RNA–Protein interactions for RNA: YGL184C

STR3, Transcript of Peroxisomal cystathionine beta-lyase, yeast

Gene STR3, Length 1,398 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STR3	YGL184C	TY1B-MR2	Q04670	1755 aa	Known RBP	14.77	□□□□□ -0.05
STR3	YGL184C	TY1B-LR1	Q12088	1755 aa	Known RBP	14.77	□□□□□ -0.05
STR3	YGL184C	TY1B-NL1	Q12112	1755 aa		14.77	□□□□□ -0.05
STR3	YGL184C	TY1B-GR1	Q12141	1755 aa		14.77	□□□□□ -0.05
STR3	YGL184C	TY1B-BL	Q12490	1755 aa		14.77	□□□□□ -0.05
STR3	YGL184C	DNF1	P32660	1571 aa		14.76	□□□□□ -0.05
STR3	YGL184C	RTT106	P40161	455 aa		14.74	□□□□□ -0.05
STR3	YGL184C	NUP170	P38181	1502 aa		14.73	□□□□□ -0.05
STR3	YGL184C	RPA190	P10964	1664 aa	Known RBP	14.69	□□□□□ -0.06
STR3	YGL184C	TY3B-G	Q99315	1547 aa		14.68	□□□□□ -0.06
STR3	YGL184C	GEA2	P39993	1459 aa	Known RBP	14.64	□□□□□ -0.07
STR3	YGL184C	VPS15	P22219	1454 aa		14.6	□□□□□ -0.07
STR3	YGL184C	NUP159	P40477	1460 aa		14.59	□□□□□ -0.07
STR3	YGL184C	RPO21	P04050	1733 aa	Known RBP	14.58	□□□□□ -0.08
STR3	YGL184C	NTE1	Q04958	1679 aa		14.58	□□□□□ -0.08
STR3	YGL184C	IRC20	Q06554	1556 aa		14.57	□□□□□ -0.08
STR3	YGL184C	CAT8	P39113	1433 aa		14.56	□□□□□ -0.08
STR3	YGL184C	MET10	P39692	1035 aa		14.54	□□□□□ -0.08
STR3	YGL184C	YBT1	P32386	1661 aa		14.5	□□□□□ -0.09
STR3	YGL184C	CKB1	P43639	278 aa		14.46	□□□□□ -0.1
STR3	YGL184C	MET5	P47169	1442 aa		14.44	□□□□□ -0.1
STR3	YGL184C	GDB1	Q06625	1536 aa		14.44	□□□□□ -0.1
STR3	YGL184C	NUP157	P40064	1391 aa	Known RBP	14.42	□□□□□ -0.1
STR3	YGL184C	PDR12	Q02785	1511 aa		14.41	□□□□□ -0.1
STR3	YGL184C	SRB8	P25648	1427 aa		14.41	□□□□□ -0.1
STR3	YGL184C	PDR10	P51533	1564 aa		14.41	□□□□□ -0.1
STR3	YGL184C	YRF1-1	P0CX20	1796 aa		14.39	□□□□□ -0.11
STR3	YGL184C	YRF1-5	P0CX21	1796 aa		14.39	□□□□□ -0.11
STR3	YGL184C	YRF1-8	P0CX22	1796 aa		14.39	□□□□□ -0.11
STR3	YGL184C	SPO14	P36126	1683 aa		14.36	□□□□□ -0.11
STR3	YGL184C	ARO1	P08566	1588 aa	Known RBP	14.36	□□□□□ -0.11
STR3	YGL184C	BUD21	Q08492	214 aa	Predicted RBP	14.29	□□□□□ -0.12
STR3	YGL184C	YSP2	Q06681	1438 aa		14.28	□□□□□ -0.12
STR3	YGL184C	BUD3	P25558	1636 aa		14.26	□□□□□ -0.13
STR3	YGL184C	MMS1	Q06211	1407 aa		14.21	□□□□□ -0.13
STR3	YGL184C	IQG1	Q12280	1495 aa		14.19	□□□□□ -0.14
STR3	YGL184C	POL5	P39985	1022 aa	Known RBP	14.15	□□□□□ -0.14
STR3	YGL184C	GCN2	P15442	1659 aa		14.12	□□□□□ -0.15
STR3	YGL184C	BNR1	P40450	1375 aa		14.12	□□□□□ -0.15
STR3	YGL184C	NOP7	P53261	605 aa	Known RBP	14.09	□□□□□ -0.15
STR3	YGL184C	LTE1	P07866	1435 aa		14.06	□□□□□ -0.16
STR3	YGL184C	SEC7	P11075	2009 aa	Known RBP	14.05	□□□□□ -0.16
STR3	YGL184C	PAF1	P38351	445 aa		14.02	□□□□□ -0.17
STR3	YGL184C	BFR2	Q06631	534 aa	Known RBP	13.97	□□□□□ -0.17
STR3	YGL184C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	13.96	□□□□□ -0.18	not detected
STR3	YGL184C	DRS2	P39524	1355 aa		13.96	□□□□□ -0.18
STR3	YGL184C	TRM3	Q07527	1436 aa		13.91	□□□□□ -0.18
STR3	YGL184C	YOR093C	Q12275	1648 aa		13.9	□□□□□ -0.18
STR3	YGL184C	ITT1	Q04638	464 aa		13.89	□□□□□ -0.19
STR3	YGL184C	PDR5	P33302	1511 aa	Known RBP	13.88	□□□□□ -0.19
STR3	YGL184C	PDR11	P40550	1411 aa		13.87	□□□□□ -0.19
STR3	YGL184C	ORC1	P54784	914 aa	Predicted RBP	13.86	□□□□□ -0.19
STR3	YGL184C	CHC1	P22137	1653 aa	Known RBP	13.86	□□□□□ -0.19
STR3	YGL184C	DOP1	Q03921	1698 aa		13.86	□□□□□ -0.19
STR3	YGL184C	RAV1	P47104	1357 aa		13.85	□□□□□ -0.19
STR3	YGL184C	RTC1	Q08281	1341 aa		13.84	□□□□□ -0.19
STR3	YGL184C	SPT7	P35177	1332 aa		13.82	□□□□□ -0.2
STR3	YGL184C	SEC3	P33332	1336 aa	Known RBP	13.8	□□□□□ -0.2
STR3	YGL184C	VMR1	P38735	1592 aa		13.79	□□□□□ -0.2
STR3	YGL184C	ENP1	P38333	483 aa	Known RBP	13.79	□□□□□ -0.2
STR3	YGL184C	TAF5	P38129	798 aa		13.77	□□□□□ -0.21
STR3	YGL184C	BNI1	P41832	1953 aa		13.76	□□□□□ -0.21
STR3	YGL184C	NUP188	P52593	1655 aa	Known RBP	13.76	□□□□□ -0.21
STR3	YGL184C	IML1	P47170	1584 aa		13.74	□□□□□ -0.21
STR3	YGL184C	TYS1	P36421	394 aa	Known RBP	13.72	□□□□□ -0.21
STR3	YGL184C	IPL1	P38991	367 aa		13.71	□□□□□ -0.21
STR3	YGL184C	MHP1	P43638	1398 aa		13.71	□□□□□ -0.21
STR3	YGL184C	URN1	Q06525	465 aa	Known RBP	13.71	□□□□□ -0.21
STR3	YGL184C	TY3B-I	Q7LHG5	1498 aa	Known RBP	13.71	□□□□□ -0.22
STR3	YGL184C	ESL2	P36168	1195 aa		13.71	□□□□□ -0.22
STR3	YGL184C	DNF2	Q12675	1612 aa		13.69	□□□□□ -0.22
STR3	YGL184C	KIP3	P53086	805 aa	Known RBP	13.67	□□□□□ -0.22
STR3	YGL184C	PSD2	P53037	1138 aa	Known RBP	13.65	□□□□□ -0.22
STR3	YGL184C	LEU3	P08638	886 aa		13.63	□□□□□ -0.23
STR3	YGL184C	YAP3	P38749	330 aa		13.61	□□□□□ -0.23
STR3	YGL184C	PDS5	Q04264	1277 aa		13.6	□□□□□ -0.23
STR3	YGL184C	NUP192	P47054	1683 aa		13.59	□□□□□ -0.23
STR3	YGL184C	YLR419W	Q06698	1435 aa	Known RBP	13.59	□□□□□ -0.23
STR3	YGL184C	SPE2	P21182	396 aa		13.56	□□□□□ -0.24
STR3	YGL184C	ALD4	P46367	519 aa	Known RBP	13.55	□□□□□ -0.24
STR3	YGL184C	RAD9	P14737	1309 aa		13.53	□□□□□ -0.24
STR3	YGL184C	TAF8	Q03750	510 aa		13.52	□□□□□ -0.25
STR3	YGL184C	SCT1	P32784	759 aa		13.5	□□□□□ -0.25
STR3	YGL184C	NOP2	P40991	618 aa	Known RBP	13.5	□□□□□ -0.25
STR3	YGL184C	PRS1	P32895	427 aa	Known RBP	13.47	□□□□□ -0.25
STR3	YGL184C	NST1	P53935	1240 aa		13.47	□□□□□ -0.25
STR3	YGL184C	CAB1	Q04430	367 aa		13.47	□□□□□ -0.25
STR3	YGL184C	BCK1	Q01389	1478 aa		13.45	□□□□□ -0.26
STR3	YGL184C	CHZ1	P40019	153 aa	Predicted RBP	13.44	□□□□□ -0.26
STR3	YGL184C	RTG3	P38165	486 aa		13.41	□□□□□ -0.26
STR3	YGL184C	NAP1	P25293	417 aa	Known RBP	13.4	□□□□□ -0.26
STR3	YGL184C	HAP1	P0CE41	1502 aa		13.37	□□□□□ -0.27
STR3	YGL184C	FKH1	P40466	484 aa		13.36	□□□□□ -0.27
STR3	YGL184C	MRX12	P47084	519 aa		13.36	□□□□□ -0.27
STR3	YGL184C	KRE5	P22023	1365 aa		13.34	□□□□□ -0.27
STR3	YGL184C	RIA1	P53893	1110 aa		13.31	□□□□□ -0.28
STR3	YGL184C	MAK10	Q02197	733 aa		13.31	□□□□□ -0.28
STR3	YGL184C	DNF3	Q12674	1656 aa		13.28	□□□□□ -0.28
STR3	YGL184C	ABP1	P15891	592 aa	Known RBP	13.27	□□□□□ -0.29
STR3	YGL184C	YEF3	P16521	1044 aa	Known RBP	13.24	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms