RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C YRF1-5P0CX21 1796 aa5.87□□□□□ -1.47
TRS120YDR407C YRF1-8P0CX22 1796 aa5.87□□□□□ -1.47
TRS120YDR407C GCN2P15442 1659 aa5.85□□□□□ -1.47
TRS120YDR407C VTH1P40438 1549 aa5.84□□□□□ -1.47
TRS120YDR407C VTH2P40890 1549 aa5.84□□□□□ -1.47
TRS120YDR407C PDR12Q02785 1511 aa5.78□□□□□ -1.48
TRS120YDR407C SPO14P36126 1683 aa5.78□□□□□ -1.48
TRS120YDR407C SPP41P38904 1435 aa5.76□□□□□ -1.49
TRS120YDR407C ARO1P08566 1588 aaKnown RBP5.75□□□□□ -1.49
TRS120YDR407C DNF1P32660 1571 aa5.75□□□□□ -1.49
TRS120YDR407C GDB1Q06625 1536 aa5.74□□□□□ -1.49
TRS120YDR407C CHC1P22137 1653 aaKnown RBP5.74□□□□□ -1.49
TRS120YDR407C PAN1P32521 1480 aa5.72□□□□□ -1.49
TRS120YDR407C YOR093CQ12275 1648 aa5.71□□□□□ -1.49
TRS120YDR407C IQG1Q12280 1495 aa5.71□□□□□ -1.5
TRS120YDR407C RSE1Q04693 1361 aaKnown RBP5.71□□□□□ -1.5
TRS120YDR407C IKI3Q06706 1349 aaKnown RBP5.7□□□□□ -1.5
TRS120YDR407C TSC11P40061 1430 aa5.68□□□□□ -1.5
TRS120YDR407C GEA2P39993 1459 aaKnown RBP5.67□□□□□ -1.5
TRS120YDR407C GEA1P47102 1408 aaPredicted RBP5.66□□□□□ -1.5
TRS120YDR407C CAT8P39113 1433 aa5.64□□□□□ -1.51
TRS120YDR407C NUP159P40477 1460 aa5.62□□□□□ -1.51
TRS120YDR407C DOP1Q03921 1698 aa5.61□□□□□ -1.51
TRS120YDR407C VPS15P22219 1454 aa5.61□□□□□ -1.51
TRS120YDR407C NUP192P47054 1683 aa5.6□□□□□ -1.51
TRS120YDR407C VMR1P38735 1592 aa5.6□□□□□ -1.51
TRS120YDR407C SSM4P40318 1319 aa5.59□□□□□ -1.52
TRS120YDR407C TY3B-IQ7LHG5 1498 aaKnown RBP5.56□□□□□ -1.52
TRS120YDR407C NUP188P52593 1655 aaKnown RBP5.56□□□□□ -1.52
TRS120YDR407C HAP1P0CE41 1502 aa5.55□□□□□ -1.52
TRS120YDR407C SEC7P11075 2009 aaKnown RBP5.53□□□□□ -1.52
TRS120YDR407C BUD3P25558 1636 aa5.51□□□□□ -1.53
TRS120YDR407C STH1P32597 1359 aa5.5□□□□□ -1.53
TRS120YDR407C DNF3Q12674 1656 aa5.48□□□□□ -1.53
TRS120YDR407C YLR419WQ06698 1435 aaKnown RBP5.48□□□□□ -1.53
TRS120YDR407C DNF2Q12675 1612 aa5.48□□□□□ -1.53
TRS120YDR407C TY1B-NL2Q99337 1749 aaKnown RBP5.47□□□□□ -1.53
TRS120YDR407C MET5P47169 1442 aa5.47□□□□□ -1.53
TRS120YDR407C YSP2Q06681 1438 aa5.46□□□□□ -1.54
TRS120YDR407C BNI1P41832 1953 aa5.45□□□□□ -1.54
TRS120YDR407C SRB8P25648 1427 aa5.45□□□□□ -1.54
TRS120YDR407C TAF7Q05021 590 aa5.39□□□□□ -1.55
TRS120YDR407C IML1P47170 1584 aa5.38□□□□□ -1.55
TRS120YDR407C MLP1Q02455 1875 aaKnown RBP5.37□□□□□ -1.55
TRS120YDR407C MMS1Q06211 1407 aa5.37□□□□□ -1.55
TRS120YDR407C TRM3Q07527 1436 aa5.36□□□□□ -1.55
TRS120YDR407C APC1P53886 1748 aa5.34□□□□□ -1.56
TRS120YDR407C USO1P25386 1790 aa5.33□□□□□ -1.56
TRS120YDR407C LTE1P07866 1435 aa5.33□□□□□ -1.56
TRS120YDR407C PDR11P40550 1411 aa5.33□□□□□ -1.56
TRS120YDR407C YIL177CP40434 1758 aa5.32□□□□□ -1.56
TRS120YDR407C YJL225CP40889 1758 aa5.32□□□□□ -1.56
TRS120YDR407C SNF2P22082 1703 aa5.32□□□□□ -1.56
TRS120YDR407C NSR1P27476 414 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
TRS120YDR407C RRP5Q05022 1729 aaKnown RBP5.27□□□□□ -1.57
TRS120YDR407C RAV1P47104 1357 aa5.25□□□□□ -1.57
TRS120YDR407C NUP157P40064 1391 aaKnown RBP5.24□□□□□ -1.57
TRS120YDR407C TY4B-HP0C2J7 1802 aa5.24□□□□□ -1.57
TRS120YDR407C TY4B-JP47024 1803 aa5.24□□□□□ -1.57
TRS120YDR407C BCK1Q01389 1478 aa5.21□□□□□ -1.58
TRS120YDR407C IOC4Q04213 475 aa5.2□□□□□ -1.58
TRS120YDR407C SEC3P33332 1336 aaKnown RBP5.17□□□□□ -1.58
TRS120YDR407C RTC1Q08281 1341 aa5.17□□□□□ -1.58
TRS120YDR407C MHP1P43638 1398 aa5.17□□□□□ -1.58
TRS120YDR407C YRF1-2P40105 1681 aa5.16□□□□□ -1.58
TRS120YDR407C SAS10Q12136 610 aaPredicted RBP5.16□□□□□ -1.58
TRS120YDR407C URB1P34241 1764 aaKnown RBP5.15□□□□□ -1.59
TRS120YDR407C FKS3Q04952 1785 aa5.14□□□□□ -1.59
TRS120YDR407C ENP1P38333 483 aaKnown RBP5.13□□□□□ -1.59
TRS120YDR407C DUR1,2P32528 1835 aaKnown RBP5.12□□□□□ -1.59
TRS120YDR407C MET10P39692 1035 aa5.12□□□□□ -1.59
TRS120YDR407C BNR1P40450 1375 aa5.11□□□□□ -1.59
TRS120YDR407C PRS1P32895 427 aaKnown RBP5.1□□□□□ -1.59
TRS120YDR407C YML133CQ03099 1374 aa5.1□□□□□ -1.59
TRS120YDR407C YLL067CQ07888 1374 aa5.1□□□□□ -1.59
TRS120YDR407C YLL066CQ99208 1374 aa5.1□□□□□ -1.59
TRS120YDR407C DRS2P39524 1355 aa5.09□□□□□ -1.59
TRS120YDR407C UTP10P42945 1769 aaKnown RBP5.06□□□□□ -1.6
TRS120YDR407C IFH1P39520 1085 aa5.05□□□□□ -1.6
TRS120YDR407C SPT7P35177 1332 aa5.05□□□□□ -1.6
TRS120YDR407C NOP2P40991 618 aaKnown RBP5.04□□□□□ -1.6
TRS120YDR407C POL5P39985 1022 aaKnown RBP5.03□□□□□ -1.6
TRS120YDR407C YRF1-4O13559 1382 aa5.03□□□□□ -1.6
TRS120YDR407C CFT1Q06632 1357 aaKnown RBP5.02□□□□□ -1.61
TRS120YDR407C YRF1-3P0CX14 1859 aa5.02□□□□□ -1.61
TRS120YDR407C YRF1-7P0CX15 1859 aa5.02□□□□□ -1.61
TRS120YDR407C YRF1-6P53819 1859 aa5.02□□□□□ -1.61
TRS120YDR407C RIM15P43565 1770 aa4.99□□□□□ -1.61
TRS120YDR407C TFA1P36100 482 aa4.97□□□□□ -1.61
TRS120YDR407C RTT106P40161 455 aa4.97□□□□□ -1.61
TRS120YDR407C PSK1P31374 1356 aa4.95□□□□□ -1.62
TRS120YDR407C RPP0P05317 312 aaKnown RBP4.95□□□□□ -1.62
TRS120YDR407C BFR2Q06631 534 aaKnown RBP4.93□□□□□ -1.62
TRS120YDR407C NST1P53935 1240 aa4.92□□□□□ -1.62
TRS120YDR407C SIR4P11978 1358 aa4.92□□□□□ -1.62
TRS120YDR407C BUD21Q08492 214 aaPredicted RBP4.92□□□□□ -1.62
TRS120YDR407C FAS2P19097 1887 aaKnown RBP4.92□□□□□ -1.62
TRS120YDR407C YIR014WP40570 242 aa4.92□□□□□ -1.62
TRS120YDR407C AUS1Q08409 1394 aa4.91□□□□□ -1.62
TRS120YDR407C YAP3P38749 330 aa4.9□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms