RNA–Protein interactions for RNA: YDL080C

THI3, Transcript of Regulatory protein that binds Pdc2p and Thi2p transcription factors, yeast

Gene THI3, Length 1,830 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THI3	YDL080C	ESC1	Q03661	1658 aa	Known RBP	12.04	□□□□□ -0.48
THI3	YDL080C	GEA1	P47102	1408 aa	Predicted RBP	12.02	□□□□□ -0.49
THI3	YDL080C	NUP170	P38181	1502 aa		11.97	□□□□□ -0.49
THI3	YDL080C	SNT2	P53127	1403 aa		11.96	□□□□□ -0.5
THI3	YDL080C	SSM4	P40318	1319 aa		11.94	□□□□□ -0.5
THI3	YDL080C	RPA190	P10964	1664 aa	Known RBP	11.94	□□□□□ -0.5
THI3	YDL080C	DNF1	P32660	1571 aa		11.93	□□□□□ -0.5
THI3	YDL080C	TY3B-G	Q99315	1547 aa		11.93	□□□□□ -0.5
THI3	YDL080C	NTE1	Q04958	1679 aa		11.9	□□□□□ -0.51
THI3	YDL080C	MTC1	P47018	478 aa	Known RBP	11.88	□□□□□ -0.51
THI3	YDL080C	RPO21	P04050	1733 aa	Known RBP	11.87	□□□□□ -0.51
THI3	YDL080C	YBT1	P32386	1661 aa		11.86	□□□□□ -0.51
THI3	YDL080C	IRC20	Q06554	1556 aa		11.82	□□□□□ -0.52
THI3	YDL080C	RTT106	P40161	455 aa		11.81	□□□□□ -0.52
THI3	YDL080C	GEA2	P39993	1459 aa	Known RBP	11.81	□□□□□ -0.52
THI3	YDL080C	VPS15	P22219	1454 aa		11.78	□□□□□ -0.52
THI3	YDL080C	NUP159	P40477	1460 aa		11.75	□□□□□ -0.53
THI3	YDL080C	CAT8	P39113	1433 aa		11.71	□□□□□ -0.53
THI3	YDL080C	YRF1-1	P0CX20	1796 aa		11.71	□□□□□ -0.53
THI3	YDL080C	YRF1-5	P0CX21	1796 aa		11.71	□□□□□ -0.53
THI3	YDL080C	YRF1-8	P0CX22	1796 aa		11.71	□□□□□ -0.53
THI3	YDL080C	GDB1	Q06625	1536 aa		11.7	□□□□□ -0.54
THI3	YDL080C	SPO14	P36126	1683 aa		11.68	□□□□□ -0.54
THI3	YDL080C	ARO1	P08566	1588 aa	Known RBP	11.65	□□□□□ -0.54
THI3	YDL080C	PDR10	P51533	1564 aa		11.65	□□□□□ -0.54
THI3	YDL080C	PDR12	Q02785	1511 aa		11.63	□□□□□ -0.55
THI3	YDL080C	MET10	P39692	1035 aa		11.62	□□□□□ -0.55
THI3	YDL080C	BUD3	P25558	1636 aa		11.6	□□□□□ -0.55
THI3	YDL080C	CKB1	P43639	278 aa		11.6	□□□□□ -0.55
THI3	YDL080C	SRB8	P25648	1427 aa		11.6	□□□□□ -0.55
THI3	YDL080C	NUP157	P40064	1391 aa	Known RBP	11.59	□□□□□ -0.55
THI3	YDL080C	MET5	P47169	1442 aa		11.58	□□□□□ -0.56
THI3	YDL080C	GCN2	P15442	1659 aa		11.51	□□□□□ -0.57
THI3	YDL080C	YSP2	Q06681	1438 aa		11.49	□□□□□ -0.57
THI3	YDL080C	BUD21	Q08492	214 aa	Predicted RBP	11.46	□□□□□ -0.58
THI3	YDL080C	IQG1	Q12280	1495 aa		11.42	□□□□□ -0.58
THI3	YDL080C	POL5	P39985	1022 aa	Known RBP	11.42	□□□□□ -0.58
THI3	YDL080C	MMS1	Q06211	1407 aa		11.41	□□□□□ -0.58
THI3	YDL080C	SEC7	P11075	2009 aa	Known RBP	11.38	□□□□□ -0.59
THI3	YDL080C	BNR1	P40450	1375 aa		11.35	□□□□□ -0.59
THI3	YDL080C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.35	□□□□□ -0.59	not detected
THI3	YDL080C	YOR093C	Q12275	1648 aa		11.33	□□□□□ -0.6
THI3	YDL080C	NOP7	P53261	605 aa	Known RBP	11.32	□□□□□ -0.6
THI3	YDL080C	CHC1	P22137	1653 aa	Known RBP	11.3	□□□□□ -0.6
THI3	YDL080C	LTE1	P07866	1435 aa		11.26	□□□□□ -0.61
THI3	YDL080C	DOP1	Q03921	1698 aa		11.26	□□□□□ -0.61
THI3	YDL080C	PDR5	P33302	1511 aa	Known RBP	11.26	□□□□□ -0.61
THI3	YDL080C	PAF1	P38351	445 aa		11.23	□□□□□ -0.61
THI3	YDL080C	VMR1	P38735	1592 aa		11.23	□□□□□ -0.61
THI3	YDL080C	BFR2	Q06631	534 aa	Known RBP	11.22	□□□□□ -0.61
THI3	YDL080C	PDR11	P40550	1411 aa		11.21	□□□□□ -0.62
THI3	YDL080C	SPT7	P35177	1332 aa		11.2	□□□□□ -0.62
THI3	YDL080C	ORC1	P54784	914 aa	Predicted RBP	11.2	□□□□□ -0.62
THI3	YDL080C	DRS2	P39524	1355 aa		11.18	□□□□□ -0.62
THI3	YDL080C	TRM3	Q07527	1436 aa		11.18	□□□□□ -0.62
THI3	YDL080C	NUP188	P52593	1655 aa	Known RBP	11.17	□□□□□ -0.62
THI3	YDL080C	RAV1	P47104	1357 aa		11.15	□□□□□ -0.62
THI3	YDL080C	ENP1	P38333	483 aa	Known RBP	11.14	□□□□□ -0.63
THI3	YDL080C	IML1	P47170	1584 aa		11.14	□□□□□ -0.63
THI3	YDL080C	SEC3	P33332	1336 aa	Known RBP	11.13	□□□□□ -0.63
THI3	YDL080C	BNI1	P41832	1953 aa		11.13	□□□□□ -0.63
THI3	YDL080C	RTC1	Q08281	1341 aa		11.12	□□□□□ -0.63
THI3	YDL080C	ITT1	Q04638	464 aa		11.11	□□□□□ -0.63
THI3	YDL080C	TY3B-I	Q7LHG5	1498 aa	Known RBP	11.1	□□□□□ -0.63
THI3	YDL080C	DNF2	Q12675	1612 aa		11.09	□□□□□ -0.63
THI3	YDL080C	TAF5	P38129	798 aa		11.09	□□□□□ -0.63
THI3	YDL080C	NUP192	P47054	1683 aa		11.08	□□□□□ -0.64
THI3	YDL080C	MHP1	P43638	1398 aa		11.08	□□□□□ -0.64
THI3	YDL080C	LEU3	P08638	886 aa		11.05	□□□□□ -0.64
THI3	YDL080C	PSD2	P53037	1138 aa	Known RBP	11.05	□□□□□ -0.64
THI3	YDL080C	TYS1	P36421	394 aa	Known RBP	11.02	□□□□□ -0.65
THI3	YDL080C	ESL2	P36168	1195 aa		11	□□□□□ -0.65
THI3	YDL080C	KIP3	P53086	805 aa	Known RBP	11	□□□□□ -0.65
THI3	YDL080C	YLR419W	Q06698	1435 aa	Known RBP	11	□□□□□ -0.65
THI3	YDL080C	NOP2	P40991	618 aa	Known RBP	10.99	□□□□□ -0.65
THI3	YDL080C	IPL1	P38991	367 aa		10.98	□□□□□ -0.65
THI3	YDL080C	PDS5	Q04264	1277 aa		10.95	□□□□□ -0.66
THI3	YDL080C	URN1	Q06525	465 aa	Known RBP	10.92	□□□□□ -0.66
THI3	YDL080C	PRS1	P32895	427 aa	Known RBP	10.91	□□□□□ -0.66
THI3	YDL080C	NST1	P53935	1240 aa		10.91	□□□□□ -0.66
THI3	YDL080C	SPE2	P21182	396 aa		10.89	□□□□□ -0.67
THI3	YDL080C	YAP3	P38749	330 aa		10.89	□□□□□ -0.67
THI3	YDL080C	RAD9	P14737	1309 aa		10.89	□□□□□ -0.67
THI3	YDL080C	ALD4	P46367	519 aa	Known RBP	10.86	□□□□□ -0.67
THI3	YDL080C	TAF8	Q03750	510 aa		10.86	□□□□□ -0.67
THI3	YDL080C	BCK1	Q01389	1478 aa		10.86	□□□□□ -0.67
THI3	YDL080C	MLP1	Q02455	1875 aa	Known RBP	10.86	□□□□□ -0.67
THI3	YDL080C	CAB1	Q04430	367 aa		10.83	□□□□□ -0.68
THI3	YDL080C	RTG3	P38165	486 aa		10.81	□□□□□ -0.68
THI3	YDL080C	CHZ1	P40019	153 aa	Predicted RBP	10.79	□□□□□ -0.68
THI3	YDL080C	DNF3	Q12674	1656 aa		10.77	□□□□□ -0.68
THI3	YDL080C	SCT1	P32784	759 aa		10.76	□□□□□ -0.69
THI3	YDL080C	HAP1	P0CE41	1502 aa		10.75	□□□□□ -0.69
THI3	YDL080C	FKH1	P40466	484 aa		10.74	□□□□□ -0.69
THI3	YDL080C	KRE5	P22023	1365 aa		10.73	□□□□□ -0.69
THI3	YDL080C	NAP1	P25293	417 aa	Known RBP	10.7	□□□□□ -0.7
THI3	YDL080C	MRX12	P47084	519 aa		10.7	□□□□□ -0.7
THI3	YDL080C	YML133C	Q03099	1374 aa		10.7	□□□□□ -0.7
THI3	YDL080C	YLL067C	Q07888	1374 aa		10.7	□□□□□ -0.7
THI3	YDL080C	YLL066C	Q99208	1374 aa		10.7	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms