RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C MET5P47169 1442 aa11.31□□□□□ -0.6
RRP43YCR035C TY1B-JR2P47100 1755 aaKnown RBP11.29□□□□□ -0.6
RRP43YCR035C TY1B-ER2Q03619 1755 aa11.29□□□□□ -0.6
RRP43YCR035C TY1B-MR1Q04214 1755 aa11.29□□□□□ -0.6
RRP43YCR035C TY1B-MR2Q04670 1755 aaKnown RBP11.29□□□□□ -0.6
RRP43YCR035C TY1B-LR1Q12088 1755 aaKnown RBP11.29□□□□□ -0.6
RRP43YCR035C TY1B-NL1Q12112 1755 aa11.29□□□□□ -0.6
RRP43YCR035C TY1B-GR1Q12141 1755 aa11.29□□□□□ -0.6
RRP43YCR035C TY1B-BLQ12490 1755 aa11.29□□□□□ -0.6
RRP43YCR035C IFH1P39520 1085 aa11.27□□□□□ -0.61
RRP43YCR035C RTT106P40161 455 aa11.27□□□□□ -0.61
RRP43YCR035C SNT2P53127 1403 aa11.26□□□□□ -0.61
RRP43YCR035C NUP159P40477 1460 aa11.26□□□□□ -0.61
RRP43YCR035C AAD16Q02895 342 aa11.24□□□□□ -0.61
RRP43YCR035C PDR15Q04182 1529 aaKnown RBP11.2□□□□□ -0.62
RRP43YCR035C MLP2P40457 1679 aa11.2□□□□□ -0.62
RRP43YCR035C NTE1Q04958 1679 aa11.2□□□□□ -0.62
RRP43YCR035C RPO21P04050 1733 aaKnown RBP11.18□□□□□ -0.62
RRP43YCR035C MET10P39692 1035 aa11.17□□□□□ -0.62
RRP43YCR035C ULS1Q08562 1619 aa11.17□□□□□ -0.62
RRP43YCR035C YRF1-1P0CX20 1796 aa11.13□□□□□ -0.63
RRP43YCR035C YRF1-5P0CX21 1796 aa11.13□□□□□ -0.63
RRP43YCR035C YRF1-8P0CX22 1796 aa11.13□□□□□ -0.63
RRP43YCR035C GEA2P39993 1459 aaKnown RBP11.12□□□□□ -0.63
RRP43YCR035C GEA1P47102 1408 aaPredicted RBP11.12□□□□□ -0.63
RRP43YCR035C LTE1P07866 1435 aa11.09□□□□□ -0.63
RRP43YCR035C VPS15P22219 1454 aa11.09□□□□□ -0.63
RRP43YCR035C IRC20Q06554 1556 aa11.02□□□□□ -0.65
RRP43YCR035C NUP157P40064 1391 aaKnown RBP11.02□□□□□ -0.65
RRP43YCR035C PDR12Q02785 1511 aa11.01□□□□□ -0.65
RRP43YCR035C RPL17AP05740 184 aaKnown RBP11□□□□□ -0.65
RRP43YCR035C RPL17BP46990 184 aaKnown RBP11□□□□□ -0.65
RRP43YCR035C SPO14P36126 1683 aa11□□□□□ -0.65
RRP43YCR035C ITT1Q04638 464 aa10.99□□□□□ -0.65
RRP43YCR035C CAT8P39113 1433 aa10.98□□□□□ -0.65
RRP43YCR035C TY3B-GQ99315 1547 aa10.98□□□□□ -0.65
RRP43YCR035C IKI3Q06706 1349 aaKnown RBP10.96□□□□□ -0.65
RRP43YCR035C GDB1Q06625 1536 aa10.95□□□□□ -0.66
RRP43YCR035C DRS2P39524 1355 aa10.95□□□□□ -0.66
RRP43YCR035C CKB1P43639 278 aa10.95□□□□□ -0.66
RRP43YCR035C PDR10P51533 1564 aa10.94□□□□□ -0.66
RRP43YCR035C YCK3P39962 524 aa10.93□□□□□ -0.66
RRP43YCR035C NUP170P38181 1502 aa10.9□□□□□ -0.66
RRP43YCR035C IQG1Q12280 1495 aa10.9□□□□□ -0.66
RRP43YCR035C YBT1P32386 1661 aa10.89□□□□□ -0.67
RRP43YCR035C BNI1P41832 1953 aa10.88□□□□□ -0.67
RRP43YCR035C REB1P21538 810 aa10.85□□□□□ -0.67
RRP43YCR035C SSM4P40318 1319 aa10.84□□□□□ -0.67
RRP43YCR035C ARO1P08566 1588 aaKnown RBP10.83□□□□□ -0.68
RRP43YCR035C BUD3P25558 1636 aa10.83□□□□□ -0.68
RRP43YCR035C TSR3Q12094 313 aaKnown RBP10.82□□□□□ -0.68
RRP43YCR035C MMS1Q06211 1407 aa10.82□□□□□ -0.68
RRP43YCR035C SRB8P25648 1427 aa10.81□□□□□ -0.68
RRP43YCR035C YSP2Q06681 1438 aa10.81□□□□□ -0.68
RRP43YCR035C BUD21Q08492 214 aaPredicted RBP10.78□□□□□ -0.68
RRP43YCR035C HAA1Q12753 694 aaKnown RBP10.78□□□□□ -0.68
RRP43YCR035C BNR1P40450 1375 aa10.77□□□□□ -0.69
RRP43YCR035C TRM3Q07527 1436 aa10.75□□□□□ -0.69
RRP43YCR035C SEC7P11075 2009 aaKnown RBP10.72□□□□□ -0.69
RRP43YCR035C DOP1Q03921 1698 aa10.71□□□□□ -0.69
RRP43YCR035C ABP1P15891 592 aaKnown RBP10.66□□□□□ -0.7
RRP43YCR035C SPT21P35209 758 aa10.66□□□□□ -0.7
RRP43YCR035C CHC1P22137 1653 aaKnown RBP10.61□□□□□ -0.71
RRP43YCR035C DNF2Q12675 1612 aa10.58□□□□□ -0.72
RRP43YCR035C URN1Q06525 465 aaKnown RBP10.56□□□□□ -0.72
RRP43YCR035C YAP3P38749 330 aa10.54□□□□□ -0.72
RRP43YCR035C GCN2P15442 1659 aa10.5□□□□□ -0.73
RRP43YCR035C RIM101P33400 625 aa10.49□□□□□ -0.73
RRP43YCR035C IPL1P38991 367 aa10.49□□□□□ -0.73
RRP43YCR035C PAF1P38351 445 aa10.48□□□□□ -0.73
RRP43YCR035C YOR093CQ12275 1648 aa10.47□□□□□ -0.73
RRP43YCR035C TYS1P36421 394 aaKnown RBP10.47□□□□□ -0.73
RRP43YCR035C MIF2P35201 549 aa10.44□□□□□ -0.74
RRP43YCR035C NOP7P53261 605 aaKnown RBP10.44□□□□□ -0.74
RRP43YCR035C NUP188P52593 1655 aaKnown RBP10.44□□□□□ -0.74
RRP43YCR035C MRPL32P25348 183 aa10.42□□□□□ -0.74
RRP43YCR035C VMR1P38735 1592 aa10.42□□□□□ -0.74
RRP43YCR035C PDR5P33302 1511 aaKnown RBP10.42□□□□□ -0.74
RRP43YCR035C PDR11P40550 1411 aa10.41□□□□□ -0.74
RRP43YCR035C IML1P47170 1584 aa10.39□□□□□ -0.75
RRP43YCR035C MAK10Q02197 733 aa10.36□□□□□ -0.75
RRP43YCR035C RAV1P47104 1357 aa10.35□□□□□ -0.75
RRP43YCR035C DNF3Q12674 1656 aa10.34□□□□□ -0.75
RRP43YCR035C RTC1Q08281 1341 aa10.32□□□□□ -0.76
RRP43YCR035C YKR023WP36119 530 aaKnown RBP10.29□□□□□ -0.76
RRP43YCR035C TAF5P38129 798 aa10.26□□□□□ -0.77
RRP43YCR035C HAP1P0CE41 1502 aa10.24□□□□□ -0.77
RRP43YCR035C ESL2P36168 1195 aa10.23□□□□□ -0.77
RRP43YCR035C ALD4P46367 519 aaKnown RBP10.22□□□□□ -0.77
RRP43YCR035C MRX12P47084 519 aa10.22□□□□□ -0.77
RRP43YCR035C ORC1P54784 914 aaPredicted RBP10.22□□□□□ -0.77
RRP43YCR035C RAD9P14737 1309 aa10.2□□□□□ -0.78
RRP43YCR035C CAB1Q04430 367 aa10.19□□□□□ -0.78
RRP43YCR035C RIA1P53893 1110 aa10.18□□□□□ -0.78
RRP43YCR035C KRE5P22023 1365 aa10.17□□□□□ -0.78
RRP43YCR035C POL5P39985 1022 aaKnown RBP10.17□□□□□ -0.78
RRP43YCR035C NUP192P47054 1683 aa10.16□□□□□ -0.78
RRP43YCR035C YFR006WP43590 535 aa10.16□□□□□ -0.78
RRP43YCR035C OXP1P28273 1286 aa10.15□□□□□ -0.78
RRP43YCR035C KIP3P53086 805 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 103.8 ms