RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C CHL1P22516 861 aaPredicted RBP7.95□□□□□ -1.14
RRP42YDL111C ABP1P15891 592 aaKnown RBP7.94□□□□□ -1.14
RRP42YDL111C PRE3P38624 215 aa7.92□□□□□ -1.14
RRP42YDL111C YEL023CP39992 682 aa7.92□□□□□ -1.14
RRP42YDL111C PTC4P38089 393 aa7.88□□□□□ -1.15
RRP42YDL111C VRP1P37370 817 aa7.81□□□□□ -1.16
RRP42YDL111C YDR344CQ05510 147 aa7.81□□□□□ -1.16
RRP42YDL111C ELP4Q02884 456 aaKnown RBP7.79□□□□□ -1.16
RRP42YDL111C PML39Q03760 334 aa7.79□□□□□ -1.16
RRP42YDL111C GRE2Q12068 342 aaKnown RBP7.77□□□□□ -1.17
RRP42YDL111C XDJ1P39102 459 aa7.74□□□□□ -1.17
RRP42YDL111C MIF2P35201 549 aa7.73□□□□□ -1.17
RRP42YDL111C ATH1P48016 1211 aa7.7□□□□□ -1.18
RRP42YDL111C DPS1P04802 557 aaKnown RBP7.69□□□□□ -1.18
RRP42YDL111C MID1P41821 548 aa7.66□□□□□ -1.18
RRP42YDL111C PEX29Q03370 554 aa7.64□□□□□ -1.19
RRP42YDL111C GUT1P32190 709 aa7.63□□□□□ -1.19
RRP42YDL111C PTC3P34221 468 aaKnown RBP7.63□□□□□ -1.19
RRP42YDL111C EDS1P38073 919 aa7.62□□□□□ -1.19
RRP42YDL111C ARH1P48360 493 aa7.61□□□□□ -1.19
RRP42YDL111C MAK11P20484 414 aaKnown RBP7.6□□□□□ -1.19
RRP42YDL111C RAM2P29703 316 aa7.56□□□□□ -1.2
RRP42YDL111C SPT23P35210 1082 aa7.55□□□□□ -1.2
RRP42YDL111C NST1P53935 1240 aa7.53□□□□□ -1.2
RRP42YDL111C COQ8P27697 501 aa7.52□□□□□ -1.21
RRP42YDL111C SOL3P38858 249 aa7.52□□□□□ -1.21
RRP42YDL111C HAP5Q02516 242 aa7.51□□□□□ -1.21
RRP42YDL111C MPH3P0CE00 602 aa7.49□□□□□ -1.21
RRP42YDL111C AI4P03878 556 aa7.48□□□□□ -1.21
RRP42YDL111C ILV3P39522 585 aaKnown RBP7.48□□□□□ -1.21
RRP42YDL111C PTC2P39966 464 aaKnown RBP7.46□□□□□ -1.22
RRP42YDL111C SRC1Q03707 834 aa7.45□□□□□ -1.22
RRP42YDL111C BNI4P53858 892 aa7.44□□□□□ -1.22
RRP42YDL111C MPC54Q08550 464 aa7.43□□□□□ -1.22
RRP42YDL111C NOP53Q12080 455 aaKnown RBP7.39□□□□□ -1.23
RRP42YDL111C YGR273CP53329 174 aa7.38□□□□□ -1.23
RRP42YDL111C YML082WQ04533 649 aaKnown RBP7.38□□□□□ -1.23
RRP42YDL111C NMA111P53920 997 aa7.37□□□□□ -1.23
RRP42YDL111C SLI15P38283 698 aa7.33□□□□□ -1.24
RRP42YDL111C RAS1P01119 309 aa7.32□□□□□ -1.24
RRP42YDL111C RQC2Q12532 1038 aaKnown RBP7.32□□□□□ -1.24
RRP42YDL111C DPL1Q05567 589 aa7.31□□□□□ -1.24
RRP42YDL111C RGA2Q06407 1009 aa7.3□□□□□ -1.24
RRP42YDL111C YPR015CQ12531 247 aa7.28□□□□□ -1.24
RRP42YDL111C RGA1P39083 1007 aa7.26□□□□□ -1.25
RRP42YDL111C GYP1Q08484 637 aa7.24□□□□□ -1.25
RRP42YDL111C KEX1P09620 729 aa7.2□□□□□ -1.26
RRP42YDL111C RAM1P22007 431 aa7.2□□□□□ -1.26
RRP42YDL111C CDC73Q06697 393 aa7.2□□□□□ -1.26
RRP42YDL111C ISU2Q12056 156 aa7.2□□□□□ -1.26
RRP42YDL111C AMS1P22855 1083 aa7.18□□□□□ -1.26
RRP42YDL111C TRK1P12685 1235 aa7.17□□□□□ -1.26
RRP42YDL111C PDR1P12383 1068 aa7.16□□□□□ -1.26
RRP42YDL111C SET1P38827 1080 aaKnown RBP7.14□□□□□ -1.27
RRP42YDL111C VHR2P40041 505 aa7.11□□□□□ -1.27
RRP42YDL111C SDH2P21801 266 aa7.09□□□□□ -1.27
RRP42YDL111C YLR326WQ06170 240 aaKnown RBP7.08□□□□□ -1.28
RRP42YDL111C YEL077CQ3E7X8 1277 aa7.07□□□□□ -1.28
RRP42YDL111C UBP14P38237 781 aaKnown RBP7.06□□□□□ -1.28
RRP42YDL111C SAS4Q04003 481 aa7.06□□□□□ -1.28
RRP42YDL111C RAD54P32863 898 aa7.04□□□□□ -1.28
RRP42YDL111C PCS60P38137 543 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
RRP42YDL111C RPP1BP10622 106 aaKnown RBP7.01□□□□□ -1.29
RRP42YDL111C IFH1P39520 1085 aa7□□□□□ -1.29
RRP42YDL111C MRF1P30775 413 aaPredicted RBP6.98□□□□□ -1.29
RRP42YDL111C PEX21P50091 288 aa6.97□□□□□ -1.29
RRP42YDL111C YRR1Q12172 810 aa6.97□□□□□ -1.29
RRP42YDL111C BUD20Q08004 166 aaPredicted RBP6.96□□□□□ -1.3
RRP42YDL111C PRT1P06103 763 aaKnown RBP6.94□□□□□ -1.3
RRP42YDL111C ERG12P07277 443 aa6.93□□□□□ -1.3
RRP42YDL111C KIC1P38692 1080 aa6.93□□□□□ -1.3
RRP42YDL111C AIR1P40507 360 aaKnown RBP6.93□□□□□ -1.3
RRP42YDL111C YPL062WQ02781 134 aa6.93□□□□□ -1.3
RRP42YDL111C YDR090CQ03193 310 aa6.93□□□□□ -1.3
RRP42YDL111C YPR148CQ06523 435 aa6.93□□□□□ -1.3
RRP42YDL111C GAR1P28007 205 aaKnown RBP6.92□□□□□ -1.3
RRP42YDL111C STR2P47164 639 aa6.92□□□□□ -1.3
RRP42YDL111C GBP2P25555 427 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
RRP42YDL111C BRE2P43132 505 aa6.91□□□□□ -1.3
RRP42YDL111C ISM1P48526 1002 aa6.9□□□□□ -1.3
RRP42YDL111C CLA4P48562 842 aa6.9□□□□□ -1.3
RRP42YDL111C NUD1P32336 851 aa6.88□□□□□ -1.31
RRP42YDL111C CST6P40535 587 aa6.88□□□□□ -1.31
RRP42YDL111C REF2P42073 533 aaPredicted RBP6.88□□□□□ -1.31
RRP42YDL111C TUM1Q08686 304 aaKnown RBP6.88□□□□□ -1.31
RRP42YDL111C GAP1P19145 602 aaPredicted RBP6.87□□□□□ -1.31
RRP42YDL111C NPL4P33755 580 aa6.85□□□□□ -1.31
RRP42YDL111C GCR2Q01722 534 aa6.85□□□□□ -1.31
RRP42YDL111C CSC1Q06538 782 aa6.85□□□□□ -1.31
RRP42YDL111C FRK1Q03002 865 aaPredicted RBP6.84□□□□□ -1.31
RRP42YDL111C TFB4Q12004 338 aa6.84□□□□□ -1.31
RRP42YDL111C GCD11P32481 527 aaKnown RBP6.83□□□□□ -1.32
RRP42YDL111C SPT16P32558 1035 aaKnown RBP6.83□□□□□ -1.32
RRP42YDL111C VPS70P47161 811 aa6.82□□□□□ -1.32
RRP42YDL111C ORC6P38826 435 aa6.8□□□□□ -1.32
RRP42YDL111C LAM6Q08001 693 aa6.8□□□□□ -1.32
RRP42YDL111C MAK21Q12176 1025 aaKnown RBP6.8□□□□□ -1.32
RRP42YDL111C TY1A-DR4O74302 440 aa6.78□□□□□ -1.32
RRP42YDL111C COX6P00427 148 aa6.78□□□□□ -1.32
RRP42YDL111C TY1A-HP0C2I4 478 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms