RNA–Protein interactions for RNA: YDR113C

PDS1, Transcript of Securin, yeastyeast

Gene PDS1, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDS1YDR113C YDL129WQ07555 291 aa9.22□□□□□ -0.93
PDS1YDR113C MAK11P20484 414 aaKnown RBP9.2□□□□□ -0.94
PDS1YDR113C SAP30P38429 201 aa9.2□□□□□ -0.94
PDS1YDR113C GRE2Q12068 342 aaKnown RBP9.18□□□□□ -0.94
PDS1YDR113C RAM2P29703 316 aa9.17□□□□□ -0.94
PDS1YDR113C MIF2P35201 549 aa9.14□□□□□ -0.95
PDS1YDR113C CHL1P22516 861 aaPredicted RBP9.12□□□□□ -0.95
PDS1YDR113C PTC3P34221 468 aaKnown RBP9.11□□□□□ -0.95
PDS1YDR113C GUT1P32190 709 aa9.1□□□□□ -0.95
PDS1YDR113C EDS1P38073 919 aa9.1□□□□□ -0.95
PDS1YDR113C ATH1P48016 1211 aa9.1□□□□□ -0.95
PDS1YDR113C PRE3P38624 215 aa9.09□□□□□ -0.95
PDS1YDR113C COQ8P27697 501 aa9.05□□□□□ -0.96
PDS1YDR113C BCK2P33306 851 aa9.05□□□□□ -0.96
PDS1YDR113C PML39Q03760 334 aa9.03□□□□□ -0.96
PDS1YDR113C NST1P53935 1240 aa9.01□□□□□ -0.97
PDS1YDR113C NOP53Q12080 455 aaKnown RBP8.99□□□□□ -0.97
PDS1YDR113C SOL3P38858 249 aa8.97□□□□□ -0.97
PDS1YDR113C AI4P03878 556 aa8.93□□□□□ -0.98
PDS1YDR113C MPH3P0CE00 602 aa8.93□□□□□ -0.98
PDS1YDR113C ELP4Q02884 456 aaKnown RBP8.93□□□□□ -0.98
PDS1YDR113C YDR344CQ05510 147 aa8.93□□□□□ -0.98
PDS1YDR113C ARH1P48360 493 aa8.91□□□□□ -0.98
PDS1YDR113C MID1P41821 548 aa8.9□□□□□ -0.98
PDS1YDR113C VRP1P37370 817 aa8.88□□□□□ -0.99
PDS1YDR113C XDJ1P39102 459 aa8.87□□□□□ -0.99
PDS1YDR113C YGR273CP53329 174 aa8.84□□□□□ -0.99
PDS1YDR113C ILV3P39522 585 aaKnown RBP8.83□□□□□ -1
PDS1YDR113C PEX29Q03370 554 aa8.83□□□□□ -1
PDS1YDR113C SPT23P35210 1082 aa8.81□□□□□ -1
PDS1YDR113C HAP5Q02516 242 aa8.78□□□□□ -1
PDS1YDR113C BNI4P53858 892 aa8.74□□□□□ -1.01
PDS1YDR113C MPC54Q08550 464 aa8.73□□□□□ -1.01
PDS1YDR113C SLI15P38283 698 aa8.71□□□□□ -1.02
PDS1YDR113C YML082WQ04533 649 aaKnown RBP8.71□□□□□ -1.02
PDS1YDR113C SET1P38827 1080 aaKnown RBP8.68□□□□□ -1.02
PDS1YDR113C PTC2P39966 464 aaKnown RBP8.68□□□□□ -1.02
PDS1YDR113C NMA111P53920 997 aa8.68□□□□□ -1.02
PDS1YDR113C DPL1Q05567 589 aa8.67□□□□□ -1.02
PDS1YDR113C DPS1P04802 557 aaKnown RBP8.65□□□□□ -1.02
PDS1YDR113C KEX1P09620 729 aa8.65□□□□□ -1.02
PDS1YDR113C UBP14P38237 781 aaKnown RBP8.59□□□□□ -1.03
PDS1YDR113C ISU2Q12056 156 aa8.59□□□□□ -1.03
PDS1YDR113C YLR326WQ06170 240 aaKnown RBP8.57□□□□□ -1.04
PDS1YDR113C VHR2P40041 505 aa8.53□□□□□ -1.04
PDS1YDR113C CDC73Q06697 393 aa8.53□□□□□ -1.04
PDS1YDR113C RAM1P22007 431 aa8.51□□□□□ -1.05
PDS1YDR113C PCS60P38137 543 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
PDS1YDR113C IFH1P39520 1085 aa8.5□□□□□ -1.05
PDS1YDR113C YPR015CQ12531 247 aa8.5□□□□□ -1.05
PDS1YDR113C RAD54P32863 898 aa8.49□□□□□ -1.05
PDS1YDR113C RPP1BP10622 106 aaKnown RBP8.47□□□□□ -1.05
PDS1YDR113C DMA1P38823 416 aa8.43□□□□□ -1.06
PDS1YDR113C SRC1Q03707 834 aa8.43□□□□□ -1.06
PDS1YDR113C YDR090CQ03193 310 aa8.42□□□□□ -1.06
PDS1YDR113C PDR1P12383 1068 aa8.41□□□□□ -1.06
PDS1YDR113C GYP1Q08484 637 aa8.41□□□□□ -1.06
PDS1YDR113C KIC1P38692 1080 aa8.39□□□□□ -1.07
PDS1YDR113C SAS4Q04003 481 aa8.39□□□□□ -1.07
PDS1YDR113C YPR148CQ06523 435 aa8.39□□□□□ -1.07
PDS1YDR113C RAS1P01119 309 aa8.38□□□□□ -1.07
PDS1YDR113C REF2P42073 533 aaPredicted RBP8.37□□□□□ -1.07
PDS1YDR113C GAP1P19145 602 aaPredicted RBP8.33□□□□□ -1.08
PDS1YDR113C AMS1P22855 1083 aa8.33□□□□□ -1.08
PDS1YDR113C PEX21P50091 288 aa8.32□□□□□ -1.08
PDS1YDR113C CSC1Q06538 782 aa8.32□□□□□ -1.08
PDS1YDR113C TFB4Q12004 338 aa8.31□□□□□ -1.08
PDS1YDR113C YRR1Q12172 810 aa8.3□□□□□ -1.08
PDS1YDR113C SDH2P21801 266 aa8.28□□□□□ -1.08
PDS1YDR113C BUD20Q08004 166 aaPredicted RBP8.28□□□□□ -1.08
PDS1YDR113C MRF1P30775 413 aaPredicted RBP8.27□□□□□ -1.09
PDS1YDR113C MAK21Q12176 1025 aaKnown RBP8.27□□□□□ -1.09
PDS1YDR113C RQC2Q12532 1038 aaKnown RBP8.27□□□□□ -1.09
PDS1YDR113C COX6P00427 148 aa8.25□□□□□ -1.09
PDS1YDR113C PRT1P06103 763 aaKnown RBP8.25□□□□□ -1.09
PDS1YDR113C VPS70P47161 811 aa8.25□□□□□ -1.09
PDS1YDR113C YEL077CQ3E7X8 1277 aa8.25□□□□□ -1.09
PDS1YDR113C ORC6P38826 435 aa8.24□□□□□ -1.09
PDS1YDR113C TUM1Q08686 304 aaKnown RBP8.24□□□□□ -1.09
PDS1YDR113C STR2P47164 639 aa8.23□□□□□ -1.09
PDS1YDR113C TRK1P12685 1235 aa8.22□□□□□ -1.09
PDS1YDR113C ISM1P48526 1002 aa8.22□□□□□ -1.09
PDS1YDR113C NUD1P32336 851 aa8.21□□□□□ -1.1
PDS1YDR113C NPL4P33755 580 aa8.18□□□□□ -1.1
PDS1YDR113C MVP1P40959 511 aaKnown RBP8.17□□□□□ -1.1
PDS1YDR113C SAS10Q12136 610 aaPredicted RBP8.17□□□□□ -1.1
PDS1YDR113C ERG12P07277 443 aa8.14□□□□□ -1.11
PDS1YDR113C RGR1P19263 1082 aa8.12□□□□□ -1.11
PDS1YDR113C GCD11P32481 527 aaKnown RBP8.12□□□□□ -1.11
PDS1YDR113C YPR109WQ06104 294 aa8.11□□□□□ -1.11
PDS1YDR113C TY1A-DR4O74302 440 aa8.1□□□□□ -1.11
PDS1YDR113C TY1A-HP0C2I4 478 aaKnown RBP8.1□□□□□ -1.11
PDS1YDR113C TY1A-AP0CX57 440 aa8.1□□□□□ -1.11
PDS1YDR113C TY1A-PR1P0CX58 440 aa8.1□□□□□ -1.11
PDS1YDR113C TY1A-ORP0CX59 440 aa8.1□□□□□ -1.11
PDS1YDR113C TY1A-PR2P0CX60 440 aa8.1□□□□□ -1.11
PDS1YDR113C TY1A-DR5P0CX65 440 aa8.1□□□□□ -1.11
PDS1YDR113C TY1A-ER2P0CX66 440 aa8.1□□□□□ -1.11
PDS1YDR113C TY1A-GR3P0CX67 440 aa8.1□□□□□ -1.11
PDS1YDR113C TY1A-LR1P0CX68 440 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms