RNA–Protein interactions for RNA: ENST00000642102.1

CASC19-280, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,351 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-280ENST00000642102 AEBP2Q6ZN18 517 aaPredicted RBP28.95■■■□□ 2.22
CASC19-280ENST00000642102 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
CASC19-280ENST00000642102 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
CASC19-280ENST00000642102 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.5
CASC19-280ENST00000642102 POTEDQ86YR6 584 aa23.44■■□□□ 1.34
CASC19-280ENST00000642102 FOXD1Q16676 465 aa23.32■■□□□ 1.32
CASC19-280ENST00000642102 MSH5O43196 834 aa22.27■■□□□ 1.16
CASC19-280ENST00000642102 PIAS4Q8N2W9 510 aaPredicted RBP21.59■■□□□ 1.05
CASC19-280ENST00000642102 PPP6R1Q9UPN7 881 aa21■□□□□ 0.95
CASC19-280ENST00000642102 ADRA2BP18089 450 aa20.9■□□□□ 0.94
CASC19-280ENST00000642102 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
CASC19-280ENST00000642102 CACNB1Q02641 598 aaPredicted RBP19.76■□□□□ 0.75
CASC19-280ENST00000642102 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
CASC19-280ENST00000642102 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
CASC19-280ENST00000642102 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
CASC19-280ENST00000642102 DCAF8L1A6NGE4 600 aa18.92■□□□□ 0.62
CASC19-280ENST00000642102 RNF39Q9H2S5 420 aa18.87■□□□□ 0.61
CASC19-280ENST00000642102 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
CASC19-280ENST00000642102 HOXD11P31277 338 aaPredicted RBP18.45■□□□□ 0.54
CASC19-280ENST00000642102 POTEHQ6S545 545 aa18.19■□□□□ 0.5
CASC19-280ENST00000642102 PPP4R3CPQ6ZMV5 832 aa18.06■□□□□ 0.48
CASC19-280ENST00000642102 RNF216Q9NWF9 866 aaPredicted RBP18.06■□□□□ 0.48
CASC19-280ENST00000642102 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
CASC19-280ENST00000642102 CNKSR2Q8WXI2 1034 aa17.97■□□□□ 0.47
CASC19-280ENST00000642102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
CASC19-280ENST00000642102 DSG3P32926 999 aa17.33■□□□□ 0.36
CASC19-280ENST00000642102 CAPN15O75808 1086 aa17.24■□□□□ 0.35
CASC19-280ENST00000642102 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
CASC19-280ENST00000642102 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
CASC19-280ENST00000642102 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
CASC19-280ENST00000642102 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
CASC19-280ENST00000642102 ABCB7O75027 752 aa16.72■□□□□ 0.27
CASC19-280ENST00000642102 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
CASC19-280ENST00000642102 CHRDL2Q6WN34 429 aa16.64■□□□□ 0.25
CASC19-280ENST00000642102 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
CASC19-280ENST00000642102 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
CASC19-280ENST00000642102 APLP2Q06481 763 aa16.6■□□□□ 0.25
CASC19-280ENST00000642102 SP7Q8TDD2 431 aaPredicted RBP16.56■□□□□ 0.24
CASC19-280ENST00000642102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
CASC19-280ENST00000642102 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
CASC19-280ENST00000642102 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
CASC19-280ENST00000642102 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
CASC19-280ENST00000642102 HAX1O00165 279 aa16.04■□□□□ 0.16
CASC19-280ENST00000642102 POLA2Q14181 598 aa16.02■□□□□ 0.16
CASC19-280ENST00000642102 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
CASC19-280ENST00000642102 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
CASC19-280ENST00000642102 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.12
CASC19-280ENST00000642102 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
CASC19-280ENST00000642102 EVX2Q03828 476 aa15.69■□□□□ 0.1
CASC19-280ENST00000642102 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
CASC19-280ENST00000642102 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
CASC19-280ENST00000642102 MYCNP04198 464 aaPredicted RBP15.58■□□□□ 0.08
CASC19-280ENST00000642102 KCNA4P22459 653 aa15.56■□□□□ 0.08
CASC19-280ENST00000642102 LHX8Q68G74 356 aa15.54■□□□□ 0.08
CASC19-280ENST00000642102 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
CASC19-280ENST00000642102 PLSCR2Q9NRY7 297 aa15.45■□□□□ 0.06
CASC19-280ENST00000642102 GABBR2O75899 941 aa15.31■□□□□ 0.04
CASC19-280ENST00000642102 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
CASC19-280ENST00000642102 C19orf67A6NJJ6 358 aa15.26■□□□□ 0.03
CASC19-280ENST00000642102 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
CASC19-280ENST00000642102 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
CASC19-280ENST00000642102 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
CASC19-280ENST00000642102 SPDYE2BA6NHP3 402 aa15.04■□□□□ -0
CASC19-280ENST00000642102 SPDYE6P0CI01 402 aa15.04■□□□□ -0
CASC19-280ENST00000642102 SPDYE2Q495Y8 402 aa15.04■□□□□ -0
CASC19-280ENST00000642102 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
CASC19-280ENST00000642102 CHADLQ6NUI6 762 aa14.86□□□□□ -0.03
CASC19-280ENST00000642102 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
CASC19-280ENST00000642102 FBLN2P98095 1184 aa14.82□□□□□ -0.04
CASC19-280ENST00000642102 CLCN6P51797 869 aa14.75□□□□□ -0.05
CASC19-280ENST00000642102 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
CASC19-280ENST00000642102 DCBLD2Q96PD2 775 aa14.73□□□□□ -0.05
CASC19-280ENST00000642102 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
CASC19-280ENST00000642102 PRR29P0C7W0 189 aa14.7□□□□□ -0.06
CASC19-280ENST00000642102 POTEMA6NI47 508 aa14.69□□□□□ -0.06
CASC19-280ENST00000642102 SSUH2Q9Y2M2 353 aa14.69□□□□□ -0.06
CASC19-280ENST00000642102 POTEGQ6S5H5 508 aa14.6□□□□□ -0.07
CASC19-280ENST00000642102 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
CASC19-280ENST00000642102 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
CASC19-280ENST00000642102 PCDH10Q9P2E7 1040 aa14.53□□□□□ -0.08
CASC19-280ENST00000642102 SLC4A1APQ9BWU0 796 aaKnown RBP14.51□□□□□ -0.09
CASC19-280ENST00000642102 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
CASC19-280ENST00000642102 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
CASC19-280ENST00000642102 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
CASC19-280ENST00000642102 POTEB2H3BUK9 544 aa14.43□□□□□ -0.1
CASC19-280ENST00000642102 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
CASC19-280ENST00000642102 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
CASC19-280ENST00000642102 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
CASC19-280ENST00000642102 ZBTB22O15209 634 aa14.24□□□□□ -0.13
CASC19-280ENST00000642102 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
CASC19-280ENST00000642102 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
CASC19-280ENST00000642102 MAMSTRQ6ZN01 415 aa14.1□□□□□ -0.15
CASC19-280ENST00000642102 LCE2DQ5TA82 110 aaPredicted RBP14.09□□□□□ -0.15
CASC19-280ENST00000642102 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
CASC19-280ENST00000642102 METRNQ9UJH8 293 aa14.07□□□□□ -0.16
CASC19-280ENST00000642102 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
CASC19-280ENST00000642102 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
CASC19-280ENST00000642102 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
CASC19-280ENST00000642102 C7P10643 843 aa14.01□□□□□ -0.17
CASC19-280ENST00000642102 SLC39A7Q92504 469 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms