RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W TY1B-GR1Q12141 1755 aa10.03□□□□□ -0.8
SIT4YDL047W TY1B-BLQ12490 1755 aa10.03□□□□□ -0.8
SIT4YDL047W MMS1Q06211 1407 aa10.01□□□□□ -0.81
SIT4YDL047W TSC11P40061 1430 aa10□□□□□ -0.81
SIT4YDL047W DRS2P39524 1355 aa10□□□□□ -0.81
SIT4YDL047W VPS15P22219 1454 aa9.99□□□□□ -0.81
SIT4YDL047W VTH1P40438 1549 aa9.96□□□□□ -0.82
SIT4YDL047W VTH2P40890 1549 aa9.96□□□□□ -0.82
SIT4YDL047W NTE1Q04958 1679 aa9.95□□□□□ -0.82
SIT4YDL047W RPO21P04050 1733 aaKnown RBP9.93□□□□□ -0.82
SIT4YDL047W MYO4P32492 1471 aa9.91□□□□□ -0.82
SIT4YDL047W SNT2P53127 1403 aa9.89□□□□□ -0.83
SIT4YDL047W IRC20Q06554 1556 aa9.86□□□□□ -0.83
SIT4YDL047W MET10P39692 1035 aa9.85□□□□□ -0.83
SIT4YDL047W YTA7P40340 1379 aa9.84□□□□□ -0.83
SIT4YDL047W SNQ2P32568 1501 aaKnown RBP9.82□□□□□ -0.84
SIT4YDL047W DNF2Q12675 1612 aa9.81□□□□□ -0.84
SIT4YDL047W STH1P32597 1359 aa9.8□□□□□ -0.84
SIT4YDL047W NUP170P38181 1502 aa9.8□□□□□ -0.84
SIT4YDL047W RTT106P40161 455 aa9.75□□□□□ -0.85
SIT4YDL047W SPO14P36126 1683 aa9.74□□□□□ -0.85
SIT4YDL047W PDR12Q02785 1511 aa9.73□□□□□ -0.85
SIT4YDL047W ULS1Q08562 1619 aa9.73□□□□□ -0.85
SIT4YDL047W IQG1Q12280 1495 aa9.66□□□□□ -0.86
SIT4YDL047W TRM3Q07527 1436 aa9.65□□□□□ -0.87
SIT4YDL047W MLP2P40457 1679 aa9.64□□□□□ -0.87
SIT4YDL047W DOP1Q03921 1698 aa9.64□□□□□ -0.87
SIT4YDL047W GDB1Q06625 1536 aa9.63□□□□□ -0.87
SIT4YDL047W NUP157P40064 1391 aaKnown RBP9.63□□□□□ -0.87
SIT4YDL047W PDR10P51533 1564 aa9.62□□□□□ -0.87
SIT4YDL047W BUD3P25558 1636 aa9.6□□□□□ -0.87
SIT4YDL047W YOR093CQ12275 1648 aa9.58□□□□□ -0.88
SIT4YDL047W PDR15Q04182 1529 aaKnown RBP9.52□□□□□ -0.88
SIT4YDL047W TAF7Q05021 590 aa9.52□□□□□ -0.89
SIT4YDL047W SEC7P11075 2009 aaKnown RBP9.51□□□□□ -0.89
SIT4YDL047W ARO1P08566 1588 aaKnown RBP9.5□□□□□ -0.89
SIT4YDL047W SAS10Q12136 610 aaPredicted RBP9.5□□□□□ -0.89
SIT4YDL047W CHC1P22137 1653 aaKnown RBP9.46□□□□□ -0.89
SIT4YDL047W YAP3P38749 330 aa9.43□□□□□ -0.9
SIT4YDL047W IFH1P39520 1085 aa9.43□□□□□ -0.9
SIT4YDL047W CAT8P39113 1433 aa9.41□□□□□ -0.9
SIT4YDL047W DNF3Q12674 1656 aa9.41□□□□□ -0.9
SIT4YDL047W GEA1P47102 1408 aaPredicted RBP9.36□□□□□ -0.91
SIT4YDL047W YSP2Q06681 1438 aa9.36□□□□□ -0.91
SIT4YDL047W BNR1P40450 1375 aa9.35□□□□□ -0.91
SIT4YDL047W CKB1P43639 278 aa9.34□□□□□ -0.91
SIT4YDL047W MAK10Q02197 733 aa9.34□□□□□ -0.91
SIT4YDL047W YBT1P32386 1661 aa9.32□□□□□ -0.92
SIT4YDL047W URN1Q06525 465 aaKnown RBP9.32□□□□□ -0.92
SIT4YDL047W TY3B-GQ99315 1547 aa9.31□□□□□ -0.92
SIT4YDL047W USO1P25386 1790 aa9.21□□□□□ -0.94
SIT4YDL047W IPL1P38991 367 aa9.18□□□□□ -0.94
SIT4YDL047W SRB8P25648 1427 aa9.16□□□□□ -0.94
SIT4YDL047W YMR196WQ04336 1088 aa9.16□□□□□ -0.94
SIT4YDL047W HAP1P0CE41 1502 aa9.15□□□□□ -0.94
SIT4YDL047W BUD21Q08492 214 aaPredicted RBP9.11□□□□□ -0.95
SIT4YDL047W THI12P42883 340 aa9.1□□□□□ -0.95
SIT4YDL047W THI5P43534 340 aa9.1□□□□□ -0.95
SIT4YDL047W THI11P47183 340 aa9.1□□□□□ -0.95
SIT4YDL047W THI13Q07748 340 aa9.1□□□□□ -0.95
SIT4YDL047W TY1B-NL2Q99337 1749 aaKnown RBP9.1□□□□□ -0.95
SIT4YDL047W TYS1P36421 394 aaKnown RBP9.09□□□□□ -0.95
SIT4YDL047W IML1P47170 1584 aa9.08□□□□□ -0.96
SIT4YDL047W NUP188P52593 1655 aaKnown RBP9.07□□□□□ -0.96
SIT4YDL047W VMR1P38735 1592 aa9.03□□□□□ -0.96
SIT4YDL047W YAH1Q12184 172 aaKnown RBP8.96□□□□□ -0.98
SIT4YDL047W PDR5P33302 1511 aaKnown RBP8.95□□□□□ -0.98
SIT4YDL047W GLN1P32288 370 aaKnown RBP8.91□□□□□ -0.98
SIT4YDL047W IKI3Q06706 1349 aaKnown RBP8.86□□□□□ -0.99
SIT4YDL047W PTP3P40048 928 aa8.86□□□□□ -0.99
SIT4YDL047W CFT1Q06632 1357 aaKnown RBP8.86□□□□□ -0.99
SIT4YDL047W YIL055CP40523 627 aaKnown RBP8.84□□□□□ -0.99
SIT4YDL047W PDR11P40550 1411 aa8.84□□□□□ -0.99
SIT4YDL047W MRX12P47084 519 aa8.84□□□□□ -0.99
SIT4YDL047W RIA1P53893 1110 aa8.83□□□□□ -1
SIT4YDL047W APP1P53933 587 aa8.83□□□□□ -1
SIT4YDL047W KRE5P22023 1365 aa8.83□□□□□ -1
SIT4YDL047W YNR029CP53729 429 aaKnown RBP8.82□□□□□ -1
SIT4YDL047W GCN2P15442 1659 aa8.78□□□□□ -1
SIT4YDL047W SSM4P40318 1319 aa8.78□□□□□ -1
SIT4YDL047W FAP1P53971 965 aa8.77□□□□□ -1.01
SIT4YDL047W BCK1Q01389 1478 aa8.76□□□□□ -1.01
SIT4YDL047W REB1P21538 810 aa8.72□□□□□ -1.01
SIT4YDL047W YMR074CQ04773 145 aa8.72□□□□□ -1.01
SIT4YDL047W ENT1Q12518 454 aa8.72□□□□□ -1.01
SIT4YDL047W ALD4P46367 519 aaKnown RBP8.71□□□□□ -1.02
SIT4YDL047W PRI1P10363 409 aa8.7□□□□□ -1.02
SIT4YDL047W CAB1Q04430 367 aa8.7□□□□□ -1.02
SIT4YDL047W RAV1P47104 1357 aa8.7□□□□□ -1.02
SIT4YDL047W PAF1P38351 445 aa8.69□□□□□ -1.02
SIT4YDL047W ENV9Q08651 330 aa8.68□□□□□ -1.02
SIT4YDL047W NUP192P47054 1683 aa8.68□□□□□ -1.02
SIT4YDL047W RAD9P14737 1309 aa8.67□□□□□ -1.02
SIT4YDL047W RTC1Q08281 1341 aa8.65□□□□□ -1.02
SIT4YDL047W TY3B-IQ7LHG5 1498 aaKnown RBP8.64□□□□□ -1.03
SIT4YDL047W BFR2Q06631 534 aaKnown RBP8.64□□□□□ -1.03
SIT4YDL047W IMH1Q06704 911 aaKnown RBP8.63□□□□□ -1.03
SIT4YDL047W RRP5Q05022 1729 aaKnown RBP8.58□□□□□ -1.04
SIT4YDL047W NAP1P25293 417 aaKnown RBP8.56□□□□□ -1.04
SIT4YDL047W BUD31P25337 157 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms