RNA–Protein interactions for RNA: ENST00000639344.1

KCNMA1-257, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-257ENST00000639344 NPM2Q86SE8 214 aaKnown RBP11.56□□□□□ -0.56
KCNMA1-257ENST00000639344 IL27Q8NEV9 243 aa11.56□□□□□ -0.56
KCNMA1-257ENST00000639344 HOMEZQ8IX15 550 aa11.56□□□□□ -0.56
KCNMA1-257ENST00000639344 FAM9BQ8IZU0 186 aa11.56□□□□□ -0.56
KCNMA1-257ENST00000639344 HSP90AA2PQ14568 343 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-257ENST00000639344 CLIP1P30622 1438 aa11.55□□□□□ -0.56
KCNMA1-257ENST00000639344 NEFMP07197 916 aa11.55□□□□□ -0.56
KCNMA1-257ENST00000639344 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-257ENST00000639344 NACADO15069 1562 aa11.55□□□□□ -0.56
KCNMA1-257ENST00000639344 RBM10P98175 930 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-257ENST00000639344 FGD1P98174 961 aa11.53□□□□□ -0.56
KCNMA1-257ENST00000639344 C14orf37Q86TY3 774 aa11.53□□□□□ -0.56
KCNMA1-257ENST00000639344 NCLP19338 710 aaKnown RBP11.52□□□□□ -0.57
KCNMA1-257ENST00000639344 AEBP2Q6ZN18 517 aaPredicted RBP11.51□□□□□ -0.57
KCNMA1-257ENST00000639344 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
KCNMA1-257ENST00000639344 ARID3CA6NKF2 412 aa11.51□□□□□ -0.57
KCNMA1-257ENST00000639344 PLPPR3Q6T4P5 718 aa11.5□□□□□ -0.57
KCNMA1-257ENST00000639344 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
KCNMA1-257ENST00000639344 CDK11BP21127 795 aaKnown RBP11.5□□□□□ -0.57
KCNMA1-257ENST00000639344 HSP90AA1P07900 732 aaKnown RBP11.49□□□□□ -0.57
KCNMA1-257ENST00000639344 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
KCNMA1-257ENST00000639344 TNIKQ9UKE5 1360 aa11.48□□□□□ -0.57
KCNMA1-257ENST00000639344 SENP3-EIF4A1A0A087X0R7 540 aa11.47□□□□□ -0.57
KCNMA1-257ENST00000639344 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
KCNMA1-257ENST00000639344 RB1CC1Q8TDY2 1594 aa11.47□□□□□ -0.57
KCNMA1-257ENST00000639344 TNNT2P45379 298 aaPredicted RBP11.46□□□□□ -0.57
KCNMA1-257ENST00000639344 NOP58Q9Y2X3 529 aaKnown RBP11.46□□□□□ -0.58
KCNMA1-257ENST00000639344 SOGA1O94964 1423 aa11.45□□□□□ -0.58
KCNMA1-257ENST00000639344 SIN3AQ96ST3 1273 aa11.45□□□□□ -0.58
KCNMA1-257ENST00000639344 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
KCNMA1-257ENST00000639344 DHX37Q8IY37 1157 aaKnown RBP11.44□□□□□ -0.58
KCNMA1-257ENST00000639344 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
KCNMA1-257ENST00000639344 MRS2Q9HD23 443 aa11.42□□□□□ -0.58
KCNMA1-257ENST00000639344 CANXP27824 592 aaKnown RBP11.42□□□□□ -0.58
KCNMA1-257ENST00000639344 CHIC2Q9UKJ5 165 aa11.41□□□□□ -0.58
KCNMA1-257ENST00000639344 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
KCNMA1-257ENST00000639344 BRD2P25440 801 aaKnown RBP11.38□□□□□ -0.59
KCNMA1-257ENST00000639344 AAMPQ13685 434 aa11.38□□□□□ -0.59
KCNMA1-257ENST00000639344 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
KCNMA1-257ENST00000639344 EEA1Q15075 1411 aa11.37□□□□□ -0.59
KCNMA1-257ENST00000639344 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
KCNMA1-257ENST00000639344 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
KCNMA1-257ENST00000639344 CCDC88BA6NC98 1476 aa11.34□□□□□ -0.59
KCNMA1-257ENST00000639344 ARID4BQ4LE39 1312 aaPredicted RBP11.34□□□□□ -0.59
KCNMA1-257ENST00000639344 B4GALNT3Q6L9W6 998 aa11.33□□□□□ -0.6
KCNMA1-257ENST00000639344 MROH2BQ7Z745 1585 aa11.33□□□□□ -0.6
KCNMA1-257ENST00000639344 ABCC8Q09428 1581 aa11.32□□□□□ -0.6
KCNMA1-257ENST00000639344 FANCIQ9NVI1 1328 aa11.32□□□□□ -0.6
KCNMA1-257ENST00000639344 CHMP4AQ9BY43 222 aa11.32□□□□□ -0.6
KCNMA1-257ENST00000639344 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
KCNMA1-257ENST00000639344 TMC1Q8TDI8 760 aa11.31□□□□□ -0.6
KCNMA1-257ENST00000639344 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
KCNMA1-257ENST00000639344 CEP164Q9UPV0 1460 aa11.3□□□□□ -0.6
KCNMA1-257ENST00000639344 ZNF777Q9ULD5 760 aaPredicted RBP11.3□□□□□ -0.6
KCNMA1-257ENST00000639344 RRP7BPQ9NSQ0 103 aa11.3□□□□□ -0.6
KCNMA1-257ENST00000639344 USP35Q9P2H5 1018 aa11.3□□□□□ -0.6
KCNMA1-257ENST00000639344 BAZ1AQ9NRL2 1556 aaPredicted RBP11.29□□□□□ -0.6
KCNMA1-257ENST00000639344 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
KCNMA1-257ENST00000639344 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
KCNMA1-257ENST00000639344 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
KCNMA1-257ENST00000639344 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
KCNMA1-257ENST00000639344 APPP05067 770 aa11.25□□□□□ -0.61
KCNMA1-257ENST00000639344 PPP4R2Q9NY27 417 aa11.25□□□□□ -0.61
KCNMA1-257ENST00000639344 RRP9O43818 475 aaKnown RBP11.25□□□□□ -0.61
KCNMA1-257ENST00000639344 VPS8Q8N3P4 1428 aa11.25□□□□□ -0.61
KCNMA1-257ENST00000639344 MSH5O43196 834 aa11.24□□□□□ -0.61
KCNMA1-257ENST00000639344 PPM1GO15355 546 aaPredicted RBP11.24□□□□□ -0.61
KCNMA1-257ENST00000639344 LAS1LQ9Y4W2 734 aaKnown RBP11.24□□□□□ -0.61
KCNMA1-257ENST00000639344 MTUS2Q5JR59 1369 aa11.24□□□□□ -0.61
KCNMA1-257ENST00000639344 WIZO95785 1651 aa11.24□□□□□ -0.61
KCNMA1-257ENST00000639344 TRIM44Q96DX7 344 aaPredicted RBP11.22□□□□□ -0.61
KCNMA1-257ENST00000639344 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
KCNMA1-257ENST00000639344 PTMSP20962 102 aa11.21□□□□□ -0.61
KCNMA1-257ENST00000639344 FBLN2P98095 1184 aa11.2□□□□□ -0.62
KCNMA1-257ENST00000639344 BRPF3Q9ULD4 1205 aa11.2□□□□□ -0.62
KCNMA1-257ENST00000639344 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
KCNMA1-257ENST00000639344 CCER2I3L3R5 266 aa11.18□□□□□ -0.62
KCNMA1-257ENST00000639344 DHX57Q6P158 1386 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-257ENST00000639344 RAB3GAP2Q9H2M9 1393 aa11.17□□□□□ -0.62
KCNMA1-257ENST00000639344 DNTTIP2Q5QJE6 756 aaKnown RBP11.17□□□□□ -0.62
KCNMA1-257ENST00000639344 PATL2C9JE40 543 aaKnown RBP11.17□□□□□ -0.62
KCNMA1-257ENST00000639344 ANP32BQ92688 251 aaKnown RBP11.16□□□□□ -0.62
KCNMA1-257ENST00000639344 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
KCNMA1-257ENST00000639344 TOP2AP11388 1531 aaKnown RBP11.12□□□□□ -0.63
KCNMA1-257ENST00000639344 HSP90B1P14625 803 aaKnown RBP11.12□□□□□ -0.63
KCNMA1-257ENST00000639344 SETD5Q9C0A6 1442 aa11.11□□□□□ -0.63
KCNMA1-257ENST00000639344 PPP1R15AO75807 674 aaPredicted RBP11.11□□□□□ -0.63
KCNMA1-257ENST00000639344 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
KCNMA1-257ENST00000639344 HSPA5P11021 654 aaKnown RBP11.11□□□□□ -0.63
KCNMA1-257ENST00000639344 ARID3AQ99856 593 aa11.1□□□□□ -0.63
KCNMA1-257ENST00000639344 RGS3P49796 1198 aa11.1□□□□□ -0.63
KCNMA1-257ENST00000639344 FAM43AQ8N2R8 423 aa11.09□□□□□ -0.63
KCNMA1-257ENST00000639344 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
KCNMA1-257ENST00000639344 GSE1Q14687 1217 aa11.09□□□□□ -0.63
KCNMA1-257ENST00000639344 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
KCNMA1-257ENST00000639344 FOXD1Q16676 465 aa11.09□□□□□ -0.63
KCNMA1-257ENST00000639344 RAPGEF2Q9Y4G8 1499 aa11.08□□□□□ -0.64
KCNMA1-257ENST00000639344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.64
KCNMA1-257ENST00000639344 UPF2Q9HAU5 1272 aaKnown RBP11.06□□□□□ -0.64
KCNMA1-257ENST00000639344 IPO9Q96P70 1041 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 251.2 ms