RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W TY1B-LR1Q12088 1755 aaKnown RBP11.16□□□□□ -0.62
ABP1YCR088W TY1B-NL1Q12112 1755 aa11.16□□□□□ -0.62
ABP1YCR088W TY1B-GR1Q12141 1755 aa11.16□□□□□ -0.62
ABP1YCR088W TY1B-BLQ12490 1755 aa11.16□□□□□ -0.62
ABP1YCR088W PAN1P32521 1480 aa11.16□□□□□ -0.62
ABP1YCR088W CDC25P04821 1589 aa11.15□□□□□ -0.62
ABP1YCR088W SNT2P53127 1403 aa11.14□□□□□ -0.63
ABP1YCR088W ESC1Q03661 1658 aaKnown RBP11.14□□□□□ -0.63
ABP1YCR088W YBT1P32386 1661 aa11.11□□□□□ -0.63
ABP1YCR088W VPS15P22219 1454 aa11.09□□□□□ -0.63
ABP1YCR088W RTT106P40161 455 aa11.03□□□□□ -0.64
ABP1YCR088W IRC20Q06554 1556 aa11.02□□□□□ -0.65
ABP1YCR088W DNF1P32660 1571 aa11□□□□□ -0.65
ABP1YCR088W NTE1Q04958 1679 aa10.99□□□□□ -0.65
ABP1YCR088W RPA190P10964 1664 aaKnown RBP10.98□□□□□ -0.65
ABP1YCR088W GEA2P39993 1459 aaKnown RBP10.97□□□□□ -0.65
ABP1YCR088W RPO21P04050 1733 aaKnown RBP10.97□□□□□ -0.65
ABP1YCR088W POL5P39985 1022 aaKnown RBP10.97□□□□□ -0.65
ABP1YCR088W NOP2P40991 618 aaKnown RBP10.97□□□□□ -0.65
ABP1YCR088W GDB1Q06625 1536 aa10.95□□□□□ -0.66
ABP1YCR088W CAT8P39113 1433 aa10.93□□□□□ -0.66
ABP1YCR088W PDR10P51533 1564 aa10.91□□□□□ -0.66
ABP1YCR088W BFR2Q06631 534 aaKnown RBP10.9□□□□□ -0.66
ABP1YCR088W ARO1P08566 1588 aaKnown RBP10.9□□□□□ -0.66
ABP1YCR088W SRB8P25648 1427 aa10.87□□□□□ -0.67
ABP1YCR088W SPT7P35177 1332 aa10.85□□□□□ -0.67
ABP1YCR088W ENP1P38333 483 aaKnown RBP10.84□□□□□ -0.67
ABP1YCR088W GCN2P15442 1659 aa10.83□□□□□ -0.68
ABP1YCR088W NUP159P40477 1460 aa10.82□□□□□ -0.68
ABP1YCR088W BUD3P25558 1636 aa10.82□□□□□ -0.68
ABP1YCR088W CKB1P43639 278 aa10.82□□□□□ -0.68
ABP1YCR088W SPO14P36126 1683 aa10.81□□□□□ -0.68
ABP1YCR088W YRF1-1P0CX20 1796 aa10.77□□□□□ -0.69
ABP1YCR088W YRF1-5P0CX21 1796 aa10.77□□□□□ -0.69
ABP1YCR088W YRF1-8P0CX22 1796 aa10.77□□□□□ -0.69
ABP1YCR088W PDR12Q02785 1511 aa10.77□□□□□ -0.69
ABP1YCR088W NUP157P40064 1391 aaKnown RBP10.74□□□□□ -0.69
ABP1YCR088W SEC3P33332 1336 aaKnown RBP10.73□□□□□ -0.69
ABP1YCR088W MET10P39692 1035 aa10.72□□□□□ -0.69
ABP1YCR088W YSP2Q06681 1438 aa10.71□□□□□ -0.69
ABP1YCR088W BUD21Q08492 214 aaPredicted RBP10.7□□□□□ -0.7
ABP1YCR088W DIP2Q12220 943 aaPredicted RBP10.7□□□□□ -0.7
ABP1YCR088W NOP7P53261 605 aaKnown RBP10.67□□□□□ -0.7
ABP1YCR088W IQG1Q12280 1495 aa10.67□□□□□ -0.7
ABP1YCR088W PDR5P33302 1511 aaKnown RBP10.66□□□□□ -0.7
ABP1YCR088W LEU3P08638 886 aa10.65□□□□□ -0.7
ABP1YCR088W ORC1P54784 914 aaPredicted RBP10.65□□□□□ -0.7
ABP1YCR088W MMS1Q06211 1407 aa10.64□□□□□ -0.71
ABP1YCR088W YOR093CQ12275 1648 aa10.63□□□□□ -0.71
ABP1YCR088W PSD2P53037 1138 aaKnown RBP10.62□□□□□ -0.71
ABP1YCR088W PRS1P32895 427 aaKnown RBP10.62□□□□□ -0.71
ABP1YCR088W MHP1P43638 1398 aa10.58□□□□□ -0.72
ABP1YCR088W LTE1P07866 1435 aa10.58□□□□□ -0.72
ABP1YCR088W AVT3P36062 692 aa10.56□□□□□ -0.72
ABP1YCR088W CHC1P22137 1653 aaKnown RBP10.55□□□□□ -0.72
ABP1YCR088W PAF1P38351 445 aa10.54□□□□□ -0.72
ABP1YCR088W MET5P47169 1442 aa10.53□□□□□ -0.72
ABP1YCR088W YLR419WQ06698 1435 aaKnown RBP10.53□□□□□ -0.72
ABP1YCR088W SEC7P11075 2009 aaKnown RBP10.53□□□□□ -0.72
ABP1YCR088W TY3B-IQ7LHG5 1498 aaKnown RBP10.53□□□□□ -0.72
ABP1YCR088W BNR1P40450 1375 aa10.53□□□□□ -0.72
ABP1YCR088W PDR11P40550 1411 aa10.53□□□□□ -0.72
ABP1YCR088W VMR1P38735 1592 aa10.49□□□□□ -0.73
ABP1YCR088W NST1P53935 1240 aa10.47□□□□□ -0.73
ABP1YCR088W RAV1P47104 1357 aa10.47□□□□□ -0.73
ABP1YCR088W TAF5P38129 798 aa10.45□□□□□ -0.74
ABP1YCR088W RTC1Q08281 1341 aa10.44□□□□□ -0.74
ABP1YCR088W PDS5Q04264 1277 aa10.44□□□□□ -0.74
ABP1YCR088W NUP192P47054 1683 aa10.42□□□□□ -0.74
ABP1YCR088W DOP1Q03921 1698 aa10.42□□□□□ -0.74
ABP1YCR088W DRS2P39524 1355 aa10.42□□□□□ -0.74
ABP1YCR088W KIP3P53086 805 aaKnown RBP10.4□□□□□ -0.74
ABP1YCR088W NUP188P52593 1655 aaKnown RBP10.39□□□□□ -0.75
ABP1YCR088W IML1P47170 1584 aa10.39□□□□□ -0.75
ABP1YCR088W CFT1Q06632 1357 aaKnown RBP10.37□□□□□ -0.75
ABP1YCR088W ESL2P36168 1195 aa10.33□□□□□ -0.76
ABP1YCR088W FUN12P39730 1002 aaKnown RBP10.33□□□□□ -0.76
ABP1YCR088W DNF2Q12675 1612 aa10.31□□□□□ -0.76
ABP1YCR088W SPE2P21182 396 aa10.27□□□□□ -0.77
ABP1YCR088W TRM3Q07527 1436 aa10.26□□□□□ -0.77
ABP1YCR088W TFA1P36100 482 aa10.26□□□□□ -0.77
ABP1YCR088W TYS1P36421 394 aaKnown RBP10.24□□□□□ -0.77
ABP1YCR088W RTG3P38165 486 aa10.24□□□□□ -0.77
ABP1YCR088W YAP3P38749 330 aa10.24□□□□□ -0.77
ABP1YCR088W MLP1Q02455 1875 aaKnown RBP10.24□□□□□ -0.77
ABP1YCR088W FAP1P53971 965 aa10.24□□□□□ -0.77
ABP1YCR088W RAD9P14737 1309 aa10.2□□□□□ -0.78
ABP1YCR088W TAF8Q03750 510 aa10.19□□□□□ -0.78
ABP1YCR088W RVB2Q12464 471 aaKnown RBP10.19□□□□□ -0.78
ABP1YCR088W TRK1P12685 1235 aa10.18□□□□□ -0.78
ABP1YCR088W ISW2Q08773 1120 aa10.18□□□□□ -0.78
ABP1YCR088W BCK1Q01389 1478 aa10.17□□□□□ -0.78
ABP1YCR088W YEF3P16521 1044 aaKnown RBP10.16□□□□□ -0.78
ABP1YCR088W IPL1P38991 367 aa10.16□□□□□ -0.78
ABP1YCR088W CHZ1P40019 153 aaPredicted RBP10.16□□□□□ -0.78
ABP1YCR088W VPS27P40343 622 aaKnown RBP10.16□□□□□ -0.78
ABP1YCR088W CDC45Q08032 650 aa10.16□□□□□ -0.78
ABP1YCR088W FKH1P40466 484 aa10.15□□□□□ -0.78
ABP1YCR088W RPP0P05317 312 aaKnown RBP10.14□□□□□ -0.79
ABP1YCR088W ALD4P46367 519 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms