RNA–Protein interactions for RNA: ENST00000642102.1

CASC19-280, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-280ENST00000642102 AEBP2Q6ZN18 517 aaPredicted RBP28.95■■■□□ 2.22
CASC19-280ENST00000642102 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
CASC19-280ENST00000642102 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
CASC19-280ENST00000642102 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
CASC19-280ENST00000642102 POTEDQ86YR6 584 aa23.44■■□□□ 1.34
CASC19-280ENST00000642102 FOXD1Q16676 465 aa23.32■■□□□ 1.32
CASC19-280ENST00000642102 MSH5O43196 834 aa22.27■■□□□ 1.16
CASC19-280ENST00000642102 PIAS4Q8N2W9 510 aaPredicted RBP21.59■■□□□ 1.05
CASC19-280ENST00000642102 PPP6R1Q9UPN7 881 aa21■□□□□ 0.95
CASC19-280ENST00000642102 ADRA2BP18089 450 aa20.9■□□□□ 0.94
CASC19-280ENST00000642102 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
CASC19-280ENST00000642102 CACNB1Q02641 598 aaPredicted RBP19.76■□□□□ 0.75
CASC19-280ENST00000642102 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
CASC19-280ENST00000642102 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
CASC19-280ENST00000642102 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
CASC19-280ENST00000642102 DCAF8L1A6NGE4 600 aa18.92■□□□□ 0.62
CASC19-280ENST00000642102 RNF39Q9H2S5 420 aa18.87■□□□□ 0.61
CASC19-280ENST00000642102 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
CASC19-280ENST00000642102 HOXD11P31277 338 aaPredicted RBP18.45■□□□□ 0.54
CASC19-280ENST00000642102 POTEHQ6S545 545 aa18.19■□□□□ 0.5
CASC19-280ENST00000642102 PPP4R3CPQ6ZMV5 832 aa18.06■□□□□ 0.48
CASC19-280ENST00000642102 RNF216Q9NWF9 866 aaPredicted RBP18.06■□□□□ 0.48
CASC19-280ENST00000642102 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
CASC19-280ENST00000642102 CNKSR2Q8WXI2 1034 aa17.97■□□□□ 0.47
CASC19-280ENST00000642102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
CASC19-280ENST00000642102 DSG3P32926 999 aa17.33■□□□□ 0.36
CASC19-280ENST00000642102 CAPN15O75808 1086 aa17.24■□□□□ 0.35
CASC19-280ENST00000642102 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
CASC19-280ENST00000642102 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
CASC19-280ENST00000642102 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
CASC19-280ENST00000642102 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
CASC19-280ENST00000642102 ABCB7O75027 752 aa16.72■□□□□ 0.27
CASC19-280ENST00000642102 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
CASC19-280ENST00000642102 CHRDL2Q6WN34 429 aa16.64■□□□□ 0.25
CASC19-280ENST00000642102 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
CASC19-280ENST00000642102 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
CASC19-280ENST00000642102 APLP2Q06481 763 aa16.6■□□□□ 0.25
CASC19-280ENST00000642102 SP7Q8TDD2 431 aaPredicted RBP16.56■□□□□ 0.24
CASC19-280ENST00000642102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
CASC19-280ENST00000642102 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
CASC19-280ENST00000642102 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
CASC19-280ENST00000642102 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
CASC19-280ENST00000642102 HAX1O00165 279 aa16.04■□□□□ 0.16
CASC19-280ENST00000642102 POLA2Q14181 598 aa16.02■□□□□ 0.16
CASC19-280ENST00000642102 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
CASC19-280ENST00000642102 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
CASC19-280ENST00000642102 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.12
CASC19-280ENST00000642102 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
CASC19-280ENST00000642102 EVX2Q03828 476 aa15.69■□□□□ 0.1
CASC19-280ENST00000642102 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
CASC19-280ENST00000642102 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
CASC19-280ENST00000642102 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
CASC19-280ENST00000642102 KCNA4P22459 653 aa15.56■□□□□ 0.08
CASC19-280ENST00000642102 LHX8Q68G74 356 aa15.54■□□□□ 0.08
CASC19-280ENST00000642102 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
CASC19-280ENST00000642102 PLSCR2Q9NRY7 297 aa15.45■□□□□ 0.06
CASC19-280ENST00000642102 GABBR2O75899 941 aa15.31■□□□□ 0.04
CASC19-280ENST00000642102 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
CASC19-280ENST00000642102 C19orf67A6NJJ6 358 aa15.26■□□□□ 0.03
CASC19-280ENST00000642102 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
CASC19-280ENST00000642102 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
CASC19-280ENST00000642102 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
CASC19-280ENST00000642102 SPDYE2BA6NHP3 402 aa15.04■□□□□ -0
CASC19-280ENST00000642102 SPDYE6P0CI01 402 aa15.04■□□□□ -0
CASC19-280ENST00000642102 SPDYE2Q495Y8 402 aa15.04■□□□□ -0
CASC19-280ENST00000642102 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
CASC19-280ENST00000642102 CHADLQ6NUI6 762 aa14.86□□□□□ -0.03
CASC19-280ENST00000642102 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
CASC19-280ENST00000642102 FBLN2P98095 1184 aa14.82□□□□□ -0.04
CASC19-280ENST00000642102 CLCN6P51797 869 aa14.75□□□□□ -0.05
CASC19-280ENST00000642102 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
CASC19-280ENST00000642102 DCBLD2Q96PD2 775 aa14.73□□□□□ -0.05
CASC19-280ENST00000642102 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
CASC19-280ENST00000642102 PRR29P0C7W0 189 aa14.7□□□□□ -0.06
CASC19-280ENST00000642102 POTEMA6NI47 508 aa14.69□□□□□ -0.06
CASC19-280ENST00000642102 SSUH2Q9Y2M2 353 aa14.69□□□□□ -0.06
CASC19-280ENST00000642102 POTEGQ6S5H5 508 aa14.6□□□□□ -0.07
CASC19-280ENST00000642102 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
CASC19-280ENST00000642102 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
CASC19-280ENST00000642102 PCDH10Q9P2E7 1040 aa14.53□□□□□ -0.08
CASC19-280ENST00000642102 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
CASC19-280ENST00000642102 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
CASC19-280ENST00000642102 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
CASC19-280ENST00000642102 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
CASC19-280ENST00000642102 POTEB2H3BUK9 544 aa14.43□□□□□ -0.1
CASC19-280ENST00000642102 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
CASC19-280ENST00000642102 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
CASC19-280ENST00000642102 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
CASC19-280ENST00000642102 ZBTB22O15209 634 aa14.24□□□□□ -0.13
CASC19-280ENST00000642102 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
CASC19-280ENST00000642102 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
CASC19-280ENST00000642102 MAMSTRQ6ZN01 415 aa14.1□□□□□ -0.15
CASC19-280ENST00000642102 LCE2DQ5TA82 110 aaPredicted RBP14.09□□□□□ -0.15
CASC19-280ENST00000642102 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
CASC19-280ENST00000642102 METRNQ9UJH8 293 aa14.07□□□□□ -0.16
CASC19-280ENST00000642102 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
CASC19-280ENST00000642102 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
CASC19-280ENST00000642102 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
CASC19-280ENST00000642102 C7P10643 843 aa14.01□□□□□ -0.17
CASC19-280ENST00000642102 SLC39A7Q92504 469 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms