RNA–Protein interactions for RNA: YDR239C

YDR239C, Transcript of Protein of unknown function, yeast

Gene YDR239C, Length 2,364 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR239C	YDR239C	DCW1	P36091	449 aa		4.53	□□□□□ -1.68
YDR239C	YDR239C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
YDR239C	YDR239C	VPS29	P38759	282 aa		4.51	□□□□□ -1.69
YDR239C	YDR239C	YEL023C	P39992	682 aa		4.49	□□□□□ -1.69
YDR239C	YDR239C	STS1	P38637	319 aa		4.47	□□□□□ -1.69
YDR239C	YDR239C	RGA1	P39083	1007 aa		4.46	□□□□□ -1.7
YDR239C	YDR239C	PML39	Q03760	334 aa		4.44	□□□□□ -1.7
YDR239C	YDR239C	TFA1	P36100	482 aa		4.41	□□□□□ -1.7
YDR239C	YDR239C	SPT23	P35210	1082 aa		4.4	□□□□□ -1.71
YDR239C	YDR239C	PEX29	Q03370	554 aa		4.4	□□□□□ -1.71
YDR239C	YDR239C	RQC2	Q12532	1038 aa	Known RBP	4.4	□□□□□ -1.71
YDR239C	YDR239C	ARH1	P48360	493 aa		4.39	□□□□□ -1.71
YDR239C	YDR239C	SSP1	P38871	571 aa		4.38	□□□□□ -1.71
YDR239C	YDR239C	GRE2	Q12068	342 aa	Known RBP	4.38	□□□□□ -1.71
YDR239C	YDR239C	MGA2	P40578	1113 aa		4.36	□□□□□ -1.71
YDR239C	YDR239C	CST9	Q06032	482 aa		4.35	□□□□□ -1.71
YDR239C	YDR239C	YDR344C	Q05510	147 aa		4.34	□□□□□ -1.71
YDR239C	YDR239C	ATH1	P48016	1211 aa		4.33	□□□□□ -1.72
YDR239C	YDR239C	SRC1	Q03707	834 aa		4.32	□□□□□ -1.72
YDR239C	YDR239C	PTC2	P39966	464 aa	Known RBP	4.31	□□□□□ -1.72
YDR239C	YDR239C	HAP5	Q02516	242 aa		4.3	□□□□□ -1.72
YDR239C	YDR239C	RCR1	P38212	213 aa		4.29	□□□□□ -1.72
YDR239C	YDR239C	MID1	P41821	548 aa		4.29	□□□□□ -1.72
YDR239C	YDR239C	GUT1	P32190	709 aa		4.28	□□□□□ -1.72
YDR239C	YDR239C	BNI4	P53858	892 aa		4.27	□□□□□ -1.73
YDR239C	YDR239C	YML082W	Q04533	649 aa	Known RBP	4.27	□□□□□ -1.73
YDR239C	YDR239C	MIF2	P35201	549 aa		4.26	□□□□□ -1.73
YDR239C	YDR239C	TRK1	P12685	1235 aa		4.24	□□□□□ -1.73
YDR239C	YDR239C	RAS1	P01119	309 aa		4.21	□□□□□ -1.73
YDR239C	YDR239C	MPH3	P0CE00	602 aa		4.2	□□□□□ -1.74
YDR239C	YDR239C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
YDR239C	YDR239C	PTC3	P34221	468 aa	Known RBP	4.2	□□□□□ -1.74
YDR239C	YDR239C	AI4	P03878	556 aa		4.2	□□□□□ -1.74
YDR239C	YDR239C	GYP1	Q08484	637 aa		4.19	□□□□□ -1.74
YDR239C	YDR239C	YPL062W	Q02781	134 aa		4.17	□□□□□ -1.74
YDR239C	YDR239C	AMS1	P22855	1083 aa		4.16	□□□□□ -1.74
YDR239C	YDR239C	NMA111	P53920	997 aa		4.16	□□□□□ -1.74
YDR239C	YDR239C	MPC54	Q08550	464 aa		4.16	□□□□□ -1.74
YDR239C	YDR239C	TAF7	Q05021	590 aa		4.14	□□□□□ -1.75
YDR239C	YDR239C	MAK11	P20484	414 aa	Known RBP	4.14	□□□□□ -1.75
YDR239C	YDR239C	NST1	P53935	1240 aa		4.13	□□□□□ -1.75
YDR239C	YDR239C	YEL077C	Q3E7X8	1277 aa		4.13	□□□□□ -1.75
YDR239C	YDR239C	EDS1	P38073	919 aa		4.12	□□□□□ -1.75
YDR239C	YDR239C	DPL1	Q05567	589 aa		4.12	□□□□□ -1.75
YDR239C	YDR239C	SOL3	P38858	249 aa		4.11	□□□□□ -1.75
YDR239C	YDR239C	GCR2	Q01722	534 aa		4.11	□□□□□ -1.75
YDR239C	YDR239C	GAR1	P28007	205 aa	Known RBP	4.1	□□□□□ -1.75
YDR239C	YDR239C	SAS4	Q04003	481 aa		4.1	□□□□□ -1.75
YDR239C	YDR239C	COQ8	P27697	501 aa		4.09	□□□□□ -1.76
YDR239C	YDR239C	ISU2	Q12056	156 aa		4.09	□□□□□ -1.76
YDR239C	YDR239C	ILV3	P39522	585 aa	Known RBP	4.08	□□□□□ -1.76
YDR239C	YDR239C	MRF1	P30775	413 aa	Predicted RBP	4.07	□□□□□ -1.76
YDR239C	YDR239C	YGR273C	P53329	174 aa		4.07	□□□□□ -1.76
YDR239C	YDR239C	SLI15	P38283	698 aa		4.05	□□□□□ -1.76
YDR239C	YDR239C	BRE2	P43132	505 aa		4.04	□□□□□ -1.76
YDR239C	YDR239C	YPR015C	Q12531	247 aa		4.04	□□□□□ -1.76
YDR239C	YDR239C	RAM2	P29703	316 aa		4.02	□□□□□ -1.77
YDR239C	YDR239C	NOP53	Q12080	455 aa	Known RBP	4.02	□□□□□ -1.77
YDR239C	YDR239C	RPP1B	P10622	106 aa	Known RBP	4.01	□□□□□ -1.77
YDR239C	YDR239C	RAM1	P22007	431 aa		4	□□□□□ -1.77
YDR239C	YDR239C	ERG12	P07277	443 aa		3.99	□□□□□ -1.77
YDR239C	YDR239C	PDR1	P12383	1068 aa		3.96	□□□□□ -1.78
YDR239C	YDR239C	CDC73	Q06697	393 aa		3.95	□□□□□ -1.78
YDR239C	YDR239C	SDH2	P21801	266 aa		3.94	□□□□□ -1.78
YDR239C	YDR239C	KEX1	P09620	729 aa		3.94	□□□□□ -1.78
YDR239C	YDR239C	PRT1	P06103	763 aa	Known RBP	3.93	□□□□□ -1.78
YDR239C	YDR239C	PEX21	P50091	288 aa		3.91	□□□□□ -1.78
YDR239C	YDR239C	URN1	Q06525	465 aa	Known RBP	3.9	□□□□□ -1.78
YDR239C	YDR239C	AIR1	P40507	360 aa	Known RBP	3.89	□□□□□ -1.79
YDR239C	YDR239C	ENV9	Q08651	330 aa		3.89	□□□□□ -1.79
YDR239C	YDR239C	CDC4	P07834	779 aa		3.88	□□□□□ -1.79
YDR239C	YDR239C	MET22	P32179	357 aa		3.88	□□□□□ -1.79
YDR239C	YDR239C	SPT16	P32558	1035 aa	Known RBP	3.88	□□□□□ -1.79
YDR239C	YDR239C	NPL4	P33755	580 aa		3.88	□□□□□ -1.79
YDR239C	YDR239C	BUD20	Q08004	166 aa	Predicted RBP	3.87	□□□□□ -1.79
YDR239C	YDR239C	RAD54	P32863	898 aa		3.87	□□□□□ -1.79
YDR239C	YDR239C	YDR444W	Q04093	687 aa		3.85	□□□□□ -1.79
YDR239C	YDR239C	YRR1	Q12172	810 aa		3.85	□□□□□ -1.79
YDR239C	YDR239C	MTC5	Q03897	1148 aa		3.85	□□□□□ -1.79
YDR239C	YDR239C	FRK1	Q03002	865 aa	Predicted RBP	3.84	□□□□□ -1.79
YDR239C	YDR239C	CST6	P40535	587 aa		3.84	□□□□□ -1.79
YDR239C	YDR239C	CLA4	P48562	842 aa		3.84	□□□□□ -1.79
YDR239C	YDR239C	PAT1	P25644	796 aa	Known RBP	3.83	□□□□□ -1.8
YDR239C	YDR239C	KIC1	P38692	1080 aa		3.83	□□□□□ -1.8
YDR239C	YDR239C	VHR2	P40041	505 aa		3.83	□□□□□ -1.8
YDR239C	YDR239C	GCD11	P32481	527 aa	Known RBP	3.82	□□□□□ -1.8
YDR239C	YDR239C	IFH1	P39520	1085 aa		3.82	□□□□□ -1.8
YDR239C	YDR239C	LAM6	Q08001	693 aa		3.82	□□□□□ -1.8
YDR239C	YDR239C	YLR326W	Q06170	240 aa	Known RBP	3.81	□□□□□ -1.8
YDR239C	YDR239C	ISM1	P48526	1002 aa		3.8	□□□□□ -1.8
YDR239C	YDR239C	NUD1	P32336	851 aa		3.8	□□□□□ -1.8
YDR239C	YDR239C	HST3	P53687	447 aa		3.8	□□□□□ -1.8
YDR239C	YDR239C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.79	□□□□□ -1.8	not detected
YDR239C	YDR239C	STR2	P47164	639 aa		3.79	□□□□□ -1.8
YDR239C	YDR239C	HED1	Q03937	162 aa		3.79	□□□□□ -1.8
YDR239C	YDR239C	TFB4	Q12004	338 aa		3.79	□□□□□ -1.8
YDR239C	YDR239C	UBP14	P38237	781 aa	Known RBP	3.78	□□□□□ -1.8
YDR239C	YDR239C	LCB5	Q06147	687 aa	Known RBP	3.78	□□□□□ -1.8
YDR239C	YDR239C	CSC1	Q06538	782 aa		3.78	□□□□□ -1.8
YDR239C	YDR239C	TUM1	Q08686	304 aa	Known RBP	3.76	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms