RNA–Protein interactions for RNA: YBR056W

YBR056W, Transcript of Putative glycoside hydrolase of the mitochondrial intermembrane space, yeastyeast

Gene YBR056W, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR056WYBR056W TY1B-GR1Q12141 1755 aa11.66□□□□□ -0.54
YBR056WYBR056W TY1B-BLQ12490 1755 aa11.66□□□□□ -0.54
YBR056WYBR056W DNF1P32660 1571 aa11.65□□□□□ -0.54
YBR056WYBR056W IKI3Q06706 1349 aaKnown RBP11.65□□□□□ -0.54
YBR056WYBR056W SNT2P53127 1403 aa11.62□□□□□ -0.55
YBR056WYBR056W RPA190P10964 1664 aaKnown RBP11.62□□□□□ -0.55
YBR056WYBR056W NTE1Q04958 1679 aa11.61□□□□□ -0.55
YBR056WYBR056W FAP1P53971 965 aa11.57□□□□□ -0.56
YBR056WYBR056W TY3B-GQ99315 1547 aa11.57□□□□□ -0.56
YBR056WYBR056W RPO21P04050 1733 aaKnown RBP11.56□□□□□ -0.56
YBR056WYBR056W NUP170P38181 1502 aa11.55□□□□□ -0.56
YBR056WYBR056W RTT106P40161 455 aa11.55□□□□□ -0.56
YBR056WYBR056W SSM4P40318 1319 aa11.54□□□□□ -0.56
YBR056WYBR056W GEA2P39993 1459 aaKnown RBP11.53□□□□□ -0.56
YBR056WYBR056W NUP159P40477 1460 aa11.51□□□□□ -0.57
YBR056WYBR056W IRC20Q06554 1556 aa11.49□□□□□ -0.57
YBR056WYBR056W YBT1P32386 1661 aa11.48□□□□□ -0.57
YBR056WYBR056W VPS15P22219 1454 aa11.46□□□□□ -0.57
YBR056WYBR056W CAT8P39113 1433 aa11.42□□□□□ -0.58
YBR056WYBR056W GDB1Q06625 1536 aa11.37□□□□□ -0.59
YBR056WYBR056W SPO14P36126 1683 aa11.37□□□□□ -0.59
YBR056WYBR056W YRF1-1P0CX20 1796 aa11.36□□□□□ -0.59
YBR056WYBR056W YRF1-5P0CX21 1796 aa11.36□□□□□ -0.59
YBR056WYBR056W YRF1-8P0CX22 1796 aa11.36□□□□□ -0.59
YBR056WYBR056W MET5P47169 1442 aa11.36□□□□□ -0.59
YBR056WYBR056W PDR10P51533 1564 aa11.35□□□□□ -0.59
YBR056WYBR056W ARO1P08566 1588 aaKnown RBP11.34□□□□□ -0.59
YBR056WYBR056W PDR12Q02785 1511 aa11.34□□□□□ -0.59
YBR056WYBR056W NUP157P40064 1391 aaKnown RBP11.33□□□□□ -0.6
YBR056WYBR056W MET10P39692 1035 aa11.33□□□□□ -0.6
YBR056WYBR056W CKB1P43639 278 aa11.32□□□□□ -0.6
YBR056WYBR056W SRB8P25648 1427 aa11.29□□□□□ -0.6
YBR056WYBR056W BUD3P25558 1636 aa11.26□□□□□ -0.61
YBR056WYBR056W IQG1Q12280 1495 aa11.18□□□□□ -0.62
YBR056WYBR056W YSP2Q06681 1438 aa11.17□□□□□ -0.62
YBR056WYBR056W BUD21Q08492 214 aaPredicted RBP11.16□□□□□ -0.62
YBR056WYBR056W GCN2P15442 1659 aa11.13□□□□□ -0.63
YBR056WYBR056W MMS1Q06211 1407 aa11.12□□□□□ -0.63
YBR056WYBR056W LTE1P07866 1435 aa11.1□□□□□ -0.63
YBR056WYBR056W BNR1P40450 1375 aa11.08□□□□□ -0.64
YBR056WYBR056W DRS2P39524 1355 aa11.02□□□□□ -0.64
YBR056WYBR056W POL5P39985 1022 aaKnown RBP11.02□□□□□ -0.65
YBR056WYBR056W NOP7P53261 605 aaKnown RBP11.02□□□□□ -0.65
YBR056WYBR056W YOR093CQ12275 1648 aa11.01□□□□□ -0.65
YBR056WYBR056W DOP1Q03921 1698 aa11□□□□□ -0.65
YBR056WYBR056W TRM3Q07527 1436 aa10.99□□□□□ -0.65
YBR056WYBR056W CHC1P22137 1653 aaKnown RBP10.98□□□□□ -0.65
YBR056WYBR056W SEC7P11075 2009 aaKnown RBP10.95□□□□□ -0.66
YBR056WYBR056W PDR5P33302 1511 aaKnown RBP10.95□□□□□ -0.66
YBR056WYBR056W PAF1P38351 445 aa10.94□□□□□ -0.66
YBR056WYBR056W VMR1P38735 1592 aa10.92□□□□□ -0.66
YBR056WYBR056W BFR2Q06631 534 aaKnown RBP10.9□□□□□ -0.66
YBR056WYBR056W ITT1Q04638 464 aa10.89□□□□□ -0.67
YBR056WYBR056W PRY3P47033 881 aa10.88□□□□□ -0.67
YBR056WYBR056W IML1P47170 1584 aa10.87□□□□□ -0.67
YBR056WYBR056W NUP188P52593 1655 aaKnown RBP10.86□□□□□ -0.67
YBR056WYBR056W PDR11P40550 1411 aa10.86□□□□□ -0.67
YBR056WYBR056W BNI1P41832 1953 aa10.85□□□□□ -0.67
YBR056WYBR056W ORC1P54784 914 aaPredicted RBP10.84□□□□□ -0.67
YBR056WYBR056W RAV1P47104 1357 aa10.83□□□□□ -0.68
YBR056WYBR056W DNF2Q12675 1612 aa10.82□□□□□ -0.68
YBR056WYBR056W NSR1P27476 414 aaKnown RBP RIP-Chip data10.8□□□□□ -0.68not detected
YBR056WYBR056W RTC1Q08281 1341 aa10.79□□□□□ -0.68
YBR056WYBR056W SPT7P35177 1332 aa10.77□□□□□ -0.68
YBR056WYBR056W TAF5P38129 798 aa10.77□□□□□ -0.69
YBR056WYBR056W SEC3P33332 1336 aaKnown RBP10.74□□□□□ -0.69
YBR056WYBR056W TY3B-IQ7LHG5 1498 aaKnown RBP10.72□□□□□ -0.69
YBR056WYBR056W MHP1P43638 1398 aa10.72□□□□□ -0.69
YBR056WYBR056W TYS1P36421 394 aaKnown RBP10.72□□□□□ -0.69
YBR056WYBR056W NUP192P47054 1683 aa10.72□□□□□ -0.69
YBR056WYBR056W LEU3P08638 886 aa10.69□□□□□ -0.7
YBR056WYBR056W ENP1P38333 483 aaKnown RBP10.69□□□□□ -0.7
YBR056WYBR056W IPL1P38991 367 aa10.69□□□□□ -0.7
YBR056WYBR056W ESL2P36168 1195 aa10.68□□□□□ -0.7
YBR056WYBR056W KIP3P53086 805 aaKnown RBP10.68□□□□□ -0.7
YBR056WYBR056W URN1Q06525 465 aaKnown RBP10.68□□□□□ -0.7
YBR056WYBR056W YLR419WQ06698 1435 aaKnown RBP10.67□□□□□ -0.7
YBR056WYBR056W PSD2P53037 1138 aaKnown RBP10.64□□□□□ -0.71
YBR056WYBR056W YAP3P38749 330 aa10.62□□□□□ -0.71
YBR056WYBR056W RAD9P14737 1309 aa10.6□□□□□ -0.71
YBR056WYBR056W PDS5Q04264 1277 aa10.58□□□□□ -0.72
YBR056WYBR056W SPE2P21182 396 aa10.58□□□□□ -0.72
YBR056WYBR056W TAF8Q03750 510 aa10.56□□□□□ -0.72
YBR056WYBR056W BCK1Q01389 1478 aa10.56□□□□□ -0.72
YBR056WYBR056W DNF3Q12674 1656 aa10.56□□□□□ -0.72
YBR056WYBR056W CAB1Q04430 367 aa10.55□□□□□ -0.72
YBR056WYBR056W ALD4P46367 519 aaKnown RBP10.54□□□□□ -0.72
YBR056WYBR056W NST1P53935 1240 aa10.52□□□□□ -0.73
YBR056WYBR056W KRE5P22023 1365 aa10.5□□□□□ -0.73
YBR056WYBR056W HAP1P0CE41 1502 aa10.49□□□□□ -0.73
YBR056WYBR056W SCT1P32784 759 aa10.48□□□□□ -0.73
YBR056WYBR056W NOP2P40991 618 aaKnown RBP10.48□□□□□ -0.73
YBR056WYBR056W NAP1P25293 417 aaKnown RBP10.47□□□□□ -0.73
YBR056WYBR056W MRX12P47084 519 aa10.47□□□□□ -0.73
YBR056WYBR056W RTG3P38165 486 aa10.46□□□□□ -0.74
YBR056WYBR056W CHZ1P40019 153 aaPredicted RBP10.46□□□□□ -0.74
YBR056WYBR056W ABP1P15891 592 aaKnown RBP10.45□□□□□ -0.74
YBR056WYBR056W PRS1P32895 427 aaKnown RBP10.44□□□□□ -0.74
YBR056WYBR056W RIA1P53893 1110 aa10.43□□□□□ -0.74
YBR056WYBR056W MAK10Q02197 733 aa10.4□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms