RNA–Protein interactions for RNA: YDR490C

PKH1, Transcript of Serine/threonine protein kinase, yeastyeast

Gene PKH1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKH1YDR490C TY1B-ER2Q03619 1755 aa5.32□□□□□ -1.56
PKH1YDR490C TY1B-MR1Q04214 1755 aa5.32□□□□□ -1.56
PKH1YDR490C TY1B-MR2Q04670 1755 aaKnown RBP5.32□□□□□ -1.56
PKH1YDR490C TY1B-LR1Q12088 1755 aaKnown RBP5.32□□□□□ -1.56
PKH1YDR490C TY1B-NL1Q12112 1755 aa5.32□□□□□ -1.56
PKH1YDR490C TY1B-GR1Q12141 1755 aa5.32□□□□□ -1.56
PKH1YDR490C TY1B-BLQ12490 1755 aa5.32□□□□□ -1.56
PKH1YDR490C YOR093CQ12275 1648 aa5.3□□□□□ -1.56
PKH1YDR490C SMC4Q12267 1418 aa5.29□□□□□ -1.56
PKH1YDR490C POL1P13382 1468 aa5.29□□□□□ -1.56
PKH1YDR490C SPP41P38904 1435 aa5.27□□□□□ -1.57
PKH1YDR490C NUP170P38181 1502 aa5.27□□□□□ -1.57
PKH1YDR490C YOR1P53049 1477 aa5.27□□□□□ -1.57
PKH1YDR490C SPO14P36126 1683 aa5.26□□□□□ -1.57
PKH1YDR490C VTH1P40438 1549 aa5.25□□□□□ -1.57
PKH1YDR490C VTH2P40890 1549 aa5.25□□□□□ -1.57
PKH1YDR490C YCK3P39962 524 aa5.25□□□□□ -1.57
PKH1YDR490C TFA1P36100 482 aa5.24□□□□□ -1.57
PKH1YDR490C TSC11P40061 1430 aa5.24□□□□□ -1.57
PKH1YDR490C SNT2P53127 1403 aa5.24□□□□□ -1.57
PKH1YDR490C MYO4P32492 1471 aa5.22□□□□□ -1.57
PKH1YDR490C DOP1Q03921 1698 aa5.21□□□□□ -1.57
PKH1YDR490C TRM3Q07527 1436 aa5.21□□□□□ -1.58
PKH1YDR490C ULS1Q08562 1619 aa5.2□□□□□ -1.58
PKH1YDR490C SNQ2P32568 1501 aaKnown RBP5.18□□□□□ -1.58
PKH1YDR490C STU1P38198 1513 aa5.18□□□□□ -1.58
PKH1YDR490C PDR12Q02785 1511 aa5.17□□□□□ -1.58
PKH1YDR490C AAD16Q02895 342 aa5.15□□□□□ -1.58
PKH1YDR490C GDB1Q06625 1536 aa5.13□□□□□ -1.59
PKH1YDR490C BUD3P25558 1636 aa5.12□□□□□ -1.59
PKH1YDR490C MLP2P40457 1679 aa5.12□□□□□ -1.59
PKH1YDR490C IQG1Q12280 1495 aa5.11□□□□□ -1.59
PKH1YDR490C BFR2Q06631 534 aaKnown RBP5.11□□□□□ -1.59
PKH1YDR490C CHC1P22137 1653 aaKnown RBP5.11□□□□□ -1.59
PKH1YDR490C PDR10P51533 1564 aa5.11□□□□□ -1.59
PKH1YDR490C DNF3Q12674 1656 aa5.11□□□□□ -1.59
PKH1YDR490C MET10P39692 1035 aa5.1□□□□□ -1.59
PKH1YDR490C PDR15Q04182 1529 aaKnown RBP5.08□□□□□ -1.6
PKH1YDR490C STH1P32597 1359 aa5.07□□□□□ -1.6
PKH1YDR490C ARO1P08566 1588 aaKnown RBP5.06□□□□□ -1.6
PKH1YDR490C YTA7P40340 1379 aa5.03□□□□□ -1.6
PKH1YDR490C NUP157P40064 1391 aaKnown RBP5.02□□□□□ -1.61
PKH1YDR490C TY3B-GQ99315 1547 aa5□□□□□ -1.61
PKH1YDR490C TAF7Q05021 590 aa4.99□□□□□ -1.61
PKH1YDR490C PRI1P10363 409 aa4.98□□□□□ -1.61
PKH1YDR490C RTT106P40161 455 aa4.98□□□□□ -1.61
PKH1YDR490C SEC7P11075 2009 aaKnown RBP4.95□□□□□ -1.62
PKH1YDR490C USO1P25386 1790 aa4.94□□□□□ -1.62
PKH1YDR490C HAP1P0CE41 1502 aa4.93□□□□□ -1.62
PKH1YDR490C BNR1P40450 1375 aa4.92□□□□□ -1.62
PKH1YDR490C TY1B-NL2Q99337 1749 aaKnown RBP4.92□□□□□ -1.62
PKH1YDR490C YAP3P38749 330 aa4.91□□□□□ -1.62
PKH1YDR490C MAK10Q02197 733 aa4.91□□□□□ -1.62
PKH1YDR490C CAT8P39113 1433 aa4.9□□□□□ -1.62
PKH1YDR490C YBT1P32386 1661 aa4.88□□□□□ -1.63
PKH1YDR490C BUD31P25337 157 aaPredicted RBP4.87□□□□□ -1.63
PKH1YDR490C NUP188P52593 1655 aaKnown RBP4.86□□□□□ -1.63
PKH1YDR490C URN1Q06525 465 aaKnown RBP4.86□□□□□ -1.63
PKH1YDR490C IML1P47170 1584 aa4.84□□□□□ -1.63
PKH1YDR490C YSP2Q06681 1438 aa4.84□□□□□ -1.63
PKH1YDR490C YMR196WQ04336 1088 aa4.84□□□□□ -1.63
PKH1YDR490C SAS10Q12136 610 aaPredicted RBP4.83□□□□□ -1.64
PKH1YDR490C VMR1P38735 1592 aa4.81□□□□□ -1.64
PKH1YDR490C NSR1P27476 414 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
PKH1YDR490C YAH1Q12184 172 aaKnown RBP4.78□□□□□ -1.64
PKH1YDR490C GLN1P32288 370 aaKnown RBP4.78□□□□□ -1.64
PKH1YDR490C THI12P42883 340 aa4.78□□□□□ -1.64
PKH1YDR490C THI5P43534 340 aa4.78□□□□□ -1.64
PKH1YDR490C THI11P47183 340 aa4.78□□□□□ -1.64
PKH1YDR490C THI13Q07748 340 aa4.78□□□□□ -1.64
PKH1YDR490C GEA1P47102 1408 aaPredicted RBP4.77□□□□□ -1.65
PKH1YDR490C NOP2P40991 618 aaKnown RBP4.77□□□□□ -1.65
PKH1YDR490C IKI3Q06706 1349 aaKnown RBP4.73□□□□□ -1.65
PKH1YDR490C IPL1P38991 367 aa4.72□□□□□ -1.65
PKH1YDR490C YGL015CP33199 130 aa4.71□□□□□ -1.66
PKH1YDR490C YIL055CP40523 627 aaKnown RBP4.71□□□□□ -1.66
PKH1YDR490C CKB1P43639 278 aa4.71□□□□□ -1.66
PKH1YDR490C BCK1Q01389 1478 aa4.7□□□□□ -1.66
PKH1YDR490C SRB8P25648 1427 aa4.7□□□□□ -1.66
PKH1YDR490C IFH1P39520 1085 aa4.7□□□□□ -1.66
PKH1YDR490C SSM4P40318 1319 aa4.68□□□□□ -1.66
PKH1YDR490C YMR074CQ04773 145 aa4.67□□□□□ -1.66
PKH1YDR490C PTP3P40048 928 aa4.66□□□□□ -1.66
PKH1YDR490C YRF1-2P40105 1681 aa4.65□□□□□ -1.66
PKH1YDR490C PDR5P33302 1511 aaKnown RBP4.64□□□□□ -1.67
PKH1YDR490C PDR11P40550 1411 aa4.64□□□□□ -1.67
PKH1YDR490C TYS1P36421 394 aaKnown RBP4.63□□□□□ -1.67
PKH1YDR490C CFT1Q06632 1357 aaKnown RBP4.63□□□□□ -1.67
PKH1YDR490C AVT3P36062 692 aa4.62□□□□□ -1.67
PKH1YDR490C APP1P53933 587 aa4.62□□□□□ -1.67
PKH1YDR490C TSR3Q12094 313 aaKnown RBP4.62□□□□□ -1.67
PKH1YDR490C POL5P39985 1022 aaKnown RBP4.62□□□□□ -1.67
PKH1YDR490C GCN2P15442 1659 aa4.61□□□□□ -1.67
PKH1YDR490C ENP1P38333 483 aaKnown RBP4.6□□□□□ -1.67
PKH1YDR490C BUD21Q08492 214 aaPredicted RBP4.59□□□□□ -1.67
PKH1YDR490C NUP192P47054 1683 aa4.58□□□□□ -1.68
PKH1YDR490C RRP5Q05022 1729 aaKnown RBP4.58□□□□□ -1.68
PKH1YDR490C SPT7P35177 1332 aa4.58□□□□□ -1.68
PKH1YDR490C REB1P21538 810 aa4.57□□□□□ -1.68
PKH1YDR490C DMA1P38823 416 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms