RNA–Protein interactions for RNA: YFR022W

ROG3, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROG3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROG3YFR022W MSH3P25336 1018 aa6.62□□□□□ -1.35
ROG3YFR022W CTR9P89105 1077 aa6.61□□□□□ -1.35
ROG3YFR022W HIF1Q12373 385 aa6.6□□□□□ -1.35
ROG3YFR022W SWE1P32944 819 aa6.6□□□□□ -1.35
ROG3YFR022W BYE1P36106 594 aa6.58□□□□□ -1.36
ROG3YFR022W SIC1P38634 284 aa6.58□□□□□ -1.36
ROG3YFR022W TIF4632P39936 914 aaKnown RBP6.58□□□□□ -1.36
ROG3YFR022W DSN1P40568 576 aa6.58□□□□□ -1.36
ROG3YFR022W TOA1P32773 286 aa6.58□□□□□ -1.36
ROG3YFR022W TLG1Q03322 224 aa6.58□□□□□ -1.36
ROG3YFR022W RPN7Q06103 429 aaKnown RBP6.58□□□□□ -1.36
ROG3YFR022W MON2P48563 1636 aaPredicted RBP6.57□□□□□ -1.36
ROG3YFR022W MMS1Q06211 1407 aa6.57□□□□□ -1.36
ROG3YFR022W ECM16Q04217 1267 aaKnown RBP6.56□□□□□ -1.36
ROG3YFR022W NOP8Q08287 484 aaPredicted RBP6.56□□□□□ -1.36
ROG3YFR022W YPP1P46951 817 aa6.56□□□□□ -1.36
ROG3YFR022W PET111P08468 800 aa6.55□□□□□ -1.36
ROG3YFR022W SLN1P39928 1220 aaPredicted RBP6.55□□□□□ -1.36
ROG3YFR022W NHA1Q99271 985 aa6.55□□□□□ -1.36
ROG3YFR022W IKI3Q06706 1349 aaKnown RBP6.55□□□□□ -1.36
ROG3YFR022W PEP1P32319 1579 aa6.54□□□□□ -1.36
ROG3YFR022W BUD4P47136 1447 aa6.54□□□□□ -1.36
ROG3YFR022W SRB8P25648 1427 aa6.53□□□□□ -1.36
ROG3YFR022W CLB5P30283 435 aa6.53□□□□□ -1.36
ROG3YFR022W SUB1P54000 292 aaKnown RBP6.53□□□□□ -1.36
ROG3YFR022W NOT3P06102 836 aaKnown RBP6.52□□□□□ -1.37
ROG3YFR022W SSA1P10591 642 aaKnown RBP6.52□□□□□ -1.37
ROG3YFR022W SSA2P10592 639 aaKnown RBP6.52□□□□□ -1.37
ROG3YFR022W TRM732Q03496 1420 aa6.52□□□□□ -1.37
ROG3YFR022W RRP14P36080 434 aaKnown RBP6.52□□□□□ -1.37
ROG3YFR022W SRP54P20424 541 aaKnown RBP6.51□□□□□ -1.37
ROG3YFR022W MYO4P32492 1471 aa6.51□□□□□ -1.37
ROG3YFR022W LEU3P08638 886 aa6.5□□□□□ -1.37
ROG3YFR022W SPT16P32558 1035 aaKnown RBP6.5□□□□□ -1.37
ROG3YFR022W SAP190P36123 1033 aa6.5□□□□□ -1.37
ROG3YFR022W CHZ1P40019 153 aaPredicted RBP6.5□□□□□ -1.37
ROG3YFR022W YIR014WP40570 242 aa6.5□□□□□ -1.37
ROG3YFR022W GIN4Q12263 1142 aa6.5□□□□□ -1.37
ROG3YFR022W APL5Q08951 932 aaKnown RBP6.49□□□□□ -1.37
ROG3YFR022W EDE1P34216 1381 aa6.49□□□□□ -1.37
ROG3YFR022W RRP15Q06511 250 aaPredicted RBP6.48□□□□□ -1.37
ROG3YFR022W SWI3P32591 825 aa6.48□□□□□ -1.37
ROG3YFR022W MED8P38304 223 aa6.48□□□□□ -1.37
ROG3YFR022W YMR124WP39523 943 aaKnown RBP6.48□□□□□ -1.37
ROG3YFR022W YVC1Q12324 675 aa6.48□□□□□ -1.37
ROG3YFR022W CDC11P32458 415 aa6.47□□□□□ -1.37
ROG3YFR022W YLR419WQ06698 1435 aaKnown RBP6.47□□□□□ -1.37
ROG3YFR022W CLB1P24868 471 aa6.46□□□□□ -1.37
ROG3YFR022W DEP1P31385 405 aa6.46□□□□□ -1.37
ROG3YFR022W DJP1P40564 432 aa6.46□□□□□ -1.37
ROG3YFR022W BMS1Q08965 1183 aaKnown RBP6.46□□□□□ -1.37
ROG3YFR022W RAD51P25454 400 aa6.46□□□□□ -1.38
ROG3YFR022W ECM1P39715 212 aa6.46□□□□□ -1.38
ROG3YFR022W PAP2P53632 584 aaKnown RBP6.46□□□□□ -1.38
ROG3YFR022W ORC1P54784 914 aaPredicted RBP6.46□□□□□ -1.38
ROG3YFR022W YLL054CQ12244 843 aa6.46□□□□□ -1.38
ROG3YFR022W HSC82P15108 705 aaKnown RBP6.45□□□□□ -1.38
ROG3YFR022W NAB3P38996 802 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
ROG3YFR022W PEA2P40091 420 aa6.45□□□□□ -1.38
ROG3YFR022W TPM2P40414 161 aa6.45□□□□□ -1.38
ROG3YFR022W RNT1Q02555 471 aa6.45□□□□□ -1.38
ROG3YFR022W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
ROG3YFR022W ABP1P15891 592 aaKnown RBP6.45□□□□□ -1.38
ROG3YFR022W RSC8P43609 557 aaKnown RBP6.45□□□□□ -1.38
ROG3YFR022W SMC4Q12267 1418 aa6.44□□□□□ -1.38
ROG3YFR022W TCD1P38756 429 aa6.44□□□□□ -1.38
ROG3YFR022W MPP10P47083 593 aaKnown RBP6.44□□□□□ -1.38
ROG3YFR022W ERV41Q04651 352 aa6.44□□□□□ -1.38
ROG3YFR022W PDR10P51533 1564 aa6.44□□□□□ -1.38
ROG3YFR022W RTT106P40161 455 aa6.44□□□□□ -1.38
ROG3YFR022W VPS60Q03390 229 aa6.44□□□□□ -1.38
ROG3YFR022W VPS24P36095 224 aaKnown RBP6.43□□□□□ -1.38
ROG3YFR022W VPS30Q02948 557 aa6.43□□□□□ -1.38
ROG3YFR022W YPK9Q12697 1472 aa6.43□□□□□ -1.38
ROG3YFR022W ALD3P54114 506 aa6.42□□□□□ -1.38
ROG3YFR022W MDM38Q08179 573 aa6.42□□□□□ -1.38
ROG3YFR022W THO2P53552 1597 aaKnown RBP6.42□□□□□ -1.38
ROG3YFR022W RPC82P32349 654 aa6.42□□□□□ -1.38
ROG3YFR022W ARL1P38116 183 aaKnown RBP6.42□□□□□ -1.38
ROG3YFR022W VID30P53076 958 aa6.42□□□□□ -1.38
ROG3YFR022W MSP1P28737 362 aa6.41□□□□□ -1.38
ROG3YFR022W ESC2Q06340 456 aa6.41□□□□□ -1.38
ROG3YFR022W RAD2P07276 1031 aa6.41□□□□□ -1.38
ROG3YFR022W PCT1P13259 424 aa6.41□□□□□ -1.38
ROG3YFR022W CIN4P39110 191 aa6.41□□□□□ -1.38
ROG3YFR022W SEC9P40357 651 aa6.41□□□□□ -1.38
ROG3YFR022W VPS72Q03388 795 aa6.41□□□□□ -1.38
ROG3YFR022W TY1B-AO13527 1196 aaKnown RBP6.4□□□□□ -1.38
ROG3YFR022W KAR3P17119 729 aa6.4□□□□□ -1.38
ROG3YFR022W SUP35P05453 685 aaKnown RBP6.4□□□□□ -1.39
ROG3YFR022W MCM1P11746 286 aa6.4□□□□□ -1.39
ROG3YFR022W ZUO1P32527 433 aaKnown RBP6.4□□□□□ -1.39
ROG3YFR022W LEM3P42838 414 aa6.4□□□□□ -1.39
ROG3YFR022W ITC1P53125 1264 aa6.4□□□□□ -1.39
ROG3YFR022W NOP14Q99207 810 aaKnown RBP6.4□□□□□ -1.39
ROG3YFR022W PSD2P53037 1138 aaKnown RBP6.39□□□□□ -1.39
ROG3YFR022W RSC1P53236 928 aa6.39□□□□□ -1.39
ROG3YFR022W KNS1P32350 737 aaPredicted RBP6.38□□□□□ -1.39
ROG3YFR022W HOS4P40480 1083 aa6.38□□□□□ -1.39
ROG3YFR022W IRC20Q06554 1556 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms