RNA–Protein interactions for RNA: YFR021W

ATG18, Transcript of Phosphoinositide binding protein, yeastyeast

Gene ATG18, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG18YFR021W MIF2P35201 549 aa8.84□□□□□ -0.99
ATG18YFR021W COX6P00427 148 aa8.83□□□□□ -1
ATG18YFR021W YML020WQ03722 664 aa8.81□□□□□ -1
ATG18YFR021W TFB3Q03290 321 aa8.8□□□□□ -1
ATG18YFR021W MST1P07236 462 aa8.8□□□□□ -1
ATG18YFR021W NOP8Q08287 484 aaPredicted RBP8.77□□□□□ -1.01
ATG18YFR021W VMA1P17255 1071 aaKnown RBP8.76□□□□□ -1.01
ATG18YFR021W SSA1P10591 642 aaKnown RBP8.75□□□□□ -1.01
ATG18YFR021W GEF1P37020 779 aa8.74□□□□□ -1.01
ATG18YFR021W BRL1P38770 471 aa8.74□□□□□ -1.01
ATG18YFR021W PTC3P34221 468 aaKnown RBP8.72□□□□□ -1.01
ATG18YFR021W SUB2Q07478 446 aaKnown RBP8.72□□□□□ -1.01
ATG18YFR021W GTT3P39996 337 aa8.7□□□□□ -1.02
ATG18YFR021W SLX8P40072 274 aa8.7□□□□□ -1.02
ATG18YFR021W PKC1P24583 1151 aa8.7□□□□□ -1.02
ATG18YFR021W SSA2P10592 639 aaKnown RBP8.68□□□□□ -1.02
ATG18YFR021W YDR090CQ03193 310 aa8.67□□□□□ -1.02
ATG18YFR021W SAM3Q08986 587 aa8.66□□□□□ -1.02
ATG18YFR021W AIM44Q99299 758 aa8.65□□□□□ -1.02
ATG18YFR021W VHR2P40041 505 aa8.64□□□□□ -1.03
ATG18YFR021W BIM1P40013 344 aa8.64□□□□□ -1.03
ATG18YFR021W GLN1P32288 370 aaKnown RBP8.63□□□□□ -1.03
ATG18YFR021W UBP14P38237 781 aaKnown RBP8.63□□□□□ -1.03
ATG18YFR021W CSN12P47130 423 aa8.63□□□□□ -1.03
ATG18YFR021W GRE2Q12068 342 aaKnown RBP8.63□□□□□ -1.03
ATG18YFR021W YJL007CP47080 104 aa8.61□□□□□ -1.03
ATG18YFR021W ATH1P48016 1211 aa8.61□□□□□ -1.03
ATG18YFR021W PSE1P32337 1089 aaKnown RBP8.6□□□□□ -1.03
ATG18YFR021W ATG32P40458 529 aa8.6□□□□□ -1.03
ATG18YFR021W YLR326WQ06170 240 aaKnown RBP8.59□□□□□ -1.03
ATG18YFR021W GYP5Q12344 894 aa8.59□□□□□ -1.03
ATG18YFR021W SSA4P22202 642 aaKnown RBP8.59□□□□□ -1.03
ATG18YFR021W YOL036WQ08206 761 aa8.59□□□□□ -1.03
ATG18YFR021W GUT1P32190 709 aa8.58□□□□□ -1.04
ATG18YFR021W ORC1P54784 914 aaPredicted RBP8.57□□□□□ -1.04
ATG18YFR021W KIC1P38692 1080 aa8.56□□□□□ -1.04
ATG18YFR021W SET4P42948 560 aa8.55□□□□□ -1.04
ATG18YFR021W WSC3Q12215 556 aa8.55□□□□□ -1.04
ATG18YFR021W KTR1P27810 393 aaKnown RBP8.53□□□□□ -1.04
ATG18YFR021W RPL34BP40525 121 aaKnown RBP8.53□□□□□ -1.04
ATG18YFR021W MSB4Q12317 492 aa8.53□□□□□ -1.04
ATG18YFR021W TIF1P10081 395 aaKnown RBP8.52□□□□□ -1.05
ATG18YFR021W RAD54P32863 898 aa8.51□□□□□ -1.05
ATG18YFR021W DCW1P36091 449 aa8.51□□□□□ -1.05
ATG18YFR021W YBL029C-AQ3E756 94 aa8.51□□□□□ -1.05
ATG18YFR021W ERG12P07277 443 aa8.5□□□□□ -1.05
ATG18YFR021W YGR273CP53329 174 aa8.49□□□□□ -1.05
ATG18YFR021W PCS60P38137 543 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
ATG18YFR021W MRX12P47084 519 aa8.49□□□□□ -1.05
ATG18YFR021W TEA1P47988 759 aa8.49□□□□□ -1.05
ATG18YFR021W CPS1P27614 576 aa8.48□□□□□ -1.05
ATG18YFR021W HTA1P04911 132 aaKnown RBP8.47□□□□□ -1.05
ATG18YFR021W HTA2P04912 132 aa8.47□□□□□ -1.05
ATG18YFR021W YBL036CP38197 257 aa8.47□□□□□ -1.05
ATG18YFR021W ORC6P38826 435 aa8.47□□□□□ -1.05
ATG18YFR021W SOL3P38858 249 aa8.47□□□□□ -1.05
ATG18YFR021W UBP9P39967 754 aa8.47□□□□□ -1.05
ATG18YFR021W KEX1P09620 729 aa8.46□□□□□ -1.05
ATG18YFR021W BIO2P32451 375 aa8.46□□□□□ -1.05
ATG18YFR021W TTI1P36097 1038 aa8.46□□□□□ -1.05
ATG18YFR021W VNX1P42839 908 aa8.46□□□□□ -1.05
ATG18YFR021W SLD2P34252 453 aa8.45□□□□□ -1.06
ATG18YFR021W TYW1Q08960 810 aaKnown RBP8.45□□□□□ -1.06
ATG18YFR021W YPR204WQ08995 1032 aa8.44□□□□□ -1.06
ATG18YFR021W EAP1P36041 632 aaKnown RBP8.44□□□□□ -1.06
ATG18YFR021W NOP7P53261 605 aaKnown RBP8.44□□□□□ -1.06
ATG18YFR021W NST1P53935 1240 aa8.44□□□□□ -1.06
ATG18YFR021W RPL34AP87262 121 aaPredicted RBP8.44□□□□□ -1.06
ATG18YFR021W CDC3P32457 520 aaKnown RBP8.42□□□□□ -1.06
ATG18YFR021W NOB1Q08444 459 aaKnown RBP8.42□□□□□ -1.06
ATG18YFR021W RTG2P32608 588 aaKnown RBP8.41□□□□□ -1.06
ATG18YFR021W TRP5P00931 707 aaKnown RBP8.39□□□□□ -1.07
ATG18YFR021W CLB5P30283 435 aa8.39□□□□□ -1.07
ATG18YFR021W TIF11P38912 153 aaKnown RBP8.39□□□□□ -1.07
ATG18YFR021W SPP1Q03012 353 aa8.39□□□□□ -1.07
ATG18YFR021W RGR1P19263 1082 aa8.39□□□□□ -1.07
ATG18YFR021W NAP1P25293 417 aaKnown RBP8.39□□□□□ -1.07
ATG18YFR021W YEL023CP39992 682 aa8.39□□□□□ -1.07
ATG18YFR021W CSE4P36012 229 aa8.38□□□□□ -1.07
ATG18YFR021W SSF1P38789 453 aaPredicted RBP8.38□□□□□ -1.07
ATG18YFR021W ULI1P43604 169 aa8.38□□□□□ -1.07
ATG18YFR021W SNU71P53207 620 aaKnown RBP8.38□□□□□ -1.07
ATG18YFR021W HST2P53686 357 aa8.38□□□□□ -1.07
ATG18YFR021W YNL108CP53929 270 aa8.37□□□□□ -1.07
ATG18YFR021W RAD59Q12223 238 aa8.37□□□□□ -1.07
ATG18YFR021W AI4P03878 556 aa8.36□□□□□ -1.07
ATG18YFR021W MPH3P0CE00 602 aa8.36□□□□□ -1.07
ATG18YFR021W ILV3P39522 585 aaKnown RBP8.35□□□□□ -1.07
ATG18YFR021W NIS1P53939 407 aa8.35□□□□□ -1.07
ATG18YFR021W SIS1P25294 352 aaKnown RBP8.34□□□□□ -1.07
ATG18YFR021W FPK1P53739 893 aa8.34□□□□□ -1.07
ATG18YFR021W SEN54Q02825 467 aaPredicted RBP8.34□□□□□ -1.07
ATG18YFR021W PKH3Q03306 898 aaPredicted RBP8.34□□□□□ -1.07
ATG18YFR021W SUP45P12385 437 aaKnown RBP8.34□□□□□ -1.08
ATG18YFR021W YMR196WQ04336 1088 aa8.34□□□□□ -1.08
ATG18YFR021W PTC4P38089 393 aa8.33□□□□□ -1.08
ATG18YFR021W MVP1P40959 511 aaKnown RBP8.33□□□□□ -1.08
ATG18YFR021W PUP1P25043 261 aa8.32□□□□□ -1.08
ATG18YFR021W YML083CQ04526 418 aa8.32□□□□□ -1.08
ATG18YFR021W IOC2Q12072 812 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms