RNA–Protein interactions for RNA: YEL052W

AFG1, Transcript of Protein that may act as a chaperone for cytochrome c oxidase subunits, yeastyeast

Gene AFG1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG1YEL052W TY1B-ER2Q03619 1755 aa9.36□□□□□ -0.91
AFG1YEL052W TY1B-MR1Q04214 1755 aa9.36□□□□□ -0.91
AFG1YEL052W TY1B-MR2Q04670 1755 aaKnown RBP9.36□□□□□ -0.91
AFG1YEL052W TY1B-LR1Q12088 1755 aaKnown RBP9.36□□□□□ -0.91
AFG1YEL052W TY1B-NL1Q12112 1755 aa9.36□□□□□ -0.91
AFG1YEL052W TY1B-GR1Q12141 1755 aa9.36□□□□□ -0.91
AFG1YEL052W TY1B-BLQ12490 1755 aa9.36□□□□□ -0.91
AFG1YEL052W REB1P21538 810 aa9.35□□□□□ -0.91
AFG1YEL052W UBP10P53874 792 aaPredicted RBP9.35□□□□□ -0.91
AFG1YEL052W SPP41P38904 1435 aa9.34□□□□□ -0.91
AFG1YEL052W MAP2P38174 421 aaKnown RBP9.31□□□□□ -0.92
AFG1YEL052W DIP2Q12220 943 aaPredicted RBP9.31□□□□□ -0.92
AFG1YEL052W NTE1Q04958 1679 aa9.3□□□□□ -0.92
AFG1YEL052W VTH1P40438 1549 aa9.3□□□□□ -0.92
AFG1YEL052W VTH2P40890 1549 aa9.3□□□□□ -0.92
AFG1YEL052W TSC11P40061 1430 aa9.27□□□□□ -0.93
AFG1YEL052W RPL17AP05740 184 aaKnown RBP9.26□□□□□ -0.93
AFG1YEL052W RPL17BP46990 184 aaKnown RBP9.26□□□□□ -0.93
AFG1YEL052W RPO21P04050 1733 aaKnown RBP9.26□□□□□ -0.93
AFG1YEL052W MET5P47169 1442 aa9.26□□□□□ -0.93
AFG1YEL052W TRM732Q03496 1420 aa9.26□□□□□ -0.93
AFG1YEL052W MLP2P40457 1679 aa9.24□□□□□ -0.93
AFG1YEL052W SNQ2P32568 1501 aaKnown RBP9.21□□□□□ -0.93
AFG1YEL052W YRF1-1P0CX20 1796 aa9.21□□□□□ -0.93
AFG1YEL052W YRF1-5P0CX21 1796 aa9.21□□□□□ -0.93
AFG1YEL052W YRF1-8P0CX22 1796 aa9.21□□□□□ -0.93
AFG1YEL052W ULS1Q08562 1619 aa9.18□□□□□ -0.94
AFG1YEL052W NUP159P40477 1460 aa9.17□□□□□ -0.94
AFG1YEL052W UBP9P39967 754 aa9.15□□□□□ -0.95
AFG1YEL052W PDR15Q04182 1529 aaKnown RBP9.14□□□□□ -0.95
AFG1YEL052W SNT2P53127 1403 aa9.13□□□□□ -0.95
AFG1YEL052W STH1P32597 1359 aa9.12□□□□□ -0.95
AFG1YEL052W LTE1P07866 1435 aa9.09□□□□□ -0.95
AFG1YEL052W VPS15P22219 1454 aa9.08□□□□□ -0.96
AFG1YEL052W SAS10Q12136 610 aaPredicted RBP9.07□□□□□ -0.96
AFG1YEL052W GEA2P39993 1459 aaKnown RBP9.07□□□□□ -0.96
AFG1YEL052W IRC20Q06554 1556 aa9.06□□□□□ -0.96
AFG1YEL052W SPO14P36126 1683 aa9.05□□□□□ -0.96
AFG1YEL052W PDR12Q02785 1511 aa9.03□□□□□ -0.96
AFG1YEL052W YKR023WP36119 530 aaKnown RBP9.02□□□□□ -0.97
AFG1YEL052W BNI1P41832 1953 aa9□□□□□ -0.97
AFG1YEL052W YBT1P32386 1661 aa9□□□□□ -0.97
AFG1YEL052W GDB1Q06625 1536 aa9□□□□□ -0.97
AFG1YEL052W GEA1P47102 1408 aaPredicted RBP8.97□□□□□ -0.97
AFG1YEL052W TY3B-GQ99315 1547 aa8.97□□□□□ -0.97
AFG1YEL052W TIF4632P39936 914 aaKnown RBP8.96□□□□□ -0.97
AFG1YEL052W RTT106P40161 455 aa8.95□□□□□ -0.98
AFG1YEL052W TGL3P40308 642 aa8.95□□□□□ -0.98
AFG1YEL052W NUP170P38181 1502 aa8.95□□□□□ -0.98
AFG1YEL052W AVT3P36062 692 aa8.95□□□□□ -0.98
AFG1YEL052W MET10P39692 1035 aa8.93□□□□□ -0.98
AFG1YEL052W PDR10P51533 1564 aa8.92□□□□□ -0.98
AFG1YEL052W DRS2P39524 1355 aa8.9□□□□□ -0.98
AFG1YEL052W IFH1P39520 1085 aa8.9□□□□□ -0.99
AFG1YEL052W DOP1Q03921 1698 aa8.89□□□□□ -0.99
AFG1YEL052W CAT8P39113 1433 aa8.89□□□□□ -0.99
AFG1YEL052W NUP157P40064 1391 aaKnown RBP8.88□□□□□ -0.99
AFG1YEL052W IQG1Q12280 1495 aa8.87□□□□□ -0.99
AFG1YEL052W BUD3P25558 1636 aa8.87□□□□□ -0.99
AFG1YEL052W ARO1P08566 1588 aaKnown RBP8.86□□□□□ -0.99
AFG1YEL052W DCD1P06773 312 aa8.85□□□□□ -0.99
AFG1YEL052W ITT1Q04638 464 aa8.85□□□□□ -0.99
AFG1YEL052W SCY1P53009 804 aa8.84□□□□□ -0.99
AFG1YEL052W CHC1P22137 1653 aaKnown RBP8.83□□□□□ -1
AFG1YEL052W HOP09932 586 aa8.83□□□□□ -1
AFG1YEL052W TFC8Q12308 588 aa8.82□□□□□ -1
AFG1YEL052W TRM3Q07527 1436 aa8.82□□□□□ -1
AFG1YEL052W SLX5P32828 619 aaKnown RBP8.8□□□□□ -1
AFG1YEL052W MMS1Q06211 1407 aa8.8□□□□□ -1
AFG1YEL052W DNF2Q12675 1612 aa8.79□□□□□ -1
AFG1YEL052W SEC7P11075 2009 aaKnown RBP8.79□□□□□ -1
AFG1YEL052W SPT21P35209 758 aa8.76□□□□□ -1.01
AFG1YEL052W NOP2P40991 618 aaKnown RBP8.75□□□□□ -1.01
AFG1YEL052W YSP2Q06681 1438 aa8.74□□□□□ -1.01
AFG1YEL052W IKI3Q06706 1349 aaKnown RBP8.73□□□□□ -1.01
AFG1YEL052W SRB8P25648 1427 aa8.71□□□□□ -1.02
AFG1YEL052W CKB1P43639 278 aa8.68□□□□□ -1.02
AFG1YEL052W YOR093CQ12275 1648 aa8.65□□□□□ -1.02
AFG1YEL052W BNR1P40450 1375 aa8.64□□□□□ -1.03
AFG1YEL052W SSM4P40318 1319 aa8.62□□□□□ -1.03
AFG1YEL052W GCN2P15442 1659 aa8.59□□□□□ -1.03
AFG1YEL052W URN1Q06525 465 aaKnown RBP8.59□□□□□ -1.03
AFG1YEL052W NUP188P52593 1655 aaKnown RBP8.57□□□□□ -1.04
AFG1YEL052W DNF3Q12674 1656 aa8.57□□□□□ -1.04
AFG1YEL052W ABP1P15891 592 aaKnown RBP8.56□□□□□ -1.04
AFG1YEL052W VMR1P38735 1592 aa8.55□□□□□ -1.04
AFG1YEL052W BUD21Q08492 214 aaPredicted RBP8.54□□□□□ -1.04
AFG1YEL052W NSR1P27476 414 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
AFG1YEL052W YBL029C-AQ3E756 94 aa8.53□□□□□ -1.04
AFG1YEL052W PDR5P33302 1511 aaKnown RBP8.51□□□□□ -1.05
AFG1YEL052W IML1P47170 1584 aa8.48□□□□□ -1.05
AFG1YEL052W MIF2P35201 549 aa8.48□□□□□ -1.05
AFG1YEL052W BCH2P36122 765 aa8.48□□□□□ -1.05
AFG1YEL052W LEO1P38439 464 aa8.45□□□□□ -1.06
AFG1YEL052W YAP3P38749 330 aa8.44□□□□□ -1.06
AFG1YEL052W HAP1P0CE41 1502 aa8.44□□□□□ -1.06
AFG1YEL052W MST1P07236 462 aa8.4□□□□□ -1.06
AFG1YEL052W USO1P25386 1790 aa8.39□□□□□ -1.07
AFG1YEL052W PDR11P40550 1411 aa8.38□□□□□ -1.07
AFG1YEL052W IPL1P38991 367 aa8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms