR101W	ITT1	Q04638	464 aa		13.46	□□□□□ -0.25
PCP1	YGR101W	TSC11	P40061	1430 aa		13.46	□□□□□ -0.26
PCP1	YGR101W	VTH1	P40438	1549 aa		13.45	□□□□□ -0.26
PCP1	YGR101W	VTH2	P40890	1549 aa		13.45	□□□□□ -0.26
PCP1	YGR101W	VPS15	P22219	1454 aa		13.45	□□□□□ -0.26
PCP1	YGR101W	RPO21	P04050	1733 aa	Known RBP	13.4	□□□□□ -0.26
PCP1	YGR101W	MYO4	P32492	1471 aa		13.36	□□□□□ -0.27
PCP1	YGR101W	DRS2	P39524	1355 aa		13.35	□□□□□ -0.27
PCP1	YGR101W	YTA7	P40340	1379 aa		13.34	□□□□□ -0.27
PCP1	YGR101W	MMS1	Q06211	1407 aa		13.34	□□□□□ -0.27
PCP1	YGR101W	SNT2	P53127	1403 aa		13.27	□□□□□ -0.29
PCP1	YGR101W	SNQ2	P32568	1501 aa	Known RBP	13.27	□□□□□ -0.29
PCP1	YGR101W	IRC20	Q06554	1556 aa		13.24	□□□□□ -0.29
PCP1	YGR101W	ABP1	P15891	592 aa	Known RBP	13.23	□□□□□ -0.29
PCP1	YGR101W	NUP170	P38181	1502 aa		13.18	□□□□□ -0.3
PCP1	YGR101W	DNF2	Q12675	1612 aa		13.17	□□□□□ -0.3
PCP1	YGR101W	SPO14	P36126	1683 aa		13.15	□□□□□ -0.3
PCP1	YGR101W	STH1	P32597	1359 aa		13.13	□□□□□ -0.31
PCP1	YGR101W	PDR12	Q02785	1511 aa		13.12	□□□□□ -0.31
PCP1	YGR101W	ULS1	Q08562	1619 aa		13.11	□□□□□ -0.31
PCP1	YGR101W	MET10	P39692	1035 aa		13.09	□□□□□ -0.31
PCP1	YGR101W	SAS10	Q12136	610 aa	Predicted RBP	13.08	□□□□□ -0.32
PCP1	YGR101W	MLP2	P40457	1679 aa		13.05	□□□□□ -0.32
PCP1	YGR101W	YFR006W	P43590	535 aa		13.04	□□□□□ -0.32
PCP1	YGR101W	GDB1	Q06625	1536 aa		13.02	□□□□□ -0.33
PCP1	YGR101W	DOP1	Q03921	1698 aa		12.99	□□□□□ -0.33
PCP1	YGR101W	TRM3	Q07527	1436 aa		12.99	□□□□□ -0.33
PCP1	YGR101W	IQG1	Q12280	1495 aa		12.97	□□□□□ -0.33
PCP1	YGR101W	RTT106	P40161	455 aa		12.96	□□□□□ -0.33
PCP1	YGR101W	TAF7	Q05021	590 aa		12.94	□□□□□ -0.34
PCP1	YGR101W	PDR15	Q04182	1529 aa	Known RBP	12.93	□□□□□ -0.34
PCP1	YGR101W	PDR10	P51533	1564 aa		12.92	□□□□□ -0.34
PCP1	YGR101W	NUP157	P40064	1391 aa	Known RBP	12.92	□□□□□ -0.34
PCP1	YGR101W	BUD3	P25558	1636 aa		12.91	□□□□□ -0.34
PCP1	YGR101W	YOR093C	Q12275	1648 aa		12.87	□□□□□ -0.35
PCP1	YGR101W	ARO1	P08566	1588 aa	Known RBP	12.81	□□□□□ -0.36
PCP1	YGR101W	IFH1	P39520	1085 aa		12.81	□□□□□ -0.36
PCP1	YGR101W	CHC1	P22137	1653 aa	Known RBP	12.8	□□□□□ -0.36
PCP1	YGR101W	GEA1	P47102	1408 aa	Predicted RBP	12.77	□□□□□ -0.37
PCP1	YGR101W	CAT8	P39113	1433 aa		12.7	□□□□□ -0.38
PCP1	YGR101W	TY3B-G	Q99315	1547 aa		12.67	□□□□□ -0.38
PCP1	YGR101W	DNF3	Q12674	1656 aa		12.66	□□□□□ -0.38
PCP1	YGR101W	YBT1	P32386	1661 aa		12.65	□□□□□ -0.38
PCP1	YGR101W	SEC7	P11075	2009 aa	Known RBP	12.61	□□□□□ -0.39
PCP1	YGR101W	YSP2	Q06681	1438 aa		12.59	□□□□□ -0.39
PCP1	YGR101W	IKI3	Q06706	1349 aa	Known RBP	12.57	□□□□□ -0.4
PCP1	YGR101W	BNR1	P40450	1375 aa		12.51	□□□□□ -0.41
PCP1	YGR101W	YAP3	P38749	330 aa		12.5	□□□□□ -0.41
PCP1	YGR101W	FAP1	P53971	965 aa		12.47	□□□□□ -0.41
PCP1	YGR101W	CKB1	P43639	278 aa		12.45	□□□□□ -0.42
PCP1	YGR101W	SSM4	P40318	1319 aa		12.41	□□□□□ -0.42
PCP1	YGR101W	SRB8	P25648	1427 aa		12.4	□□□□□ -0.42
PCP1	YGR101W	MAK10	Q02197	733 aa		12.38	□□□□□ -0.43
PCP1	YGR101W	URN1	Q06525	465 aa	Known RBP	12.35	□□□□□ -0.43
PCP1	YGR101W	HAP1	P0CE41	1502 aa		12.33	□□□□□ -0.44
PCP1	YGR101W	USO1	P25386	1790 aa		12.28	□□□□□ -0.44
PCP1	YGR101W	IML1	P47170	1584 aa		12.26	□□□□□ -0.45
PCP1	YGR101W	NUP188	P52593	1655 aa	Known RBP	12.26	□□□□□ -0.45
PCP1	YGR101W	BUD21	Q08492	214 aa	Predicted RBP	12.25	□□□□□ -0.45
PCP1	YGR101W	BFR2	Q06631	534 aa	Known RBP	12.22	□□□□□ -0.45
PCP1	YGR101W	IPL1	P38991	367 aa		12.21	□□□□□ -0.45
PCP1	YGR101W	TY1B-NL2	Q99337	1749 aa	Known RBP	12.2	□□□□□ -0.46
PCP1	YGR101W	VMR1	P38735	1592 aa		12.19	□□□□□ -0.46
PCP1	YGR101W	NOP2	P40991	618 aa	Known RBP	12.17	□□□□□ -0.46
PCP1	YGR101W	GCN2	P15442	1659 aa		12.15	□□□□□ -0.46
PCP1	YGR101W	YMR196W	Q04336	1088 aa		12.12	□□□□□ -0.47
PCP1	YGR101W	TYS1	P36421	394 aa	Known RBP	12.11	□□□□□ -0.47
PCP1	YGR101W	THI12	P42883	340 aa		12.08	□□□□□ -0.48
PCP1	YGR101W	THI5	P43534	340 aa		12.08	□□□□□ -0.48
PCP1	YGR101W	THI11	P47183	340 aa		12.08	□□□□□ -0.48
PCP1	YGR101W	THI13	Q07748	340 aa		12.08	□□□□□ -0.48
PCP1	YGR101W	PDR5	P33302	1511 aa	Known RBP	12.06	□□□□□ -0.48
PCP1	YGR101W	PAF1	P38351	445 aa		11.95	□□□□□ -0.5
PCP1	YGR101W	NOP7	P53261	605 aa	Known RBP	11.94	□□□□□ -0.5
PCP1	YGR101W	PDR11	P40550	1411 aa		11.92	□□□□□ -0.5
PCP1	YGR101W	CFT1	Q06632	1357 aa	Known RBP	11.88	□□□□□ -0.51
PCP1	YGR101W	RAV1	P47104	1357 aa		11.87	□□□□□ -0.51
PCP1	YGR101W	YAH1	Q12184	172 aa	Known RBP	11.85	□□□□□ -0.51
PCP1	YGR101W	KRE5	P22023	1365 aa		11.82	□□□□□ -0.52
PCP1	YGR101W	RTC1	Q08281	1341 aa		11.81	□□□□□ -0.52
PCP1	YGR101W	BCK1	Q01389	1478 aa		11.8	□□□□□ -0.52
PCP1	YGR101W	PTP3	P40048	928 aa		11.78	□□□□□ -0.52
PCP1	YGR101W	RIA1	P53893	1110 aa		11.76	□□□□□ -0.53
PCP1	YGR101W	NUP192	P47054	1683 aa		11.75	□□□□□ -0.53
PCP1	YGR101W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.74	□□□□□ -0.53	not detected
PCP1	YGR101W	MRX12	P47084	519 aa		11.74	□□□□□ -0.53
PCP1	YGR101W	YNR029C	P53729	429 aa	Known RBP	11.74	□□□□□ -0.53
PCP1	YGR101W	GLN1	P32288	370 aa	Known RBP	11.73	□□□□□ -0.53
PCP1	YGR101W	PRY3	P47033	881 aa		11.72	□□□□□ -0.53
PCP1	YGR101W	APP1	P53933	587 aa		11.71	□□□□□ -0.53
PCP1	YGR101W	YIL055C	P40523	627 aa	Known RBP	11.69	□□□□□ -0.54
PCP1	YGR101W	TAF5	P38129	798 aa		11.67	□□□□□ -0.54
PCP1	YGR101W	ESL2	P36168	1195 aa		11.65	□□□□□ -0.54
PCP1	YGR101W	POL5	P39985	1022 aa	Known RBP	11.65	□□□□□ -0.54
PCP1	YGR101W	RAD9	P14737	1309 aa		11.63	□□□□□ -0.55
PCP1	YGR101W	ALD4	P46367	519 aa	Known RBP	11.61	□□□□□ -0.55
PCP1	YGR101W	CAB1	Q04430	367 aa		11.61	□□□□□ -0.55
PCP1	YGR101W	TY3B-I	Q7LHG5	1498 aa	Known RBP	11.61	□□□□□ -0.55
PCP1	YGR101W	REB1	P21538	810 aa		11.6	□□□□□ -0.55
PCP1	YGR101W	ORC1	P54784	914 aa	Predicted RBP	11.57	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms