RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W DOP1Q03921 1698 aa3.95□□□□□ -1.78
SWR1YDR334W LTE1P07866 1435 aa3.95□□□□□ -1.78
SWR1YDR334W SSP1P38871 571 aa3.95□□□□□ -1.78
SWR1YDR334W MLP2P40457 1679 aa3.93□□□□□ -1.78
SWR1YDR334W YOR093CQ12275 1648 aa3.92□□□□□ -1.78
SWR1YDR334W OXP1P28273 1286 aa3.91□□□□□ -1.78
SWR1YDR334W YKR023WP36119 530 aaKnown RBP3.91□□□□□ -1.78
SWR1YDR334W CHC1P22137 1653 aaKnown RBP3.91□□□□□ -1.78
SWR1YDR334W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
SWR1YDR334W ECM5Q03214 1411 aa3.9□□□□□ -1.79
SWR1YDR334W TSR3Q12094 313 aaKnown RBP3.89□□□□□ -1.79
SWR1YDR334W SAS10Q12136 610 aaPredicted RBP3.89□□□□□ -1.79
SWR1YDR334W PDR12Q02785 1511 aa3.87□□□□□ -1.79
SWR1YDR334W SCT1P32784 759 aa3.87□□□□□ -1.79
SWR1YDR334W LEO1P38439 464 aa3.85□□□□□ -1.79
SWR1YDR334W MRPL32P25348 183 aa3.85□□□□□ -1.79
SWR1YDR334W TFC8Q12308 588 aa3.85□□□□□ -1.79
SWR1YDR334W MGA2P40578 1113 aa3.84□□□□□ -1.79
SWR1YDR334W SNT2P53127 1403 aa3.84□□□□□ -1.8
SWR1YDR334W DMA1P38823 416 aa3.83□□□□□ -1.8
SWR1YDR334W YLR271WQ06152 274 aa3.83□□□□□ -1.8
SWR1YDR334W RSM7P47150 247 aa3.83□□□□□ -1.8
SWR1YDR334W PAN1P32521 1480 aa3.82□□□□□ -1.8
SWR1YDR334W LEU3P08638 886 aa3.82□□□□□ -1.8
SWR1YDR334W CHD1P32657 1468 aa3.8□□□□□ -1.8
SWR1YDR334W YIL055CP40523 627 aaKnown RBP3.8□□□□□ -1.8
SWR1YDR334W TAF2P23255 1407 aa3.8□□□□□ -1.8
SWR1YDR334W SSN2P38931 1420 aa3.8□□□□□ -1.8
SWR1YDR334W PSD2P53037 1138 aaKnown RBP3.8□□□□□ -1.8
SWR1YDR334W PTP3P40048 928 aa3.8□□□□□ -1.8
SWR1YDR334W HAA1Q12753 694 aaKnown RBP3.79□□□□□ -1.8
SWR1YDR334W PDR10P51533 1564 aa3.79□□□□□ -1.8
SWR1YDR334W POL1P13382 1468 aa3.79□□□□□ -1.8
SWR1YDR334W NOP53Q12080 455 aaKnown RBP3.79□□□□□ -1.8
SWR1YDR334W TRM3Q07527 1436 aa3.79□□□□□ -1.8
SWR1YDR334W SMC4Q12267 1418 aa3.78□□□□□ -1.8
SWR1YDR334W TY3B-GQ99315 1547 aa3.78□□□□□ -1.8
SWR1YDR334W BUD3P25558 1636 aa3.77□□□□□ -1.81
SWR1YDR334W TOP2P06786 1428 aaKnown RBP3.77□□□□□ -1.81
SWR1YDR334W PRY3P47033 881 aa3.76□□□□□ -1.81
SWR1YDR334W YPR148CQ06523 435 aa3.76□□□□□ -1.81
SWR1YDR334W VPS15P22219 1454 aa3.76□□□□□ -1.81
SWR1YDR334W TAF7Q05021 590 aa3.76□□□□□ -1.81
SWR1YDR334W YOR1P53049 1477 aa3.76□□□□□ -1.81
SWR1YDR334W PDR15Q04182 1529 aaKnown RBP3.76□□□□□ -1.81
SWR1YDR334W IFH1P39520 1085 aa3.75□□□□□ -1.81
SWR1YDR334W NUP170P38181 1502 aa3.75□□□□□ -1.81
SWR1YDR334W DNF3Q12674 1656 aa3.75□□□□□ -1.81
SWR1YDR334W TY1B-NL2Q99337 1749 aaKnown RBP3.74□□□□□ -1.81
SWR1YDR334W UBP10P53874 792 aaPredicted RBP3.74□□□□□ -1.81
SWR1YDR334W GDB1Q06625 1536 aa3.74□□□□□ -1.81
SWR1YDR334W ULS1Q08562 1619 aa3.74□□□□□ -1.81
SWR1YDR334W SNQ2P32568 1501 aaKnown RBP3.74□□□□□ -1.81
SWR1YDR334W YCK3P39962 524 aa3.74□□□□□ -1.81
SWR1YDR334W YRF1-2P40105 1681 aa3.74□□□□□ -1.81
SWR1YDR334W GEA2P39993 1459 aaKnown RBP3.73□□□□□ -1.81
SWR1YDR334W AI2P03876 854 aa3.73□□□□□ -1.81
SWR1YDR334W BBC1P47068 1157 aa3.73□□□□□ -1.81
SWR1YDR334W NSR1P27476 414 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SWR1YDR334W MYO4P32492 1471 aa3.72□□□□□ -1.81
SWR1YDR334W CDC27P38042 758 aa3.72□□□□□ -1.81
SWR1YDR334W ARO1P08566 1588 aaKnown RBP3.72□□□□□ -1.81
SWR1YDR334W CKB1P43639 278 aa3.69□□□□□ -1.82
SWR1YDR334W BCH2P36122 765 aa3.69□□□□□ -1.82
SWR1YDR334W MMS22Q06164 1454 aa3.68□□□□□ -1.82
SWR1YDR334W YAH1Q12184 172 aaKnown RBP3.68□□□□□ -1.82
SWR1YDR334W VTH1P40438 1549 aa3.68□□□□□ -1.82
SWR1YDR334W VTH2P40890 1549 aa3.68□□□□□ -1.82
SWR1YDR334W HOP09932 586 aa3.67□□□□□ -1.82
SWR1YDR334W UFD4P33202 1483 aa3.67□□□□□ -1.82
SWR1YDR334W YBT1P32386 1661 aa3.67□□□□□ -1.82
SWR1YDR334W MAK11P20484 414 aaKnown RBP3.67□□□□□ -1.82
SWR1YDR334W CST9Q06032 482 aa3.66□□□□□ -1.82
SWR1YDR334W EPS1P40557 701 aa3.66□□□□□ -1.82
SWR1YDR334W RTG3P38165 486 aa3.65□□□□□ -1.83
SWR1YDR334W RPN1P38764 993 aaKnown RBP3.64□□□□□ -1.83
SWR1YDR334W STU1P38198 1513 aa3.64□□□□□ -1.83
SWR1YDR334W NUP188P52593 1655 aaKnown RBP3.64□□□□□ -1.83
SWR1YDR334W TRM732Q03496 1420 aa3.64□□□□□ -1.83
SWR1YDR334W YGL015CP33199 130 aa3.63□□□□□ -1.83
SWR1YDR334W RAM2P29703 316 aa3.63□□□□□ -1.83
SWR1YDR334W VMR1P38735 1592 aa3.63□□□□□ -1.83
SWR1YDR334W BDF1P35817 686 aa3.63□□□□□ -1.83
SWR1YDR334W DSF2P38213 736 aa3.61□□□□□ -1.83
SWR1YDR334W SET1P38827 1080 aaKnown RBP3.61□□□□□ -1.83
SWR1YDR334W IQG1Q12280 1495 aa3.6□□□□□ -1.83
SWR1YDR334W MAK21Q12176 1025 aaKnown RBP3.6□□□□□ -1.83
SWR1YDR334W TGL3P40308 642 aa3.59□□□□□ -1.83
SWR1YDR334W NUP159P40477 1460 aa3.59□□□□□ -1.84
SWR1YDR334W PSH1Q12161 406 aa3.58□□□□□ -1.84
SWR1YDR334W DCD1P06773 312 aa3.58□□□□□ -1.84
SWR1YDR334W VPS29P38759 282 aa3.58□□□□□ -1.84
SWR1YDR334W YMR1P47147 688 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SWR1YDR334W YNR021WP53723 404 aaKnown RBP3.57□□□□□ -1.84
SWR1YDR334W AIM7Q12156 149 aa3.57□□□□□ -1.84
SWR1YDR334W IML1P47170 1584 aa3.56□□□□□ -1.84
SWR1YDR334W USO1P25386 1790 aa3.56□□□□□ -1.84
SWR1YDR334W MST1P07236 462 aa3.55□□□□□ -1.84
SWR1YDR334W MRM1P25270 412 aa3.55□□□□□ -1.84
SWR1YDR334W MIF2P35201 549 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms