RNA–Protein interactions for RNA: ENST00000638965.1

PAX6-247, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-247ENST00000638965 FANCD2Q9BXW9 1451 aa23.12■■□□□ 1.29
PAX6-247ENST00000638965 CFTRP13569 1480 aa23.11■■□□□ 1.29
PAX6-247ENST00000638965 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
PAX6-247ENST00000638965 PITPNM1O00562 1244 aa23.05■■□□□ 1.28
PAX6-247ENST00000638965 SPDYE4A6NLX3 237 aa23.02■■□□□ 1.28
PAX6-247ENST00000638965 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
PAX6-247ENST00000638965 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
PAX6-247ENST00000638965 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
PAX6-247ENST00000638965 POTEHQ6S545 545 aa22.99■■□□□ 1.27
PAX6-247ENST00000638965 SPDYE1Q8NFV5 336 aaPredicted RBP22.93■■□□□ 1.26
PAX6-247ENST00000638965 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
PAX6-247ENST00000638965 CLEC11AQ9Y240 323 aa22.83■■□□□ 1.25
PAX6-247ENST00000638965 RIMBP3CA6NJZ7 1639 aa22.75■■□□□ 1.23
PAX6-247ENST00000638965 RIMBP3BA6NNM3 1639 aa22.75■■□□□ 1.23
PAX6-247ENST00000638965 RIMBP3Q9UFD9 1639 aa22.75■■□□□ 1.23
PAX6-247ENST00000638965 PIP4P2Q8N4L2 257 aa22.75■■□□□ 1.23
PAX6-247ENST00000638965 ZNF608Q9ULD9 1512 aaPredicted RBP22.74■■□□□ 1.23
PAX6-247ENST00000638965 FXR2P51116 673 aaKnown RBP eCLIP22.74■■□□□ 1.23
PAX6-247ENST00000638965 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
PAX6-247ENST00000638965 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
PAX6-247ENST00000638965 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
PAX6-247ENST00000638965 EIF4G3O43432 1585 aaKnown RBP22.64■■□□□ 1.22
PAX6-247ENST00000638965 ARHGEF11O15085 1522 aa22.64■■□□□ 1.21
PAX6-247ENST00000638965 PROM2Q8N271 834 aa22.61■■□□□ 1.21
PAX6-247ENST00000638965 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
PAX6-247ENST00000638965 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
PAX6-247ENST00000638965 PRR29P0C7W0 189 aa22.57■■□□□ 1.2
PAX6-247ENST00000638965 FKBP8Q14318 412 aa22.56■■□□□ 1.2
PAX6-247ENST00000638965 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
PAX6-247ENST00000638965 STAG3Q9UJ98 1225 aa22.53■■□□□ 1.2
PAX6-247ENST00000638965 CHD1O14646 1710 aa22.53■■□□□ 1.2
PAX6-247ENST00000638965 PRKAR2AP13861 404 aaKnown RBP22.46■■□□□ 1.19
PAX6-247ENST00000638965 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.18
PAX6-247ENST00000638965 POLA1P09884 1462 aaPredicted RBP22.44■■□□□ 1.18
PAX6-247ENST00000638965 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
PAX6-247ENST00000638965 CHADLQ6NUI6 762 aa22.34■■□□□ 1.17
PAX6-247ENST00000638965 CYB5RLQ6IPT4 315 aa22.32■■□□□ 1.16
PAX6-247ENST00000638965 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
PAX6-247ENST00000638965 WDR97A6NE52 1622 aa22.31■■□□□ 1.16
PAX6-247ENST00000638965 CLASP1Q7Z460 1538 aa22.29■■□□□ 1.16
PAX6-247ENST00000638965 SOGA1O94964 1423 aa22.24■■□□□ 1.15
PAX6-247ENST00000638965 SNAPC4Q5SXM2 1469 aa22.24■■□□□ 1.15
PAX6-247ENST00000638965 FGD5Q6ZNL6 1462 aa22.23■■□□□ 1.15
PAX6-247ENST00000638965 TDRD9Q8NDG6 1382 aaKnown RBP22.23■■□□□ 1.15
PAX6-247ENST00000638965 CUX1P39880 1505 aa22.21■■□□□ 1.15
PAX6-247ENST00000638965 CREBZFQ9NS37 354 aa22.2■■□□□ 1.14
PAX6-247ENST00000638965 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
PAX6-247ENST00000638965 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
PAX6-247ENST00000638965 GRIN2BQ13224 1484 aa22.13■■□□□ 1.13
PAX6-247ENST00000638965 HAX1O00165 279 aa22.12■■□□□ 1.13
PAX6-247ENST00000638965 SYNJ2O15056 1496 aa22.11■■□□□ 1.13
PAX6-247ENST00000638965 FARP1Q9Y4F1 1045 aaPredicted RBP22.1■■□□□ 1.13
PAX6-247ENST00000638965 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
PAX6-247ENST00000638965 ABCA5Q8WWZ7 1642 aa22.05■■□□□ 1.12
PAX6-247ENST00000638965 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
PAX6-247ENST00000638965 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
PAX6-247ENST00000638965 ABCA10Q8WWZ4 1543 aa22■■□□□ 1.11
PAX6-247ENST00000638965 C19orf67A6NJJ6 358 aa21.98■■□□□ 1.11
PAX6-247ENST00000638965 EVX2Q03828 476 aa21.94■■□□□ 1.1
PAX6-247ENST00000638965 MNX1P50219 401 aaPredicted RBP21.91■■□□□ 1.1
PAX6-247ENST00000638965 ERCC6L2Q5T890 1561 aa21.9■■□□□ 1.1
PAX6-247ENST00000638965 FBXO3Q9UK99 471 aa21.89■■□□□ 1.09
PAX6-247ENST00000638965 ADAMTS12P58397 1594 aa21.88■■□□□ 1.09
PAX6-247ENST00000638965 MIER1Q8N108 512 aa21.87■■□□□ 1.09
PAX6-247ENST00000638965 SP7Q8TDD2 431 aaPredicted RBP21.87■■□□□ 1.09
PAX6-247ENST00000638965 GRIN2AQ12879 1464 aa21.87■■□□□ 1.09
PAX6-247ENST00000638965 CEP170Q5SW79 1584 aa21.86■■□□□ 1.09
PAX6-247ENST00000638965 NUP160Q12769 1436 aa21.84■■□□□ 1.09
PAX6-247ENST00000638965 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
PAX6-247ENST00000638965 BIVM-ERCC5R4GMW8 1640 aa21.81■■□□□ 1.08
PAX6-247ENST00000638965 NPM1P06748 294 aaKnown RBP eCLIP21.79■■□□□ 1.08
PAX6-247ENST00000638965 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
PAX6-247ENST00000638965 PLEKHG5O94827 1062 aa21.78■■□□□ 1.08
PAX6-247ENST00000638965 CD44P16070 742 aaKnown RBP21.78■■□□□ 1.08
PAX6-247ENST00000638965 PLCD3Q8N3E9 789 aa21.78■■□□□ 1.08
PAX6-247ENST00000638965 WRNQ14191 1432 aaPredicted RBP eCLIP21.77■■□□□ 1.08
PAX6-247ENST00000638965 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
PAX6-247ENST00000638965 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.07
PAX6-247ENST00000638965 KIF13AQ9H1H9 1805 aa21.69■■□□□ 1.06
PAX6-247ENST00000638965 VASPP50552 380 aaPredicted RBP21.62■■□□□ 1.05
PAX6-247ENST00000638965 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
PAX6-247ENST00000638965 ZRANB1Q9UGI0 708 aa21.58■■□□□ 1.05
PAX6-247ENST00000638965 ZBTB47Q9UFB7 747 aaPredicted RBP21.57■■□□□ 1.04
PAX6-247ENST00000638965 PRG4Q92954 1404 aaPredicted RBP21.56■■□□□ 1.04
PAX6-247ENST00000638965 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
PAX6-247ENST00000638965 PAK3O75914 559 aaPredicted RBP21.53■■□□□ 1.04
PAX6-247ENST00000638965 ZNF579Q8NAF0 562 aaKnown RBP21.49■■□□□ 1.03
PAX6-247ENST00000638965 GABBR2O75899 941 aa21.48■■□□□ 1.03
PAX6-247ENST00000638965 MAPKBP1O60336 1514 aa21.48■■□□□ 1.03
PAX6-247ENST00000638965 ADCY10Q96PN6 1610 aa21.47■■□□□ 1.03
PAX6-247ENST00000638965 ABCC10Q5T3U5 1492 aa21.46■■□□□ 1.03
PAX6-247ENST00000638965 JPH4Q96JJ6 628 aa21.46■■□□□ 1.03
PAX6-247ENST00000638965 DIP2BQ9P265 1576 aa21.45■■□□□ 1.02
PAX6-247ENST00000638965 RASEFQ8IZ41 740 aa21.42■■□□□ 1.02
PAX6-247ENST00000638965 NUBP1P53384 320 aa21.41■■□□□ 1.02
PAX6-247ENST00000638965 TSPYL2Q9H2G4 693 aaPredicted RBP21.4■■□□□ 1.02
PAX6-247ENST00000638965 CLCN6P51797 869 aa21.38■■□□□ 1.01
PAX6-247ENST00000638965 KIAA0586Q9BVV6 1533 aa21.36■■□□□ 1.01
PAX6-247ENST00000638965 CUL7Q14999 1698 aa21.34■■□□□ 1.01
PAX6-247ENST00000638965 KLHL34Q8N239 644 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms