RNA–Protein interactions for RNA: ENST00000641001.1

CASC19-204, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,055 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-204ENST00000641001 RNF25Q96BH1 459 aaPredicted RBP8.92□□□□□ -0.98
CASC19-204ENST00000641001 TRIM41Q8WV44 630 aa8.89□□□□□ -0.99
CASC19-204ENST00000641001 GTF3C3Q9Y5Q9 886 aa8.89□□□□□ -0.99
CASC19-204ENST00000641001 NKX1-1Q15270 411 aaPredicted RBP8.89□□□□□ -0.99
CASC19-204ENST00000641001 DSG3P32926 999 aa8.88□□□□□ -0.99
CASC19-204ENST00000641001 GTPBP6O43824 516 aaPredicted RBP8.84□□□□□ -0.99
CASC19-204ENST00000641001 GSE1Q14687 1217 aa8.82□□□□□ -1
CASC19-204ENST00000641001 STK25O00506 426 aa8.8□□□□□ -1
CASC19-204ENST00000641001 RIOK3O14730 519 aaKnown RBP8.8□□□□□ -1
CASC19-204ENST00000641001 DCAF8Q5TAQ9 597 aa8.8□□□□□ -1
CASC19-204ENST00000641001 NUBP1P53384 320 aa8.77□□□□□ -1
CASC19-204ENST00000641001 TMEM132AQ24JP5 1023 aa8.73□□□□□ -1.01
CASC19-204ENST00000641001 VGFO15240 615 aaPredicted RBP8.72□□□□□ -1.01
CASC19-204ENST00000641001 STK24Q9Y6E0 443 aa8.71□□□□□ -1.01
CASC19-204ENST00000641001 BCL11BQ9C0K0 894 aaPredicted RBP8.7□□□□□ -1.02
CASC19-204ENST00000641001 ARXQ96QS3 562 aa8.69□□□□□ -1.02
CASC19-204ENST00000641001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.68□□□□□ -1.02
CASC19-204ENST00000641001 FAM212AQ96EL1 285 aa8.68□□□□□ -1.02
CASC19-204ENST00000641001 ZFP91Q96JP5 570 aaPredicted RBP8.68□□□□□ -1.02
CASC19-204ENST00000641001 PELP1Q8IZL8 1130 aaKnown RBP8.67□□□□□ -1.02
CASC19-204ENST00000641001 ERICH6Q7L0X2 663 aa8.66□□□□□ -1.02
CASC19-204ENST00000641001 C14orf37Q86TY3 774 aa8.66□□□□□ -1.02
CASC19-204ENST00000641001 P3H3Q8IVL6 736 aa8.64□□□□□ -1.03
CASC19-204ENST00000641001 PYGBP11216 843 aa8.62□□□□□ -1.03
CASC19-204ENST00000641001 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
CASC19-204ENST00000641001 RYDENQ9NUL5 291 aaKnown RBP8.62□□□□□ -1.03
CASC19-204ENST00000641001 RASEFQ8IZ41 740 aa8.61□□□□□ -1.03
CASC19-204ENST00000641001 KCNV2Q8TDN2 545 aa8.61□□□□□ -1.03
CASC19-204ENST00000641001 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.6□□□□□ -1.03
CASC19-204ENST00000641001 CREBZFQ9NS37 354 aa8.6□□□□□ -1.03
CASC19-204ENST00000641001 WDR70Q9NW82 654 aa8.6□□□□□ -1.03
CASC19-204ENST00000641001 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
CASC19-204ENST00000641001 CLEC11AQ9Y240 323 aa8.6□□□□□ -1.03
CASC19-204ENST00000641001 CHRM1P11229 460 aaPredicted RBP8.59□□□□□ -1.03
CASC19-204ENST00000641001 CADPS2Q86UW7 1296 aa8.59□□□□□ -1.03
CASC19-204ENST00000641001 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.03
CASC19-204ENST00000641001 MNX1P50219 401 aaPredicted RBP8.58□□□□□ -1.04
CASC19-204ENST00000641001 MYT1Q01538 1121 aa8.57□□□□□ -1.04
CASC19-204ENST00000641001 TTBK1Q5TCY1 1321 aaPredicted RBP8.57□□□□□ -1.04
CASC19-204ENST00000641001 PRR29P0C7W0 189 aa8.56□□□□□ -1.04
CASC19-204ENST00000641001 SPDYE1Q8NFV5 336 aaPredicted RBP8.56□□□□□ -1.04
CASC19-204ENST00000641001 HOMEZQ8IX15 550 aa8.55□□□□□ -1.04
CASC19-204ENST00000641001 BRPF1P55201 1214 aaPredicted RBP8.54□□□□□ -1.04
CASC19-204ENST00000641001 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
CASC19-204ENST00000641001 SUPT5HO00267 1087 aaKnown RBP8.47□□□□□ -1.05
CASC19-204ENST00000641001 ZC3H15Q8WU90 426 aaKnown RBP8.47□□□□□ -1.05
CASC19-204ENST00000641001 SLC24A3Q9HC58 644 aa8.46□□□□□ -1.05
CASC19-204ENST00000641001 AKT1S1Q96B36 256 aa8.44□□□□□ -1.06
CASC19-204ENST00000641001 SEMA3EO15041 775 aa8.43□□□□□ -1.06
CASC19-204ENST00000641001 TSPYL2Q9H2G4 693 aaPredicted RBP8.42□□□□□ -1.06
CASC19-204ENST00000641001 MFRPQ9BY79 579 aa8.42□□□□□ -1.06
CASC19-204ENST00000641001 ZNF467Q7Z7K2 595 aaPredicted RBP8.41□□□□□ -1.06
CASC19-204ENST00000641001 PCDHB8Q9UN66 801 aa8.41□□□□□ -1.06
CASC19-204ENST00000641001 PCDHB13Q9Y5F0 798 aa8.41□□□□□ -1.06
CASC19-204ENST00000641001 ARHGEF1Q92888 912 aaKnown RBP8.41□□□□□ -1.06
CASC19-204ENST00000641001 PDAP1Q13442 181 aaKnown RBP8.4□□□□□ -1.06
CASC19-204ENST00000641001 REM2Q8IYK8 340 aaPredicted RBP8.4□□□□□ -1.06
CASC19-204ENST00000641001 PPP1R37O75864 691 aa8.39□□□□□ -1.07
CASC19-204ENST00000641001 E2F4Q16254 413 aa8.39□□□□□ -1.07
CASC19-204ENST00000641001 TESPA1A2RU30 521 aaPredicted RBP8.37□□□□□ -1.07
CASC19-204ENST00000641001 RBM42Q9BTD8 480 aaKnown RBP8.37□□□□□ -1.07
CASC19-204ENST00000641001 CACNB1Q02641 598 aaPredicted RBP8.36□□□□□ -1.07
CASC19-204ENST00000641001 PSEN1P49768 467 aa8.35□□□□□ -1.07
CASC19-204ENST00000641001 CHADLQ6NUI6 762 aa8.33□□□□□ -1.08
CASC19-204ENST00000641001 CCDC180Q9P1Z9 1646 aa8.33□□□□□ -1.08
CASC19-204ENST00000641001 RB1CC1Q8TDY2 1594 aa8.33□□□□□ -1.08
CASC19-204ENST00000641001 ZMYND10O75800 440 aa8.32□□□□□ -1.08
CASC19-204ENST00000641001 PITPNM1O00562 1244 aa8.31□□□□□ -1.08
CASC19-204ENST00000641001 EFCAB3Q8N7B9 438 aa8.31□□□□□ -1.08
CASC19-204ENST00000641001 PHF8Q9UPP1 1060 aa8.3□□□□□ -1.08
CASC19-204ENST00000641001 FBXO22Q8NEZ5 403 aa8.29□□□□□ -1.08
CASC19-204ENST00000641001 CABP2Q9NPB3 220 aa8.29□□□□□ -1.08
CASC19-204ENST00000641001 CECR2Q9BXF3 1484 aa8.28□□□□□ -1.08
CASC19-204ENST00000641001 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
CASC19-204ENST00000641001 LARP6Q9BRS8 491 aaKnown RBP8.28□□□□□ -1.08
CASC19-204ENST00000641001 GPBP1L1Q9HC44 474 aaPredicted RBP8.28□□□□□ -1.08
CASC19-204ENST00000641001 NLRP6P59044 892 aa8.27□□□□□ -1.09
CASC19-204ENST00000641001 ZNF579Q8NAF0 562 aaKnown RBP8.27□□□□□ -1.09
CASC19-204ENST00000641001 SMYD5Q6GMV2 418 aa8.26□□□□□ -1.09
CASC19-204ENST00000641001 CCDC61Q9Y6R9 512 aa8.26□□□□□ -1.09
CASC19-204ENST00000641001 BARGINQ6ZT62 677 aa8.24□□□□□ -1.09
CASC19-204ENST00000641001 IL27Q8NEV9 243 aa8.24□□□□□ -1.09
CASC19-204ENST00000641001 UBTFP17480 764 aaKnown RBP8.23□□□□□ -1.09
CASC19-204ENST00000641001 IFNL1Q8IU54 200 aa8.23□□□□□ -1.09
CASC19-204ENST00000641001 FARP1Q9Y4F1 1045 aaPredicted RBP8.23□□□□□ -1.09
CASC19-204ENST00000641001 SOX12O15370 315 aa8.22□□□□□ -1.09
CASC19-204ENST00000641001 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
CASC19-204ENST00000641001 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
CASC19-204ENST00000641001 PDE4AP27815 886 aa8.22□□□□□ -1.09
CASC19-204ENST00000641001 KRI1Q8N9T8 703 aaKnown RBP8.22□□□□□ -1.09
CASC19-204ENST00000641001 DDX27Q96GQ7 796 aaKnown RBP8.2□□□□□ -1.1
CASC19-204ENST00000641001 AK7Q96M32 723 aa8.2□□□□□ -1.1
CASC19-204ENST00000641001 MLLT3P42568 568 aaPredicted RBP8.19□□□□□ -1.1
CASC19-204ENST00000641001 GPIHBP1Q8IV16 184 aa8.19□□□□□ -1.1
CASC19-204ENST00000641001 CUX2O14529 1486 aa8.19□□□□□ -1.1
CASC19-204ENST00000641001 MAP3K13O43283 966 aa8.18□□□□□ -1.1
CASC19-204ENST00000641001 MFSD10Q14728 455 aa8.18□□□□□ -1.1
CASC19-204ENST00000641001 KDM4CQ9H3R0 1056 aa8.18□□□□□ -1.1
CASC19-204ENST00000641001 ZMYND15Q9H091 742 aa8.17□□□□□ -1.1
CASC19-204ENST00000641001 CRISPLD2Q9H0B8 497 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms