RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	HGH1	P48362	394 aa	Known RBP	5.45	□□□□□ -1.54
SPI1	YER150W	SLX8	P40072	274 aa		5.44	□□□□□ -1.54
SPI1	YER150W	SPB4	P25808	606 aa	Predicted RBP	5.43	□□□□□ -1.54
SPI1	YER150W	SEC61	P32915	480 aa		5.43	□□□□□ -1.54
SPI1	YER150W	YNL035C	P53962	389 aa	Known RBP	5.43	□□□□□ -1.54
SPI1	YER150W	DBP1	P24784	617 aa	Known RBP	5.4	□□□□□ -1.54
SPI1	YER150W	MNN4	P36044	1178 aa		5.39	□□□□□ -1.55
SPI1	YER150W	YFR006W	P43590	535 aa		5.39	□□□□□ -1.55
SPI1	YER150W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
SPI1	YER150W	SUB1	P54000	292 aa	Known RBP	5.39	□□□□□ -1.55
SPI1	YER150W	NUG1	P40010	520 aa	Known RBP	5.38	□□□□□ -1.55
SPI1	YER150W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.38	□□□□□ -1.55	not detected
SPI1	YER150W	VPS29	P38759	282 aa		5.37	□□□□□ -1.55
SPI1	YER150W	TFG1	P41895	735 aa	Predicted RBP	5.37	□□□□□ -1.55
SPI1	YER150W	SSA1	P10591	642 aa	Known RBP	5.36	□□□□□ -1.55
SPI1	YER150W	VMA1	P17255	1071 aa	Known RBP	5.36	□□□□□ -1.55
SPI1	YER150W	ASF1	P32447	279 aa		5.36	□□□□□ -1.55
SPI1	YER150W	GEF1	P37020	779 aa		5.36	□□□□□ -1.55
SPI1	YER150W	SAP30	P38429	201 aa		5.36	□□□□□ -1.55
SPI1	YER150W	VPS72	Q03388	795 aa		5.36	□□□□□ -1.55
SPI1	YER150W	SWE1	P32944	819 aa		5.35	□□□□□ -1.55
SPI1	YER150W	BRN1	P38170	754 aa		5.35	□□□□□ -1.55
SPI1	YER150W	KIN1	P13185	1064 aa		5.34	□□□□□ -1.55
SPI1	YER150W	BCK2	P33306	851 aa		5.34	□□□□□ -1.55
SPI1	YER150W	MET10	P39692	1035 aa		5.34	□□□□□ -1.55
SPI1	YER150W	SAM3	Q08986	587 aa		5.34	□□□□□ -1.55
SPI1	YER150W	STS1	P38637	319 aa		5.33	□□□□□ -1.56
SPI1	YER150W	KRI1	P42846	591 aa	Known RBP	5.33	□□□□□ -1.56
SPI1	YER150W	GIN4	Q12263	1142 aa		5.33	□□□□□ -1.56
SPI1	YER150W	YFR016C	P43597	1233 aa	Known RBP	5.32	□□□□□ -1.56
SPI1	YER150W	DAN4	P47179	1161 aa		5.32	□□□□□ -1.56
SPI1	YER150W	RTS3	P53289	263 aa		5.32	□□□□□ -1.56
SPI1	YER150W	SLD2	P34252	453 aa		5.31	□□□□□ -1.56
SPI1	YER150W	RTG3	P38165	486 aa		5.31	□□□□□ -1.56
SPI1	YER150W	ATG36	P46983	293 aa		5.31	□□□□□ -1.56
SPI1	YER150W	MRX12	P47084	519 aa		5.31	□□□□□ -1.56
SPI1	YER150W	MDG1	P53885	366 aa		5.31	□□□□□ -1.56
SPI1	YER150W	DOS2	P54858	310 aa		5.31	□□□□□ -1.56
SPI1	YER150W	CHL1	P22516	861 aa	Predicted RBP	5.3	□□□□□ -1.56
SPI1	YER150W	SIS2	P36024	562 aa		5.3	□□□□□ -1.56
SPI1	YER150W	FAR11	P53917	953 aa		5.3	□□□□□ -1.56
SPI1	YER150W	YTA7	P40340	1379 aa		5.29	□□□□□ -1.56
SPI1	YER150W	JIP4	Q03361	876 aa		5.29	□□□□□ -1.56
SPI1	YER150W	CST9	Q06032	482 aa		5.29	□□□□□ -1.56
SPI1	YER150W	YDL129W	Q07555	291 aa		5.29	□□□□□ -1.56
SPI1	YER150W	SPC42	P36094	363 aa		5.28	□□□□□ -1.56
SPI1	YER150W	PAM1	P37304	830 aa	Known RBP	5.28	□□□□□ -1.56
SPI1	YER150W	OSW7	P43611	510 aa		5.28	□□□□□ -1.56
SPI1	YER150W	YNR021W	P53723	404 aa	Known RBP	5.28	□□□□□ -1.56
SPI1	YER150W	PRE3	P38624	215 aa		5.27	□□□□□ -1.57
SPI1	YER150W	SUB2	Q07478	446 aa	Known RBP	5.27	□□□□□ -1.57
SPI1	YER150W	LAM6	Q08001	693 aa		5.27	□□□□□ -1.57
SPI1	YER150W	MGA2	P40578	1113 aa		5.26	□□□□□ -1.57
SPI1	YER150W	MAM3	Q12296	706 aa		5.26	□□□□□ -1.57
SPI1	YER150W	VPS70	P47161	811 aa		5.25	□□□□□ -1.57
SPI1	YER150W	GYP5	Q12344	894 aa		5.25	□□□□□ -1.57
SPI1	YER150W	DCW1	P36091	449 aa		5.24	□□□□□ -1.57
SPI1	YER150W	RPS0B	P46654	252 aa	Known RBP	5.24	□□□□□ -1.57
SPI1	YER150W	HTA1	P04911	132 aa	Known RBP	5.23	□□□□□ -1.57
SPI1	YER150W	HTA2	P04912	132 aa		5.23	□□□□□ -1.57
SPI1	YER150W	RCR1	P38212	213 aa		5.23	□□□□□ -1.57
SPI1	YER150W	DSF2	P38213	736 aa		5.23	□□□□□ -1.57
SPI1	YER150W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
SPI1	YER150W	YJR008W	P47085	338 aa		5.23	□□□□□ -1.57
SPI1	YER150W	TPO2	P53283	614 aa		5.23	□□□□□ -1.57
SPI1	YER150W	YPR148C	Q06523	435 aa		5.23	□□□□□ -1.57
SPI1	YER150W	AIM7	Q12156	149 aa		5.23	□□□□□ -1.57
SPI1	YER150W	PTC4	P38089	393 aa		5.22	□□□□□ -1.57
SPI1	YER150W	SSF1	P38789	453 aa	Predicted RBP	5.22	□□□□□ -1.57
SPI1	YER150W	HEM3	P28789	327 aa		5.21	□□□□□ -1.58
SPI1	YER150W	RRN6	P32786	894 aa		5.21	□□□□□ -1.58
SPI1	YER150W	YEL023C	P39992	682 aa		5.21	□□□□□ -1.58
SPI1	YER150W	GUA1	P38625	525 aa	Known RBP	5.2	□□□□□ -1.58
SPI1	YER150W	OCA5	P38738	679 aa		5.2	□□□□□ -1.58
SPI1	YER150W	YAF9	P53930	226 aa		5.2	□□□□□ -1.58
SPI1	YER150W	VRP1	P37370	817 aa		5.19	□□□□□ -1.58
SPI1	YER150W	SET1	P38827	1080 aa	Known RBP	5.19	□□□□□ -1.58
SPI1	YER150W	FPR4	Q06205	392 aa	Predicted RBP	5.19	□□□□□ -1.58
SPI1	YER150W	BUD21	Q08492	214 aa	Predicted RBP	5.19	□□□□□ -1.58
SPI1	YER150W	GLC3	P32775	704 aa		5.18	□□□□□ -1.58
SPI1	YER150W	XDJ1	P39102	459 aa		5.18	□□□□□ -1.58
SPI1	YER150W	HPC2	Q01448	625 aa		5.18	□□□□□ -1.58
SPI1	YER150W	NMD2	P38798	1089 aa	Known RBP	5.17	□□□□□ -1.58
SPI1	YER150W	YDR344C	Q05510	147 aa		5.17	□□□□□ -1.58
SPI1	YER150W	PBS2	P08018	668 aa		5.16	□□□□□ -1.58
SPI1	YER150W	PDR1	P12383	1068 aa		5.16	□□□□□ -1.58
SPI1	YER150W	SSA4	P22202	642 aa	Known RBP	5.16	□□□□□ -1.58
SPI1	YER150W	TOA1	P32773	286 aa		5.16	□□□□□ -1.58
SPI1	YER150W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
SPI1	YER150W	ELP4	Q02884	456 aa	Known RBP	5.14	□□□□□ -1.59
SPI1	YER150W	TOM20	P35180	183 aa		5.13	□□□□□ -1.59
SPI1	YER150W	PML39	Q03760	334 aa		5.13	□□□□□ -1.59
SPI1	YER150W	UBX5	Q06682	500 aa		5.13	□□□□□ -1.59
SPI1	YER150W	HIF1	Q12373	385 aa		5.13	□□□□□ -1.59
SPI1	YER150W	CDC3	P32457	520 aa	Known RBP	5.12	□□□□□ -1.59
SPI1	YER150W	ALD4	P46367	519 aa	Known RBP	5.12	□□□□□ -1.59
SPI1	YER150W	NNF1	P47149	201 aa		5.12	□□□□□ -1.59
SPI1	YER150W	ZDS1	P50111	915 aa	Known RBP	5.12	□□□□□ -1.59
SPI1	YER150W	RPL34A	P87262	121 aa	Predicted RBP	5.12	□□□□□ -1.59
SPI1	YER150W	SEN54	Q02825	467 aa	Predicted RBP	5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms