RNA–Protein interactions for RNA: YGR077C

PEX8, Transcript of Intraperoxisomal organizer of the peroxisomal import machinery, yeastyeast

Gene PEX8, Length 1,770 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX8YGR077C RGA2Q06407 1009 aa5.5□□□□□ -1.53
PEX8YGR077C PTC4P38089 393 aa5.49□□□□□ -1.53
PEX8YGR077C DPS1P04802 557 aaKnown RBP5.48□□□□□ -1.53
PEX8YGR077C YEL023CP39992 682 aa5.47□□□□□ -1.53
PEX8YGR077C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
PEX8YGR077C ELP4Q02884 456 aaKnown RBP5.46□□□□□ -1.54
PEX8YGR077C YDR344CQ05510 147 aa5.43□□□□□ -1.54
PEX8YGR077C CST9Q06032 482 aa5.42□□□□□ -1.54
PEX8YGR077C PML39Q03760 334 aa5.39□□□□□ -1.55
PEX8YGR077C SSP1P38871 571 aa5.39□□□□□ -1.55
PEX8YGR077C RCR1P38212 213 aa5.37□□□□□ -1.55
PEX8YGR077C RGA1P39083 1007 aa5.37□□□□□ -1.55
PEX8YGR077C MGA2P40578 1113 aa5.35□□□□□ -1.55
PEX8YGR077C ARH1P48360 493 aa5.33□□□□□ -1.56
PEX8YGR077C SRC1Q03707 834 aa5.32□□□□□ -1.56
PEX8YGR077C GRE2Q12068 342 aaKnown RBP5.31□□□□□ -1.56
PEX8YGR077C SPT23P35210 1082 aa5.29□□□□□ -1.56
PEX8YGR077C MID1P41821 548 aa5.27□□□□□ -1.57
PEX8YGR077C PEX29Q03370 554 aa5.27□□□□□ -1.57
PEX8YGR077C ATH1P48016 1211 aa5.24□□□□□ -1.57
PEX8YGR077C GUT1P32190 709 aa5.21□□□□□ -1.58
PEX8YGR077C HAP5Q02516 242 aa5.21□□□□□ -1.58
PEX8YGR077C MIF2P35201 549 aa5.19□□□□□ -1.58
PEX8YGR077C PTC2P39966 464 aaKnown RBP5.19□□□□□ -1.58
PEX8YGR077C BNI4P53858 892 aa5.18□□□□□ -1.58
PEX8YGR077C YML082WQ04533 649 aaKnown RBP5.18□□□□□ -1.58
PEX8YGR077C NST1P53935 1240 aa5.17□□□□□ -1.58
PEX8YGR077C PTC3P34221 468 aaKnown RBP5.16□□□□□ -1.58
PEX8YGR077C RAS1P01119 309 aa5.16□□□□□ -1.58
PEX8YGR077C MPH3P0CE00 602 aa5.15□□□□□ -1.58
PEX8YGR077C EDS1P38073 919 aa5.14□□□□□ -1.59
PEX8YGR077C AI4P03878 556 aa5.13□□□□□ -1.59
PEX8YGR077C SOL3P38858 249 aa5.13□□□□□ -1.59
PEX8YGR077C ILV3P39522 585 aaKnown RBP5.1□□□□□ -1.59
PEX8YGR077C TRK1P12685 1235 aa5.09□□□□□ -1.59
PEX8YGR077C MPC54Q08550 464 aa5.09□□□□□ -1.59
PEX8YGR077C MAK11P20484 414 aaKnown RBP5.09□□□□□ -1.6
PEX8YGR077C NMA111P53920 997 aa5.07□□□□□ -1.6
PEX8YGR077C AMS1P22855 1083 aa5.04□□□□□ -1.6
PEX8YGR077C COQ8P27697 501 aa5.03□□□□□ -1.6
PEX8YGR077C RAM2P29703 316 aa5.02□□□□□ -1.61
PEX8YGR077C YPL062WQ02781 134 aa5.02□□□□□ -1.61
PEX8YGR077C GYP1Q08484 637 aa5.02□□□□□ -1.61
PEX8YGR077C YPR015CQ12531 247 aa5.02□□□□□ -1.61
PEX8YGR077C DPL1Q05567 589 aa5.01□□□□□ -1.61
PEX8YGR077C YGR273CP53329 174 aa5□□□□□ -1.61
PEX8YGR077C SLI15P38283 698 aa4.99□□□□□ -1.61
PEX8YGR077C RAM1P22007 431 aa4.97□□□□□ -1.61
PEX8YGR077C ISU2Q12056 156 aa4.96□□□□□ -1.62
PEX8YGR077C YEL077CQ3E7X8 1277 aa4.93□□□□□ -1.62
PEX8YGR077C SAS4Q04003 481 aa4.92□□□□□ -1.62
PEX8YGR077C SDH2P21801 266 aa4.91□□□□□ -1.62
PEX8YGR077C GBP2P25555 427 aaKnown RBP RIP-Chip data4.91□□□□□ -1.62not detected
PEX8YGR077C GAR1P28007 205 aaKnown RBP4.89□□□□□ -1.63
PEX8YGR077C NOP53Q12080 455 aaKnown RBP4.89□□□□□ -1.63
PEX8YGR077C PDR1P12383 1068 aa4.88□□□□□ -1.63
PEX8YGR077C CDC73Q06697 393 aa4.87□□□□□ -1.63
PEX8YGR077C BRE2P43132 505 aa4.86□□□□□ -1.63
PEX8YGR077C MRF1P30775 413 aaPredicted RBP4.85□□□□□ -1.63
PEX8YGR077C KEX1P09620 729 aa4.84□□□□□ -1.63
PEX8YGR077C GCR2Q01722 534 aa4.84□□□□□ -1.63
PEX8YGR077C ERG12P07277 443 aa4.78□□□□□ -1.64
PEX8YGR077C AIR1P40507 360 aaKnown RBP4.78□□□□□ -1.64
PEX8YGR077C PRT1P06103 763 aaKnown RBP4.76□□□□□ -1.65
PEX8YGR077C BUD20Q08004 166 aaPredicted RBP4.76□□□□□ -1.65
PEX8YGR077C CLA4P48562 842 aa4.76□□□□□ -1.65
PEX8YGR077C RPP1BP10622 106 aaKnown RBP4.75□□□□□ -1.65
PEX8YGR077C YLR326WQ06170 240 aaKnown RBP4.73□□□□□ -1.65
PEX8YGR077C CST6P40535 587 aa4.73□□□□□ -1.65
PEX8YGR077C MET22P32179 357 aa4.71□□□□□ -1.66
PEX8YGR077C VHR2P40041 505 aa4.71□□□□□ -1.66
PEX8YGR077C YRR1Q12172 810 aa4.71□□□□□ -1.66
PEX8YGR077C RAD54P32863 898 aa4.7□□□□□ -1.66
PEX8YGR077C UBP14P38237 781 aaKnown RBP4.7□□□□□ -1.66
PEX8YGR077C PCS60P38137 543 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66 RIP-Chip
PEX8YGR077C PEX21P50091 288 aa4.69□□□□□ -1.66
PEX8YGR077C ENV9Q08651 330 aa4.69□□□□□ -1.66
PEX8YGR077C CDC4P07834 779 aa4.68□□□□□ -1.66
PEX8YGR077C STR2P47164 639 aa4.68□□□□□ -1.66
PEX8YGR077C ISM1P48526 1002 aa4.68□□□□□ -1.66
PEX8YGR077C LAM6Q08001 693 aa4.68□□□□□ -1.66
PEX8YGR077C FRK1Q03002 865 aaPredicted RBP4.66□□□□□ -1.66
PEX8YGR077C SPT16P32558 1035 aaKnown RBP4.65□□□□□ -1.66
PEX8YGR077C NUD1P32336 851 aa4.64□□□□□ -1.67
PEX8YGR077C NPL4P33755 580 aa4.64□□□□□ -1.67
PEX8YGR077C YDR444WQ04093 687 aa4.64□□□□□ -1.67
PEX8YGR077C GCD11P32481 527 aaKnown RBP4.63□□□□□ -1.67
PEX8YGR077C TFB4Q12004 338 aa4.61□□□□□ -1.67
PEX8YGR077C TUM1Q08686 304 aaKnown RBP4.6□□□□□ -1.67
PEX8YGR077C BDP1P46678 594 aa4.6□□□□□ -1.67
PEX8YGR077C KIC1P38692 1080 aa4.59□□□□□ -1.67
PEX8YGR077C CSC1Q06538 782 aa4.59□□□□□ -1.67
PEX8YGR077C TY1A-DR4O74302 440 aa4.58□□□□□ -1.68
PEX8YGR077C TY1A-HP0C2I4 478 aaKnown RBP4.58□□□□□ -1.68
PEX8YGR077C TY1A-AP0CX57 440 aa4.58□□□□□ -1.68
PEX8YGR077C TY1A-PR1P0CX58 440 aa4.58□□□□□ -1.68
PEX8YGR077C TY1A-ORP0CX59 440 aa4.58□□□□□ -1.68
PEX8YGR077C TY1A-PR2P0CX60 440 aa4.58□□□□□ -1.68
PEX8YGR077C TY1A-DR5P0CX65 440 aa4.58□□□□□ -1.68
PEX8YGR077C TY1A-ER2P0CX66 440 aa4.58□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms