RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W TY1B-LR1Q12088 1755 aaKnown RBP10.32□□□□□ -0.76
CDC7YDL017W TY1B-NL1Q12112 1755 aa10.32□□□□□ -0.76
CDC7YDL017W TY1B-GR1Q12141 1755 aa10.32□□□□□ -0.76
CDC7YDL017W TY1B-BLQ12490 1755 aa10.32□□□□□ -0.76
CDC7YDL017W ESC1Q03661 1658 aaKnown RBP10.32□□□□□ -0.76
CDC7YDL017W DNF1P32660 1571 aa10.31□□□□□ -0.76
CDC7YDL017W RPA190P10964 1664 aaKnown RBP10.27□□□□□ -0.77
CDC7YDL017W TY3B-GQ99315 1547 aa10.26□□□□□ -0.77
CDC7YDL017W SSM4P40318 1319 aa10.26□□□□□ -0.77
CDC7YDL017W GEA2P39993 1459 aaKnown RBP10.23□□□□□ -0.77
CDC7YDL017W NTE1Q04958 1679 aa10.21□□□□□ -0.77
CDC7YDL017W RTT106P40161 455 aa10.21□□□□□ -0.78
CDC7YDL017W IRC20Q06554 1556 aa10.21□□□□□ -0.78
CDC7YDL017W RPO21P04050 1733 aaKnown RBP10.2□□□□□ -0.78
CDC7YDL017W NUP159P40477 1460 aa10.18□□□□□ -0.78
CDC7YDL017W VPS15P22219 1454 aa10.17□□□□□ -0.78
CDC7YDL017W CAT8P39113 1433 aa10.17□□□□□ -0.78
CDC7YDL017W YBT1P32386 1661 aa10.14□□□□□ -0.79
CDC7YDL017W MET5P47169 1442 aa10.11□□□□□ -0.79
CDC7YDL017W PDR12Q02785 1511 aa10.09□□□□□ -0.79
CDC7YDL017W MET10P39692 1035 aa10.09□□□□□ -0.79
CDC7YDL017W GDB1Q06625 1536 aa10.07□□□□□ -0.8
CDC7YDL017W PDR10P51533 1564 aa10.06□□□□□ -0.8
CDC7YDL017W ARO1P08566 1588 aaKnown RBP10.04□□□□□ -0.8
CDC7YDL017W YRF1-1P0CX20 1796 aa10.04□□□□□ -0.8
CDC7YDL017W YRF1-5P0CX21 1796 aa10.04□□□□□ -0.8
CDC7YDL017W YRF1-8P0CX22 1796 aa10.04□□□□□ -0.8
CDC7YDL017W SRB8P25648 1427 aa10.04□□□□□ -0.8
CDC7YDL017W NUP157P40064 1391 aaKnown RBP10.03□□□□□ -0.8
CDC7YDL017W SPO14P36126 1683 aa10.03□□□□□ -0.8
CDC7YDL017W CKB1P43639 278 aa9.99□□□□□ -0.81
CDC7YDL017W YSP2Q06681 1438 aa9.95□□□□□ -0.82
CDC7YDL017W MMS1Q06211 1407 aa9.92□□□□□ -0.82
CDC7YDL017W BUD3P25558 1636 aa9.91□□□□□ -0.82
CDC7YDL017W IQG1Q12280 1495 aa9.91□□□□□ -0.82
CDC7YDL017W BUD21Q08492 214 aaPredicted RBP9.9□□□□□ -0.82
CDC7YDL017W GCN2P15442 1659 aa9.87□□□□□ -0.83
CDC7YDL017W LTE1P07866 1435 aa9.84□□□□□ -0.83
CDC7YDL017W BNR1P40450 1375 aa9.81□□□□□ -0.84
CDC7YDL017W BFR2Q06631 534 aaKnown RBP9.8□□□□□ -0.84
CDC7YDL017W POL5P39985 1022 aaKnown RBP9.79□□□□□ -0.84
CDC7YDL017W SEC7P11075 2009 aaKnown RBP9.79□□□□□ -0.84
CDC7YDL017W NOP7P53261 605 aaKnown RBP9.75□□□□□ -0.85
CDC7YDL017W TRM3Q07527 1436 aa9.75□□□□□ -0.85
CDC7YDL017W PDR5P33302 1511 aaKnown RBP9.74□□□□□ -0.85
CDC7YDL017W DRS2P39524 1355 aa9.73□□□□□ -0.85
CDC7YDL017W YOR093CQ12275 1648 aa9.73□□□□□ -0.85
CDC7YDL017W PAF1P38351 445 aa9.71□□□□□ -0.86
CDC7YDL017W DOP1Q03921 1698 aa9.71□□□□□ -0.86
CDC7YDL017W CHC1P22137 1653 aaKnown RBP9.69□□□□□ -0.86
CDC7YDL017W PDR11P40550 1411 aa9.66□□□□□ -0.86
CDC7YDL017W MIF2P35201 549 aa9.66□□□□□ -0.86
CDC7YDL017W RAV1P47104 1357 aa9.65□□□□□ -0.86
CDC7YDL017W VMR1P38735 1592 aa9.64□□□□□ -0.87
CDC7YDL017W NSR1P27476 414 aaKnown RBP RIP-Chip data9.64□□□□□ -0.87not detected
CDC7YDL017W ITT1Q04638 464 aa9.64□□□□□ -0.87
CDC7YDL017W BNI1P41832 1953 aa9.62□□□□□ -0.87
CDC7YDL017W RTC1Q08281 1341 aa9.62□□□□□ -0.87
CDC7YDL017W NUP188P52593 1655 aaKnown RBP9.61□□□□□ -0.87
CDC7YDL017W IML1P47170 1584 aa9.59□□□□□ -0.87
CDC7YDL017W SEC3P33332 1336 aaKnown RBP9.59□□□□□ -0.87
CDC7YDL017W TY3B-IQ7LHG5 1498 aaKnown RBP9.58□□□□□ -0.88
CDC7YDL017W DNF2Q12675 1612 aa9.56□□□□□ -0.88
CDC7YDL017W SPT7P35177 1332 aa9.56□□□□□ -0.88
CDC7YDL017W DIP2Q12220 943 aaPredicted RBP9.56□□□□□ -0.88
CDC7YDL017W ENP1P38333 483 aaKnown RBP9.55□□□□□ -0.88
CDC7YDL017W MHP1P43638 1398 aa9.54□□□□□ -0.88
CDC7YDL017W IPL1P38991 367 aa9.52□□□□□ -0.88
CDC7YDL017W ORC1P54784 914 aaPredicted RBP9.52□□□□□ -0.88
CDC7YDL017W TAF5P38129 798 aa9.51□□□□□ -0.89
CDC7YDL017W URN1Q06525 465 aaKnown RBP9.51□□□□□ -0.89
CDC7YDL017W ESL2P36168 1195 aa9.51□□□□□ -0.89
CDC7YDL017W TYS1P36421 394 aaKnown RBP9.51□□□□□ -0.89
CDC7YDL017W NUP192P47054 1683 aa9.49□□□□□ -0.89
CDC7YDL017W YLR419WQ06698 1435 aaKnown RBP9.48□□□□□ -0.89
CDC7YDL017W AVT3P36062 692 aa9.46□□□□□ -0.89
CDC7YDL017W KIP3P53086 805 aaKnown RBP9.46□□□□□ -0.89
CDC7YDL017W YAP3P38749 330 aa9.46□□□□□ -0.9
CDC7YDL017W PSD2P53037 1138 aaKnown RBP9.43□□□□□ -0.9
CDC7YDL017W PDS5Q04264 1277 aa9.41□□□□□ -0.9
CDC7YDL017W HAP1P0CE41 1502 aa9.4□□□□□ -0.9
CDC7YDL017W SPE2P21182 396 aa9.4□□□□□ -0.91
CDC7YDL017W ALD4P46367 519 aaKnown RBP9.39□□□□□ -0.91
CDC7YDL017W BCK1Q01389 1478 aa9.39□□□□□ -0.91
CDC7YDL017W RAD9P14737 1309 aa9.38□□□□□ -0.91
CDC7YDL017W SCT1P32784 759 aa9.38□□□□□ -0.91
CDC7YDL017W LEU3P08638 886 aa9.37□□□□□ -0.91
CDC7YDL017W ABP1P15891 592 aaKnown RBP9.37□□□□□ -0.91
CDC7YDL017W TAF8Q03750 510 aa9.36□□□□□ -0.91
CDC7YDL017W YFR006WP43590 535 aa9.34□□□□□ -0.91
CDC7YDL017W PRS1P32895 427 aaKnown RBP9.33□□□□□ -0.92
CDC7YDL017W CAB1Q04430 367 aa9.33□□□□□ -0.92
CDC7YDL017W NOP2P40991 618 aaKnown RBP9.32□□□□□ -0.92
CDC7YDL017W TFA1P36100 482 aa9.31□□□□□ -0.92
CDC7YDL017W NST1P53935 1240 aa9.31□□□□□ -0.92
CDC7YDL017W DNF3Q12674 1656 aa9.3□□□□□ -0.92
CDC7YDL017W NAP1P25293 417 aaKnown RBP9.29□□□□□ -0.92
CDC7YDL017W CHZ1P40019 153 aaPredicted RBP9.28□□□□□ -0.92
CDC7YDL017W FKH1P40466 484 aa9.27□□□□□ -0.93
CDC7YDL017W FAP1P53971 965 aa9.27□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms