RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W HAA1Q12753 694 aaKnown RBP3.12□□□□□ -1.91
SPF1YEL031W RPL17AP05740 184 aaKnown RBP3.12□□□□□ -1.91
SPF1YEL031W RPL17BP46990 184 aaKnown RBP3.12□□□□□ -1.91
SPF1YEL031W MYO4P32492 1471 aa3.11□□□□□ -1.91
SPF1YEL031W POL1P13382 1468 aa3.11□□□□□ -1.91
SPF1YEL031W REB1P21538 810 aa3.1□□□□□ -1.91
SPF1YEL031W YCK3P39962 524 aa3.1□□□□□ -1.91
SPF1YEL031W TCB2P48231 1178 aa3.1□□□□□ -1.91
SPF1YEL031W PAN1P32521 1480 aa3.1□□□□□ -1.91
SPF1YEL031W YCF1P39109 1515 aaKnown RBP3.1□□□□□ -1.91
SPF1YEL031W EAF7P53911 425 aaKnown RBP3.1□□□□□ -1.91
SPF1YEL031W RPO31P04051 1460 aa3.1□□□□□ -1.91
SPF1YEL031W SCC2Q04002 1493 aa3.1□□□□□ -1.91
SPF1YEL031W SAS10Q12136 610 aaPredicted RBP3.09□□□□□ -1.91
SPF1YEL031W RPO21P04050 1733 aaKnown RBP3.09□□□□□ -1.91
SPF1YEL031W NUP170P38181 1502 aa3.09□□□□□ -1.91
SPF1YEL031W SCT1P32784 759 aa3.09□□□□□ -1.92
SPF1YEL031W YRF1-1P0CX20 1796 aa3.09□□□□□ -1.92
SPF1YEL031W YRF1-5P0CX21 1796 aa3.09□□□□□ -1.92
SPF1YEL031W YRF1-8P0CX22 1796 aa3.09□□□□□ -1.92
SPF1YEL031W AAD16Q02895 342 aa3.08□□□□□ -1.92
SPF1YEL031W NTE1Q04958 1679 aa3.08□□□□□ -1.92
SPF1YEL031W CLC1P17891 233 aa3.07□□□□□ -1.92
SPF1YEL031W SPT7P35177 1332 aa3.07□□□□□ -1.92
SPF1YEL031W ESC1Q03661 1658 aaKnown RBP3.05□□□□□ -1.92
SPF1YEL031W PRS1P32895 427 aaKnown RBP3.05□□□□□ -1.92
SPF1YEL031W CDC25P04821 1589 aa3.05□□□□□ -1.92
SPF1YEL031W SIS2P36024 562 aa3.05□□□□□ -1.92
SPF1YEL031W YPR148CQ06523 435 aa3.05□□□□□ -1.92
SPF1YEL031W MLP2P40457 1679 aa3.04□□□□□ -1.92
SPF1YEL031W MHP1P43638 1398 aa3.04□□□□□ -1.92
SPF1YEL031W YOR1P53049 1477 aa3.04□□□□□ -1.92
SPF1YEL031W SSM4P40318 1319 aa3.04□□□□□ -1.92
SPF1YEL031W RIX1P38883 763 aaPredicted RBP3.03□□□□□ -1.92
SPF1YEL031W FPR3P38911 411 aaKnown RBP3.03□□□□□ -1.92
SPF1YEL031W SRB8P25648 1427 aa3.03□□□□□ -1.92
SPF1YEL031W RTT106P40161 455 aa3.03□□□□□ -1.92
SPF1YEL031W BPT1P14772 1559 aa3.03□□□□□ -1.92
SPF1YEL031W LEO1P38439 464 aa3.02□□□□□ -1.93
SPF1YEL031W YLR419WQ06698 1435 aaKnown RBP3.02□□□□□ -1.93
SPF1YEL031W ULS1Q08562 1619 aa3.02□□□□□ -1.93
SPF1YEL031W IRC20Q06554 1556 aa3.02□□□□□ -1.93
SPF1YEL031W PRI1P10363 409 aa3.01□□□□□ -1.93
SPF1YEL031W RLF2Q12495 606 aa3.01□□□□□ -1.93
SPF1YEL031W RKR1Q04781 1562 aa3.01□□□□□ -1.93
SPF1YEL031W TOP2P06786 1428 aaKnown RBP3.01□□□□□ -1.93
SPF1YEL031W SNQ2P32568 1501 aaKnown RBP3.01□□□□□ -1.93
SPF1YEL031W TSC11P40061 1430 aa3.01□□□□□ -1.93
SPF1YEL031W GEA1P47102 1408 aaPredicted RBP3.01□□□□□ -1.93
SPF1YEL031W PTP3P40048 928 aa3.01□□□□□ -1.93
SPF1YEL031W RPP0P05317 312 aaKnown RBP3□□□□□ -1.93
SPF1YEL031W TSR3Q12094 313 aaKnown RBP3□□□□□ -1.93
SPF1YEL031W NUP159P40477 1460 aa3□□□□□ -1.93
SPF1YEL031W IME2P32581 645 aa3□□□□□ -1.93
SPF1YEL031W YRB30P53107 440 aaPredicted RBP3□□□□□ -1.93
SPF1YEL031W NOP7P53261 605 aaKnown RBP3□□□□□ -1.93
SPF1YEL031W BNI1P41832 1953 aa3□□□□□ -1.93
SPF1YEL031W DNF1P32660 1571 aa3□□□□□ -1.93
SPF1YEL031W RPC31P17890 251 aa2.99□□□□□ -1.93
SPF1YEL031W YBT1P32386 1661 aa2.99□□□□□ -1.93
SPF1YEL031W SNF7P39929 240 aaKnown RBP2.99□□□□□ -1.93
SPF1YEL031W AIM44Q99299 758 aa2.99□□□□□ -1.93
SPF1YEL031W SPO14P36126 1683 aa2.99□□□□□ -1.93
SPF1YEL031W CDC45Q08032 650 aa2.98□□□□□ -1.93
SPF1YEL031W PDR10P51533 1564 aa2.98□□□□□ -1.93
SPF1YEL031W URN1Q06525 465 aaKnown RBP2.98□□□□□ -1.93
SPF1YEL031W ABP1P15891 592 aaKnown RBP2.97□□□□□ -1.93
SPF1YEL031W YIR014WP40570 242 aa2.97□□□□□ -1.93
SPF1YEL031W PAF1P38351 445 aa2.97□□□□□ -1.93
SPF1YEL031W IFH1P39520 1085 aa2.97□□□□□ -1.93
SPF1YEL031W PDR5P33302 1511 aaKnown RBP2.96□□□□□ -1.93
SPF1YEL031W IOC4Q04213 475 aa2.96□□□□□ -1.94
SPF1YEL031W CAT8P39113 1433 aa2.96□□□□□ -1.94
SPF1YEL031W YFR016CP43597 1233 aaKnown RBP2.96□□□□□ -1.94
SPF1YEL031W VPS27P40343 622 aaKnown RBP2.95□□□□□ -1.94
SPF1YEL031W NOP58Q12499 511 aaKnown RBP2.95□□□□□ -1.94
SPF1YEL031W RPS0BP46654 252 aaKnown RBP2.95□□□□□ -1.94
SPF1YEL031W PDR15Q04182 1529 aaKnown RBP2.95□□□□□ -1.94
SPF1YEL031W ROX1P25042 368 aa2.94□□□□□ -1.94
SPF1YEL031W OPY1P38271 328 aa2.94□□□□□ -1.94
SPF1YEL031W MMS1Q06211 1407 aa2.94□□□□□ -1.94
SPF1YEL031W CHC1P22137 1653 aaKnown RBP2.94□□□□□ -1.94
SPF1YEL031W VPS24P36095 224 aaKnown RBP2.94□□□□□ -1.94
SPF1YEL031W NOP53Q12080 455 aaKnown RBP2.94□□□□□ -1.94
SPF1YEL031W PDR12Q02785 1511 aa2.93□□□□□ -1.94
SPF1YEL031W EDE1P34216 1381 aa2.93□□□□□ -1.94
SPF1YEL031W VPS15P22219 1454 aa2.93□□□□□ -1.94
SPF1YEL031W RNA1P11745 407 aaKnown RBP2.93□□□□□ -1.94
SPF1YEL031W PSD2P53037 1138 aaKnown RBP2.93□□□□□ -1.94
SPF1YEL031W YAH1Q12184 172 aaKnown RBP2.93□□□□□ -1.94
SPF1YEL031W DOP1Q03921 1698 aa2.93□□□□□ -1.94
SPF1YEL031W LEU3P08638 886 aa2.92□□□□□ -1.94
SPF1YEL031W RIM101P33400 625 aa2.92□□□□□ -1.94
SPF1YEL031W SPT21P35209 758 aa2.92□□□□□ -1.94
SPF1YEL031W PDS5Q04264 1277 aa2.92□□□□□ -1.94
SPF1YEL031W LSP1Q12230 341 aaKnown RBP2.92□□□□□ -1.94
SPF1YEL031W GCN2P15442 1659 aa2.92□□□□□ -1.94
SPF1YEL031W TY3B-GQ99315 1547 aa2.92□□□□□ -1.94
SPF1YEL031W NOT3P06102 836 aaKnown RBP2.92□□□□□ -1.94
SPF1YEL031W COG8Q04632 607 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms