RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C DNF1P32660 1571 aa5.93□□□□□ -1.46
BRE4YDL231C PAN1P32521 1480 aa5.91□□□□□ -1.46
BRE4YDL231C MLP2P40457 1679 aa5.91□□□□□ -1.46
BRE4YDL231C YRF1-1P0CX20 1796 aa5.89□□□□□ -1.47
BRE4YDL231C YRF1-5P0CX21 1796 aa5.89□□□□□ -1.47
BRE4YDL231C YRF1-8P0CX22 1796 aa5.89□□□□□ -1.47
BRE4YDL231C AVT3P36062 692 aa5.89□□□□□ -1.47
BRE4YDL231C ULS1Q08562 1619 aa5.88□□□□□ -1.47
BRE4YDL231C VTH1P40438 1549 aa5.87□□□□□ -1.47
BRE4YDL231C VTH2P40890 1549 aa5.87□□□□□ -1.47
BRE4YDL231C SPP41P38904 1435 aa5.86□□□□□ -1.47
BRE4YDL231C TRM732Q03496 1420 aa5.86□□□□□ -1.47
BRE4YDL231C SNQ2P32568 1501 aaKnown RBP5.86□□□□□ -1.47
BRE4YDL231C LEU3P08638 886 aa5.84□□□□□ -1.47
BRE4YDL231C MET5P47169 1442 aa5.84□□□□□ -1.47
BRE4YDL231C IRC20Q06554 1556 aa5.84□□□□□ -1.47
BRE4YDL231C SNT2P53127 1403 aa5.83□□□□□ -1.48
BRE4YDL231C BUD21Q08492 214 aaPredicted RBP5.82□□□□□ -1.48
BRE4YDL231C GEA1P47102 1408 aaPredicted RBP5.8□□□□□ -1.48
BRE4YDL231C MET10P39692 1035 aa5.8□□□□□ -1.48
BRE4YDL231C SSM4P40318 1319 aa5.8□□□□□ -1.48
BRE4YDL231C TSC11P40061 1430 aa5.8□□□□□ -1.48
BRE4YDL231C IKI3Q06706 1349 aaKnown RBP5.78□□□□□ -1.48
BRE4YDL231C PDR12Q02785 1511 aa5.78□□□□□ -1.48
BRE4YDL231C YBT1P32386 1661 aa5.78□□□□□ -1.48
BRE4YDL231C PDR15Q04182 1529 aaKnown RBP5.78□□□□□ -1.48
BRE4YDL231C NOP7P53261 605 aaKnown RBP5.78□□□□□ -1.48
BRE4YDL231C SPO14P36126 1683 aa5.76□□□□□ -1.49
BRE4YDL231C NUP170P38181 1502 aa5.75□□□□□ -1.49
BRE4YDL231C BNI1P41832 1953 aa5.73□□□□□ -1.49
BRE4YDL231C TY3B-GQ99315 1547 aa5.73□□□□□ -1.49
BRE4YDL231C PAF1P38351 445 aa5.73□□□□□ -1.49
BRE4YDL231C GDB1Q06625 1536 aa5.73□□□□□ -1.49
BRE4YDL231C NUP157P40064 1391 aaKnown RBP5.72□□□□□ -1.49
BRE4YDL231C NUP159P40477 1460 aa5.72□□□□□ -1.49
BRE4YDL231C POL5P39985 1022 aaKnown RBP5.72□□□□□ -1.49
BRE4YDL231C GEA2P39993 1459 aaKnown RBP5.71□□□□□ -1.5
BRE4YDL231C VPS15P22219 1454 aa5.7□□□□□ -1.5
BRE4YDL231C LTE1P07866 1435 aa5.69□□□□□ -1.5
BRE4YDL231C DOP1Q03921 1698 aa5.68□□□□□ -1.5
BRE4YDL231C PDR10P51533 1564 aa5.68□□□□□ -1.5
BRE4YDL231C CHC1P22137 1653 aaKnown RBP5.66□□□□□ -1.5
BRE4YDL231C TAF5P38129 798 aa5.66□□□□□ -1.5
BRE4YDL231C BUD3P25558 1636 aa5.65□□□□□ -1.5
BRE4YDL231C ITT1Q04638 464 aa5.65□□□□□ -1.51
BRE4YDL231C ABP1P15891 592 aaKnown RBP5.64□□□□□ -1.51
BRE4YDL231C ARO1P08566 1588 aaKnown RBP5.62□□□□□ -1.51
BRE4YDL231C CAT8P39113 1433 aa5.62□□□□□ -1.51
BRE4YDL231C BNR1P40450 1375 aa5.61□□□□□ -1.51
BRE4YDL231C SRB8P25648 1427 aa5.61□□□□□ -1.51
BRE4YDL231C KIP3P53086 805 aaKnown RBP5.6□□□□□ -1.51
BRE4YDL231C DRS2P39524 1355 aa5.59□□□□□ -1.51
BRE4YDL231C TRM3Q07527 1436 aa5.58□□□□□ -1.52
BRE4YDL231C DNF2Q12675 1612 aa5.58□□□□□ -1.52
BRE4YDL231C IQG1Q12280 1495 aa5.57□□□□□ -1.52
BRE4YDL231C SPT7P35177 1332 aa5.57□□□□□ -1.52
BRE4YDL231C TYS1P36421 394 aaKnown RBP5.57□□□□□ -1.52
BRE4YDL231C SEC7P11075 2009 aaKnown RBP5.56□□□□□ -1.52
BRE4YDL231C FUN12P39730 1002 aaKnown RBP5.56□□□□□ -1.52
BRE4YDL231C PSD2P53037 1138 aaKnown RBP5.56□□□□□ -1.52
BRE4YDL231C NSR1P27476 414 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
BRE4YDL231C MRX12P47084 519 aa5.54□□□□□ -1.52
BRE4YDL231C LEO1P38439 464 aa5.53□□□□□ -1.52
BRE4YDL231C CAB1Q04430 367 aa5.53□□□□□ -1.52
BRE4YDL231C MIF2P35201 549 aa5.53□□□□□ -1.52
BRE4YDL231C ISW2Q08773 1120 aa5.53□□□□□ -1.52
BRE4YDL231C TAF8Q03750 510 aa5.53□□□□□ -1.52
BRE4YDL231C HAP1P0CE41 1502 aa5.52□□□□□ -1.53
BRE4YDL231C DMA1P38823 416 aa5.51□□□□□ -1.53
BRE4YDL231C YOR093CQ12275 1648 aa5.5□□□□□ -1.53
BRE4YDL231C CHZ1P40019 153 aaPredicted RBP5.5□□□□□ -1.53
BRE4YDL231C PDS5Q04264 1277 aa5.5□□□□□ -1.53
BRE4YDL231C URN1Q06525 465 aaKnown RBP5.5□□□□□ -1.53
BRE4YDL231C GCN2P15442 1659 aa5.5□□□□□ -1.53
BRE4YDL231C YSP2Q06681 1438 aa5.5□□□□□ -1.53
BRE4YDL231C RIA1P53893 1110 aa5.5□□□□□ -1.53
BRE4YDL231C MMS1Q06211 1407 aa5.5□□□□□ -1.53
BRE4YDL231C SPE2P21182 396 aa5.49□□□□□ -1.53
BRE4YDL231C ESL2P36168 1195 aa5.49□□□□□ -1.53
BRE4YDL231C IPL1P38991 367 aa5.49□□□□□ -1.53
BRE4YDL231C NAP1P25293 417 aaKnown RBP5.48□□□□□ -1.53
BRE4YDL231C YAP3P38749 330 aa5.48□□□□□ -1.53
BRE4YDL231C PDR5P33302 1511 aaKnown RBP5.47□□□□□ -1.53
BRE4YDL231C NUP188P52593 1655 aaKnown RBP5.47□□□□□ -1.53
BRE4YDL231C PAP2P53632 584 aaKnown RBP5.46□□□□□ -1.53
BRE4YDL231C RPG1P38249 964 aaKnown RBP5.46□□□□□ -1.54
BRE4YDL231C RTG3P38165 486 aa5.45□□□□□ -1.54
BRE4YDL231C FAP1P53971 965 aa5.45□□□□□ -1.54
BRE4YDL231C RCM1P53972 490 aa5.45□□□□□ -1.54
BRE4YDL231C NST1P53935 1240 aa5.44□□□□□ -1.54
BRE4YDL231C KRE5P22023 1365 aa5.44□□□□□ -1.54
BRE4YDL231C VMR1P38735 1592 aa5.44□□□□□ -1.54
BRE4YDL231C DNF3Q12674 1656 aa5.43□□□□□ -1.54
BRE4YDL231C RAD9P14737 1309 aa5.43□□□□□ -1.54
BRE4YDL231C ENP1P38333 483 aaKnown RBP5.43□□□□□ -1.54
BRE4YDL231C ALD4P46367 519 aaKnown RBP5.41□□□□□ -1.54
BRE4YDL231C NOP2P40991 618 aaKnown RBP5.4□□□□□ -1.54
BRE4YDL231C GAS4Q08271 471 aa5.4□□□□□ -1.55
BRE4YDL231C SEC3P33332 1336 aaKnown RBP5.39□□□□□ -1.55
BRE4YDL231C PDR11P40550 1411 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms