RNA–Protein interactions for RNA: YBR114W

RAD16, Transcript of Nucleotide excision repair (NER) protein, yeastyeast

Gene RAD16, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAD16YBR114W TY1B-GR1Q12141 1755 aa6.29□□□□□ -1.4
RAD16YBR114W TY1B-BLQ12490 1755 aa6.29□□□□□ -1.4
RAD16YBR114W TRM732Q03496 1420 aa6.29□□□□□ -1.4
RAD16YBR114W DIP2Q12220 943 aaPredicted RBP6.29□□□□□ -1.4
RAD16YBR114W YRF1-1P0CX20 1796 aa6.29□□□□□ -1.4
RAD16YBR114W YRF1-5P0CX21 1796 aa6.29□□□□□ -1.4
RAD16YBR114W YRF1-8P0CX22 1796 aa6.29□□□□□ -1.4
RAD16YBR114W GEA2P39993 1459 aaKnown RBP6.29□□□□□ -1.4
RAD16YBR114W STU1P38198 1513 aa6.27□□□□□ -1.4
RAD16YBR114W NTE1Q04958 1679 aa6.27□□□□□ -1.41
RAD16YBR114W KRI1P42846 591 aaKnown RBP6.27□□□□□ -1.41
RAD16YBR114W SPP41P38904 1435 aa6.26□□□□□ -1.41
RAD16YBR114W NAP1P25293 417 aaKnown RBP6.26□□□□□ -1.41
RAD16YBR114W RPO21P04050 1733 aaKnown RBP6.25□□□□□ -1.41
RAD16YBR114W NUP159P40477 1460 aa6.25□□□□□ -1.41
RAD16YBR114W VTH1P40438 1549 aa6.23□□□□□ -1.41
RAD16YBR114W VTH2P40890 1549 aa6.23□□□□□ -1.41
RAD16YBR114W NSR1P27476 414 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
RAD16YBR114W MIF2P35201 549 aa6.23□□□□□ -1.41
RAD16YBR114W YPR148CQ06523 435 aa6.23□□□□□ -1.41
RAD16YBR114W VPS15P22219 1454 aa6.22□□□□□ -1.41
RAD16YBR114W TSC11P40061 1430 aa6.22□□□□□ -1.41
RAD16YBR114W FAP1P53971 965 aa6.21□□□□□ -1.42
RAD16YBR114W ITT1Q04638 464 aa6.2□□□□□ -1.42
RAD16YBR114W MYO4P32492 1471 aa6.19□□□□□ -1.42
RAD16YBR114W MNN4P36044 1178 aa6.19□□□□□ -1.42
RAD16YBR114W MMS1Q06211 1407 aa6.17□□□□□ -1.42
RAD16YBR114W IOC4Q04213 475 aa6.17□□□□□ -1.42
RAD16YBR114W DRS2P39524 1355 aa6.17□□□□□ -1.42
RAD16YBR114W IRC20Q06554 1556 aa6.16□□□□□ -1.42
RAD16YBR114W SNQ2P32568 1501 aaKnown RBP6.16□□□□□ -1.42
RAD16YBR114W CWC22P53333 577 aaKnown RBP6.15□□□□□ -1.42
RAD16YBR114W SNT2P53127 1403 aa6.15□□□□□ -1.43
RAD16YBR114W AIM44Q99299 758 aa6.13□□□□□ -1.43
RAD16YBR114W SPO14P36126 1683 aa6.13□□□□□ -1.43
RAD16YBR114W YTA7P40340 1379 aa6.12□□□□□ -1.43
RAD16YBR114W DNF2Q12675 1612 aa6.12□□□□□ -1.43
RAD16YBR114W NUP170P38181 1502 aa6.12□□□□□ -1.43
RAD16YBR114W DEF1P35732 738 aaKnown RBP6.1□□□□□ -1.43
RAD16YBR114W ULS1Q08562 1619 aa6.09□□□□□ -1.43
RAD16YBR114W ABP1P15891 592 aaKnown RBP6.09□□□□□ -1.43
RAD16YBR114W MLP2P40457 1679 aa6.09□□□□□ -1.43
RAD16YBR114W PDR12Q02785 1511 aa6.09□□□□□ -1.44
RAD16YBR114W LEO1P38439 464 aa6.08□□□□□ -1.44
RAD16YBR114W STH1P32597 1359 aa6.07□□□□□ -1.44
RAD16YBR114W TCB2P48231 1178 aa6.07□□□□□ -1.44
RAD16YBR114W DOP1Q03921 1698 aa6.05□□□□□ -1.44
RAD16YBR114W MET10P39692 1035 aa6.04□□□□□ -1.44
RAD16YBR114W GDB1Q06625 1536 aa6.04□□□□□ -1.44
RAD16YBR114W TRM3Q07527 1436 aa6.02□□□□□ -1.45
RAD16YBR114W PSH1Q12161 406 aa6.01□□□□□ -1.45
RAD16YBR114W IQG1Q12280 1495 aa6.01□□□□□ -1.45
RAD16YBR114W YFR006WP43590 535 aa6.01□□□□□ -1.45
RAD16YBR114W ENV11P53246 860 aa6□□□□□ -1.45
RAD16YBR114W NUG1P40010 520 aaKnown RBP6□□□□□ -1.45
RAD16YBR114W RLF2Q12495 606 aa6□□□□□ -1.45
RAD16YBR114W BUD3P25558 1636 aa5.99□□□□□ -1.45
RAD16YBR114W PDR15Q04182 1529 aaKnown RBP5.99□□□□□ -1.45
RAD16YBR114W NOP53Q12080 455 aaKnown RBP5.99□□□□□ -1.45
RAD16YBR114W YOR093CQ12275 1648 aa5.99□□□□□ -1.45
RAD16YBR114W PDR10P51533 1564 aa5.98□□□□□ -1.45
RAD16YBR114W SNU71P53207 620 aaKnown RBP5.98□□□□□ -1.45
RAD16YBR114W TOP1P04786 769 aa5.98□□□□□ -1.45
RAD16YBR114W RTT106P40161 455 aa5.98□□□□□ -1.45
RAD16YBR114W CHC1P22137 1653 aaKnown RBP5.97□□□□□ -1.45
RAD16YBR114W QCR6P00127 147 aa5.97□□□□□ -1.45
RAD16YBR114W NUP157P40064 1391 aaKnown RBP5.97□□□□□ -1.45
RAD16YBR114W ARO1P08566 1588 aaKnown RBP5.94□□□□□ -1.46
RAD16YBR114W HSP82P02829 709 aaKnown RBP5.94□□□□□ -1.46
RAD16YBR114W RLP24Q07915 199 aaKnown RBP5.94□□□□□ -1.46
RAD16YBR114W SPT2P06843 333 aaPredicted RBP5.93□□□□□ -1.46
RAD16YBR114W PLP2Q12017 286 aa5.92□□□□□ -1.46
RAD16YBR114W SPT7P35177 1332 aa5.9□□□□□ -1.46
RAD16YBR114W YBT1P32386 1661 aa5.9□□□□□ -1.46
RAD16YBR114W FPR3P38911 411 aaKnown RBP5.9□□□□□ -1.46
RAD16YBR114W RIX1P38883 763 aaPredicted RBP5.89□□□□□ -1.47
RAD16YBR114W DNF3Q12674 1656 aa5.89□□□□□ -1.47
RAD16YBR114W CAT8P39113 1433 aa5.88□□□□□ -1.47
RAD16YBR114W ENP1P38333 483 aaKnown RBP5.88□□□□□ -1.47
RAD16YBR114W PRY3P47033 881 aa5.88□□□□□ -1.47
RAD16YBR114W RNA1P11745 407 aaKnown RBP5.88□□□□□ -1.47
RAD16YBR114W MDG1P53885 366 aa5.88□□□□□ -1.47
RAD16YBR114W SEC7P11075 2009 aaKnown RBP5.88□□□□□ -1.47
RAD16YBR114W DMA1P38823 416 aa5.87□□□□□ -1.47
RAD16YBR114W FUN12P39730 1002 aaKnown RBP5.87□□□□□ -1.47
RAD16YBR114W YGR130CP53278 816 aa5.87□□□□□ -1.47
RAD16YBR114W TY3B-GQ99315 1547 aa5.87□□□□□ -1.47
RAD16YBR114W IFH1P39520 1085 aa5.87□□□□□ -1.47
RAD16YBR114W FPR4Q06205 392 aaPredicted RBP5.87□□□□□ -1.47
RAD16YBR114W RPN1P38764 993 aaKnown RBP5.86□□□□□ -1.47
RAD16YBR114W SAS10Q12136 610 aaPredicted RBP5.85□□□□□ -1.47
RAD16YBR114W GEA1P47102 1408 aaPredicted RBP5.85□□□□□ -1.47
RAD16YBR114W RPS0AP32905 252 aaKnown RBP5.84□□□□□ -1.48
RAD16YBR114W YSP2Q06681 1438 aa5.82□□□□□ -1.48
RAD16YBR114W ORC1P54784 914 aaPredicted RBP5.81□□□□□ -1.48
RAD16YBR114W HIF1Q12373 385 aa5.81□□□□□ -1.48
RAD16YBR114W SEC3P33332 1336 aaKnown RBP5.8□□□□□ -1.48
RAD16YBR114W CLC1P17891 233 aa5.8□□□□□ -1.48
RAD16YBR114W SPT21P35209 758 aa5.8□□□□□ -1.48
RAD16YBR114W NMD2P38798 1089 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms