RNA–Protein interactions for RNA: ENST00000641418.1

CASC19-229, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,373 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-229ENST00000641418 TOP2AP11388 1531 aaKnown RBP19.49■□□□□ 0.71
CASC19-229ENST00000641418 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
CASC19-229ENST00000641418 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
CASC19-229ENST00000641418 WDR62O43379 1518 aa19.46■□□□□ 0.71
CASC19-229ENST00000641418 RBM42Q9BTD8 480 aaKnown RBP19.45■□□□□ 0.7
CASC19-229ENST00000641418 CCDC88BA6NC98 1476 aa19.33■□□□□ 0.68
CASC19-229ENST00000641418 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
CASC19-229ENST00000641418 AKT1S1Q96B36 256 aa19.24■□□□□ 0.67
CASC19-229ENST00000641418 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
CASC19-229ENST00000641418 VASPP50552 380 aaPredicted RBP19.19■□□□□ 0.66
CASC19-229ENST00000641418 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
CASC19-229ENST00000641418 AMER1Q5JTC6 1135 aaPredicted RBP19.15■□□□□ 0.66
CASC19-229ENST00000641418 IFT140Q96RY7 1462 aa19.12■□□□□ 0.65
CASC19-229ENST00000641418 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
CASC19-229ENST00000641418 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
CASC19-229ENST00000641418 ZNF608Q9ULD9 1512 aaPredicted RBP19.06■□□□□ 0.64
CASC19-229ENST00000641418 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
CASC19-229ENST00000641418 SPDYE1Q8NFV5 336 aaPredicted RBP19.05■□□□□ 0.64
CASC19-229ENST00000641418 DNMBPQ6XZF7 1577 aa19■□□□□ 0.63
CASC19-229ENST00000641418 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
CASC19-229ENST00000641418 PLCD3Q8N3E9 789 aa18.93■□□□□ 0.62
CASC19-229ENST00000641418 RTN4Q9NQC3 1192 aaKnown RBP18.93■□□□□ 0.62
CASC19-229ENST00000641418 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.62
CASC19-229ENST00000641418 PLEKHG5O94827 1062 aa18.93■□□□□ 0.62
CASC19-229ENST00000641418 POLA1P09884 1462 aaPredicted RBP18.92■□□□□ 0.62
CASC19-229ENST00000641418 MIER1Q8N108 512 aa18.92■□□□□ 0.62
CASC19-229ENST00000641418 IFNLR1Q8IU57 520 aaPredicted RBP18.91■□□□□ 0.62
CASC19-229ENST00000641418 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
CASC19-229ENST00000641418 CLEC11AQ9Y240 323 aa18.89■□□□□ 0.61
CASC19-229ENST00000641418 SOGA1O94964 1423 aa18.88■□□□□ 0.61
CASC19-229ENST00000641418 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
CASC19-229ENST00000641418 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
CASC19-229ENST00000641418 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
CASC19-229ENST00000641418 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
CASC19-229ENST00000641418 KLHL34Q8N239 644 aa18.84■□□□□ 0.61
CASC19-229ENST00000641418 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
CASC19-229ENST00000641418 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
CASC19-229ENST00000641418 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
CASC19-229ENST00000641418 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
CASC19-229ENST00000641418 CUX1P39880 1505 aa18.78■□□□□ 0.6
CASC19-229ENST00000641418 RIMBP3CA6NJZ7 1639 aa18.76■□□□□ 0.59
CASC19-229ENST00000641418 RIMBP3BA6NNM3 1639 aa18.76■□□□□ 0.59
CASC19-229ENST00000641418 RIMBP3Q9UFD9 1639 aa18.76■□□□□ 0.59
CASC19-229ENST00000641418 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
CASC19-229ENST00000641418 PITPNM1O00562 1244 aa18.73■□□□□ 0.59
CASC19-229ENST00000641418 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
CASC19-229ENST00000641418 SPOCK2Q92563 424 aa18.72■□□□□ 0.59
CASC19-229ENST00000641418 SNAPC4Q5SXM2 1469 aa18.7■□□□□ 0.58
CASC19-229ENST00000641418 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
CASC19-229ENST00000641418 WDR97A6NE52 1622 aa18.68■□□□□ 0.58
CASC19-229ENST00000641418 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
CASC19-229ENST00000641418 CHD1O14646 1710 aa18.65■□□□□ 0.58
CASC19-229ENST00000641418 GAPVD1Q14C86 1478 aa18.62■□□□□ 0.57
CASC19-229ENST00000641418 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
CASC19-229ENST00000641418 SYNJ2O15056 1496 aa18.6■□□□□ 0.57
CASC19-229ENST00000641418 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
CASC19-229ENST00000641418 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.57
CASC19-229ENST00000641418 CREBZFQ9NS37 354 aa18.55■□□□□ 0.56
CASC19-229ENST00000641418 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
CASC19-229ENST00000641418 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
CASC19-229ENST00000641418 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
CASC19-229ENST00000641418 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
CASC19-229ENST00000641418 PBRM1Q86U86 1689 aa18.44■□□□□ 0.54
CASC19-229ENST00000641418 GRIN2AQ12879 1464 aa18.42■□□□□ 0.54
CASC19-229ENST00000641418 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
CASC19-229ENST00000641418 FHAD1B1AJZ9 1412 aa18.41■□□□□ 0.54
CASC19-229ENST00000641418 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
CASC19-229ENST00000641418 CHRDL2Q6WN34 429 aa18.41■□□□□ 0.54
CASC19-229ENST00000641418 PKD2Q13563 968 aa18.39■□□□□ 0.53
CASC19-229ENST00000641418 MNX1P50219 401 aaPredicted RBP18.38■□□□□ 0.53
CASC19-229ENST00000641418 NUP160Q12769 1436 aa18.38■□□□□ 0.53
CASC19-229ENST00000641418 ADAMTS12P58397 1594 aa18.35■□□□□ 0.53
CASC19-229ENST00000641418 FXR2P51116 673 aaKnown RBP eCLIP18.35■□□□□ 0.53
CASC19-229ENST00000641418 CIZ1Q9ULV3 898 aaPredicted RBP18.35■□□□□ 0.53
CASC19-229ENST00000641418 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
CASC19-229ENST00000641418 GSE1Q14687 1217 aa18.33■□□□□ 0.53
CASC19-229ENST00000641418 NUBP1P53384 320 aa18.32■□□□□ 0.52
CASC19-229ENST00000641418 PRKAR2AP13861 404 aaKnown RBP18.3■□□□□ 0.52
CASC19-229ENST00000641418 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
CASC19-229ENST00000641418 CEP170Q5SW79 1584 aa18.3■□□□□ 0.52
CASC19-229ENST00000641418 ECM2O94769 699 aaPredicted RBP18.3■□□□□ 0.52
CASC19-229ENST00000641418 JPH4Q96JJ6 628 aa18.27■□□□□ 0.51
CASC19-229ENST00000641418 FAM212AQ96EL1 285 aa18.26■□□□□ 0.51
CASC19-229ENST00000641418 ERCC6L2Q5T890 1561 aa18.26■□□□□ 0.51
CASC19-229ENST00000641418 DCAF8Q5TAQ9 597 aa18.25■□□□□ 0.51
CASC19-229ENST00000641418 FARP1Q9Y4F1 1045 aaPredicted RBP18.25■□□□□ 0.51
CASC19-229ENST00000641418 PIP4P2Q8N4L2 257 aa18.22■□□□□ 0.51
CASC19-229ENST00000641418 IGF1RP08069 1367 aa18.22■□□□□ 0.51
CASC19-229ENST00000641418 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
CASC19-229ENST00000641418 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
CASC19-229ENST00000641418 SHROOM2Q13796 1616 aa18.19■□□□□ 0.5
CASC19-229ENST00000641418 RASEFQ8IZ41 740 aa18.14■□□□□ 0.49
CASC19-229ENST00000641418 KIAA0586Q9BVV6 1533 aa18.1■□□□□ 0.49
CASC19-229ENST00000641418 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
CASC19-229ENST00000641418 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
CASC19-229ENST00000641418 RGL2O15211 777 aa18.03■□□□□ 0.48
CASC19-229ENST00000641418 CUL7Q14999 1698 aa18.02■□□□□ 0.48
CASC19-229ENST00000641418 PAK3O75914 559 aaPredicted RBP18.02■□□□□ 0.47
CASC19-229ENST00000641418 CHRM1P11229 460 aaPredicted RBP18.02■□□□□ 0.47
CASC19-229ENST00000641418 TSPYL2Q9H2G4 693 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms