RNA–Protein interactions for RNA: ENST00000642102.1

CASC19-280, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-280ENST00000642102 SCUBE2Q9NQ36 999 aa13.97□□□□□ -0.17
CASC19-280ENST00000642102 ASTLQ6HA08 431 aaPredicted RBP13.96□□□□□ -0.18
CASC19-280ENST00000642102 ATMINO43313 823 aaPredicted RBP13.91□□□□□ -0.18
CASC19-280ENST00000642102 CDAN1Q8IWY9 1227 aa13.89□□□□□ -0.19
CASC19-280ENST00000642102 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
CASC19-280ENST00000642102 MS4A3Q96HJ5 214 aa13.83□□□□□ -0.2
CASC19-280ENST00000642102 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
CASC19-280ENST00000642102 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
CASC19-280ENST00000642102 POTEFA5A3E0 1075 aa13.64□□□□□ -0.23
CASC19-280ENST00000642102 MMRN1Q13201 1228 aa13.64□□□□□ -0.23
CASC19-280ENST00000642102 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
CASC19-280ENST00000642102 SPNS2Q8IVW8 549 aa13.56□□□□□ -0.24
CASC19-280ENST00000642102 ST18O60284 1047 aa13.53□□□□□ -0.24
CASC19-280ENST00000642102 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
CASC19-280ENST00000642102 SEC24BO95487 1268 aa13.52□□□□□ -0.25
CASC19-280ENST00000642102 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
CASC19-280ENST00000642102 COLQQ9Y215 455 aaPredicted RBP13.47□□□□□ -0.25
CASC19-280ENST00000642102 SLAIN1Q8ND83 568 aa13.45□□□□□ -0.26
CASC19-280ENST00000642102 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
CASC19-280ENST00000642102 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
CASC19-280ENST00000642102 TIE1P35590 1138 aa13.44□□□□□ -0.26
CASC19-280ENST00000642102 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
CASC19-280ENST00000642102 SPDYE4A6NLX3 237 aa13.35□□□□□ -0.27
CASC19-280ENST00000642102 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.27
CASC19-280ENST00000642102 TMEM121BQ9BXQ6 578 aaPredicted RBP13.33□□□□□ -0.27
CASC19-280ENST00000642102 MAP3K13O43283 966 aa13.32□□□□□ -0.28
CASC19-280ENST00000642102 IER5LQ5T953 404 aa13.32□□□□□ -0.28
CASC19-280ENST00000642102 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
CASC19-280ENST00000642102 MARVELD3Q96A59 401 aa13.21□□□□□ -0.29
CASC19-280ENST00000642102 SNPHO15079 494 aa13.2□□□□□ -0.3
CASC19-280ENST00000642102 PLCG2P16885 1265 aa13.16□□□□□ -0.3
CASC19-280ENST00000642102 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
CASC19-280ENST00000642102 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.31
CASC19-280ENST00000642102 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
CASC19-280ENST00000642102 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
CASC19-280ENST00000642102 EMP3P54852 163 aa13.05□□□□□ -0.32
CASC19-280ENST00000642102 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
CASC19-280ENST00000642102 KRTAP3-3Q9BYR6 98 aa13.04□□□□□ -0.32
CASC19-280ENST00000642102 KRTAP3-2Q9BYR7 98 aa13.04□□□□□ -0.32
CASC19-280ENST00000642102 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
CASC19-280ENST00000642102 TMEM106CQ9BVX2 250 aa13.01□□□□□ -0.33
CASC19-280ENST00000642102 PLEKHG5O94827 1062 aa13□□□□□ -0.33
CASC19-280ENST00000642102 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
CASC19-280ENST00000642102 HS3ST6Q96QI5 342 aa12.97□□□□□ -0.33
CASC19-280ENST00000642102 OCEL1Q9H607 264 aa12.95□□□□□ -0.34
CASC19-280ENST00000642102 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
CASC19-280ENST00000642102 IFNL1Q8IU54 200 aa12.94□□□□□ -0.34
CASC19-280ENST00000642102 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
CASC19-280ENST00000642102 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
CASC19-280ENST00000642102 MIER1Q8N108 512 aa12.9□□□□□ -0.34
CASC19-280ENST00000642102 RNF166Q96A37 237 aaPredicted RBP12.81□□□□□ -0.36
CASC19-280ENST00000642102 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
CASC19-280ENST00000642102 PROM2Q8N271 834 aa12.8□□□□□ -0.36
CASC19-280ENST00000642102 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
CASC19-280ENST00000642102 NUBP1P53384 320 aa12.69□□□□□ -0.38
CASC19-280ENST00000642102 PLCD3Q8N3E9 789 aa12.68□□□□□ -0.38
CASC19-280ENST00000642102 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
CASC19-280ENST00000642102 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
CASC19-280ENST00000642102 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
CASC19-280ENST00000642102 PDCD7Q8N8D1 485 aaKnown RBP12.64□□□□□ -0.39
CASC19-280ENST00000642102 ERBB3P21860 1342 aa12.59□□□□□ -0.39
CASC19-280ENST00000642102 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
CASC19-280ENST00000642102 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
CASC19-280ENST00000642102 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
CASC19-280ENST00000642102 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
CASC19-280ENST00000642102 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
CASC19-280ENST00000642102 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
CASC19-280ENST00000642102 PYGBP11216 843 aa12.5□□□□□ -0.41
CASC19-280ENST00000642102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.417e-8■□□□□ 10.2
CASC19-280ENST00000642102 PTGER2P43116 358 aa12.47□□□□□ -0.41
CASC19-280ENST00000642102 VARS2Q5ST30 1063 aaKnown RBP12.45□□□□□ -0.42
CASC19-280ENST00000642102 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
CASC19-280ENST00000642102 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
CASC19-280ENST00000642102 ZNF687Q8N1G0 1237 aa12.39□□□□□ -0.43
CASC19-280ENST00000642102 G3V3G9 751 aa12.38□□□□□ -0.43
CASC19-280ENST00000642102 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
CASC19-280ENST00000642102 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
CASC19-280ENST00000642102 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
CASC19-280ENST00000642102 ZNF467Q7Z7K2 595 aaPredicted RBP12.32□□□□□ -0.44
CASC19-280ENST00000642102 PLA2G2EQ9NZK7 142 aa12.32□□□□□ -0.44
CASC19-280ENST00000642102 ANKRD13DQ6ZTN6 518 aa12.3□□□□□ -0.44
CASC19-280ENST00000642102 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
CASC19-280ENST00000642102 PSEN1P49768 467 aa12.24□□□□□ -0.45
CASC19-280ENST00000642102 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
CASC19-280ENST00000642102 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
CASC19-280ENST00000642102 LSM11P83369 360 aaKnown RBP eCLIP12.14□□□□□ -0.47
CASC19-280ENST00000642102 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
CASC19-280ENST00000642102 GSE1Q14687 1217 aa12.1□□□□□ -0.47
CASC19-280ENST00000642102 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
CASC19-280ENST00000642102 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
CASC19-280ENST00000642102 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
CASC19-280ENST00000642102 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
CASC19-280ENST00000642102 ARSIQ5FYB1 569 aa12.03□□□□□ -0.48
CASC19-280ENST00000642102 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
CASC19-280ENST00000642102 IRX2Q9BZI1 471 aaPredicted RBP11.98□□□□□ -0.49
CASC19-280ENST00000642102 PBX2P40425 430 aa11.96□□□□□ -0.49
CASC19-280ENST00000642102 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
CASC19-280ENST00000642102 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■□□□□ 10.6
CASC19-280ENST00000642102 RGS20O76081 388 aa11.9□□□□□ -0.5
CASC19-280ENST00000642102 FKBP8Q14318 412 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms