RNA–Protein interactions for RNA: YAL014C

SYN8, Transcript of Endosomal SNARE related to mammalian syntaxin 8, yeastyeast

Gene SYN8, Length 768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SYN8YAL014C POL1P13382 1468 aa9.28□□□□□ -0.92
SYN8YAL014C VPS15P22219 1454 aa9.28□□□□□ -0.92
SYN8YAL014C YRF1-1P0CX20 1796 aa9.27□□□□□ -0.92
SYN8YAL014C YRF1-5P0CX21 1796 aa9.27□□□□□ -0.92
SYN8YAL014C YRF1-8P0CX22 1796 aa9.27□□□□□ -0.92
SYN8YAL014C DRS2P39524 1355 aa9.27□□□□□ -0.93
SYN8YAL014C SPP41P38904 1435 aa9.26□□□□□ -0.93
SYN8YAL014C YFR006WP43590 535 aa9.26□□□□□ -0.93
SYN8YAL014C TSR3Q12094 313 aaKnown RBP9.25□□□□□ -0.93
SYN8YAL014C NTE1Q04958 1679 aa9.25□□□□□ -0.93
SYN8YAL014C YOR1P53049 1477 aa9.24□□□□□ -0.93
SYN8YAL014C STU1P38198 1513 aa9.24□□□□□ -0.93
SYN8YAL014C SMC4Q12267 1418 aa9.23□□□□□ -0.93
SYN8YAL014C REB1P21538 810 aa9.23□□□□□ -0.93
SYN8YAL014C TY1B-JR2P47100 1755 aaKnown RBP9.2□□□□□ -0.94
SYN8YAL014C TY1B-ER2Q03619 1755 aa9.2□□□□□ -0.94
SYN8YAL014C TY1B-MR1Q04214 1755 aa9.2□□□□□ -0.94
SYN8YAL014C TY1B-MR2Q04670 1755 aaKnown RBP9.2□□□□□ -0.94
SYN8YAL014C TY1B-LR1Q12088 1755 aaKnown RBP9.2□□□□□ -0.94
SYN8YAL014C TY1B-NL1Q12112 1755 aa9.2□□□□□ -0.94
SYN8YAL014C TY1B-GR1Q12141 1755 aa9.2□□□□□ -0.94
SYN8YAL014C TY1B-BLQ12490 1755 aa9.2□□□□□ -0.94
SYN8YAL014C VTH1P40438 1549 aa9.19□□□□□ -0.94
SYN8YAL014C VTH2P40890 1549 aa9.19□□□□□ -0.94
SYN8YAL014C IRC20Q06554 1556 aa9.19□□□□□ -0.94
SYN8YAL014C TSC11P40061 1430 aa9.18□□□□□ -0.94
SYN8YAL014C RPO21P04050 1733 aaKnown RBP9.17□□□□□ -0.94
SYN8YAL014C DNF2Q12675 1612 aa9.13□□□□□ -0.95
SYN8YAL014C NUP170P38181 1502 aa9.1□□□□□ -0.95
SYN8YAL014C MYO4P32492 1471 aa9.08□□□□□ -0.96
SYN8YAL014C SNQ2P32568 1501 aaKnown RBP9.05□□□□□ -0.96
SYN8YAL014C ULS1Q08562 1619 aa9.04□□□□□ -0.96
SYN8YAL014C SPO14P36126 1683 aa9.04□□□□□ -0.96
SYN8YAL014C SNT2P53127 1403 aa9.03□□□□□ -0.96
SYN8YAL014C SPT21P35209 758 aa9.02□□□□□ -0.97
SYN8YAL014C DOP1Q03921 1698 aa9□□□□□ -0.97
SYN8YAL014C RIM101P33400 625 aa8.99□□□□□ -0.97
SYN8YAL014C MET10P39692 1035 aa8.98□□□□□ -0.97
SYN8YAL014C PTP3P40048 928 aa8.98□□□□□ -0.97
SYN8YAL014C DMA1P38823 416 aa8.97□□□□□ -0.97
SYN8YAL014C YOR093CQ12275 1648 aa8.95□□□□□ -0.98
SYN8YAL014C RTT106P40161 455 aa8.95□□□□□ -0.98
SYN8YAL014C STH1P32597 1359 aa8.94□□□□□ -0.98
SYN8YAL014C YTA7P40340 1379 aa8.93□□□□□ -0.98
SYN8YAL014C MRPL32P25348 183 aa8.92□□□□□ -0.98
SYN8YAL014C PDR10P51533 1564 aa8.9□□□□□ -0.98
SYN8YAL014C PDR12Q02785 1511 aa8.9□□□□□ -0.98
SYN8YAL014C IQG1Q12280 1495 aa8.9□□□□□ -0.98
SYN8YAL014C TRM3Q07527 1436 aa8.9□□□□□ -0.98
SYN8YAL014C GDB1Q06625 1536 aa8.89□□□□□ -0.99
SYN8YAL014C NUP157P40064 1391 aaKnown RBP8.87□□□□□ -0.99
SYN8YAL014C MLP2P40457 1679 aa8.87□□□□□ -0.99
SYN8YAL014C BUD3P25558 1636 aa8.8□□□□□ -1
SYN8YAL014C PDR15Q04182 1529 aaKnown RBP8.8□□□□□ -1
SYN8YAL014C SSP1P38871 571 aa8.79□□□□□ -1
SYN8YAL014C CHC1P22137 1653 aaKnown RBP8.78□□□□□ -1
SYN8YAL014C OXP1P28273 1286 aa8.78□□□□□ -1
SYN8YAL014C ARO1P08566 1588 aaKnown RBP8.77□□□□□ -1.01
SYN8YAL014C DNF3Q12674 1656 aa8.74□□□□□ -1.01
SYN8YAL014C SAS10Q12136 610 aaPredicted RBP8.73□□□□□ -1.01
SYN8YAL014C IFH1P39520 1085 aa8.69□□□□□ -1.02
SYN8YAL014C YGL015CP33199 130 aa8.65□□□□□ -1.02
SYN8YAL014C YAH1Q12184 172 aaKnown RBP8.65□□□□□ -1.02
SYN8YAL014C YKR023WP36119 530 aaKnown RBP8.63□□□□□ -1.03
SYN8YAL014C YAP3P38749 330 aa8.61□□□□□ -1.03
SYN8YAL014C YIL055CP40523 627 aaKnown RBP8.59□□□□□ -1.03
SYN8YAL014C CKB1P43639 278 aa8.59□□□□□ -1.03
SYN8YAL014C TAF7Q05021 590 aa8.59□□□□□ -1.03
SYN8YAL014C CAT8P39113 1433 aa8.59□□□□□ -1.03
SYN8YAL014C TY3B-GQ99315 1547 aa8.59□□□□□ -1.03
SYN8YAL014C YLR271WQ06152 274 aa8.58□□□□□ -1.04
SYN8YAL014C YBT1P32386 1661 aa8.58□□□□□ -1.04
SYN8YAL014C BNR1P40450 1375 aa8.58□□□□□ -1.04
SYN8YAL014C MAK10Q02197 733 aa8.57□□□□□ -1.04
SYN8YAL014C SEC7P11075 2009 aaKnown RBP8.57□□□□□ -1.04
SYN8YAL014C GEA1P47102 1408 aaPredicted RBP8.56□□□□□ -1.04
SYN8YAL014C YSP2Q06681 1438 aa8.56□□□□□ -1.04
SYN8YAL014C USO1P25386 1790 aa8.54□□□□□ -1.04
SYN8YAL014C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
SYN8YAL014C URN1Q06525 465 aaKnown RBP8.47□□□□□ -1.05
SYN8YAL014C TFC8Q12308 588 aa8.46□□□□□ -1.06
SYN8YAL014C HOP09932 586 aa8.45□□□□□ -1.06
SYN8YAL014C RSM7P47150 247 aa8.45□□□□□ -1.06
SYN8YAL014C IML1P47170 1584 aa8.42□□□□□ -1.06
SYN8YAL014C MGA2P40578 1113 aa8.41□□□□□ -1.06
SYN8YAL014C THI12P42883 340 aa8.41□□□□□ -1.06
SYN8YAL014C THI5P43534 340 aa8.41□□□□□ -1.06
SYN8YAL014C THI11P47183 340 aa8.41□□□□□ -1.06
SYN8YAL014C THI13Q07748 340 aa8.41□□□□□ -1.06
SYN8YAL014C DCD1P06773 312 aa8.39□□□□□ -1.07
SYN8YAL014C CDC27P38042 758 aa8.38□□□□□ -1.07
SYN8YAL014C NUP188P52593 1655 aaKnown RBP8.37□□□□□ -1.07
SYN8YAL014C IPL1P38991 367 aa8.36□□□□□ -1.07
SYN8YAL014C CST9Q06032 482 aa8.36□□□□□ -1.07
SYN8YAL014C SRB8P25648 1427 aa8.36□□□□□ -1.07
SYN8YAL014C TY1B-NL2Q99337 1749 aaKnown RBP8.35□□□□□ -1.07
SYN8YAL014C LEO1P38439 464 aa8.35□□□□□ -1.07
SYN8YAL014C YMR196WQ04336 1088 aa8.35□□□□□ -1.07
SYN8YAL014C VMR1P38735 1592 aa8.35□□□□□ -1.07
SYN8YAL014C TYS1P36421 394 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms