RNA–Protein interactions for RNA: ENST00000638965.1

PAX6-247, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-247ENST00000638965 AEBP2Q6ZN18 517 aaPredicted RBP42.35■■■■■ 4.37
PAX6-247ENST00000638965 CHIC1Q5VXU3 224 aa40.86■■■■■ 4.13
PAX6-247ENST00000638965 SENP3Q9H4L4 574 aaPredicted RBP35.99■■■■□ 3.35
PAX6-247ENST00000638965 PHF23Q9BUL5 403 aaPredicted RBP35.9■■■■□ 3.34
PAX6-247ENST00000638965 FOXD1Q16676 465 aa33.47■■■□□ 2.95
PAX6-247ENST00000638965 PLPPR3Q6T4P5 718 aa32.94■■■□□ 2.86
PAX6-247ENST00000638965 PPP6R1Q9UPN7 881 aa31.83■■■□□ 2.69
PAX6-247ENST00000638965 ADRA2BP18089 450 aa31.75■■■□□ 2.67
PAX6-247ENST00000638965 PIAS4Q8N2W9 510 aaPredicted RBP31.42■■■□□ 2.62
PAX6-247ENST00000638965 MSH5O43196 834 aa31.05■■■□□ 2.56
PAX6-247ENST00000638965 NISCHQ9Y2I1 1504 aa30.65■■■□□ 2.5
PAX6-247ENST00000638965 POTEDQ86YR6 584 aa29.17■■■□□ 2.26
PAX6-247ENST00000638965 SCAF1Q9H7N4 1312 aaKnown RBP29.04■■■□□ 2.24
PAX6-247ENST00000638965 MAPK8IP2Q13387 824 aaPredicted RBP28.97■■■□□ 2.23
PAX6-247ENST00000638965 PPP4R3CPQ6ZMV5 832 aa28.97■■■□□ 2.23
PAX6-247ENST00000638965 DMRT2Q9Y5R5 561 aa28.66■■■□□ 2.18
PAX6-247ENST00000638965 CNKSR2Q8WXI2 1034 aa28.27■■■□□ 2.12
PAX6-247ENST00000638965 NCBP3Q53F19 620 aaKnown RBP28.05■■■□□ 2.08
PAX6-247ENST00000638965 HOXD11P31277 338 aaPredicted RBP27.88■■■□□ 2.05
PAX6-247ENST00000638965 RNF216Q9NWF9 866 aaPredicted RBP27.85■■■□□ 2.05
PAX6-247ENST00000638965 ABCC9O60706 1549 aa27.83■■■□□ 2.05
PAX6-247ENST00000638965 KCNA4P22459 653 aa27.73■■■□□ 2.03
PAX6-247ENST00000638965 CCDC180Q9P1Z9 1646 aa27.7■■■□□ 2.02
PAX6-247ENST00000638965 NPM3O75607 178 aaKnown RBP27.66■■■□□ 2.02
PAX6-247ENST00000638965 DCAF8L1A6NGE4 600 aa27.39■■□□□ 1.98
PAX6-247ENST00000638965 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
PAX6-247ENST00000638965 RNF39Q9H2S5 420 aa26.58■■□□□ 1.85
PAX6-247ENST00000638965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.53■■□□□ 1.84
PAX6-247ENST00000638965 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
PAX6-247ENST00000638965 SLC4A1APQ9BWU0 796 aaKnown RBP26.3■■□□□ 1.8
PAX6-247ENST00000638965 SLC4A2P04920 1241 aa26.25■■□□□ 1.79
PAX6-247ENST00000638965 CACNB1Q02641 598 aaPredicted RBP26.22■■□□□ 1.79
PAX6-247ENST00000638965 C1QBPQ07021 282 aaKnown RBP26.22■■□□□ 1.79
PAX6-247ENST00000638965 NACADO15069 1562 aa26.19■■□□□ 1.78
PAX6-247ENST00000638965 U3KPZ7 1027 aaPredicted RBP26.07■■□□□ 1.76
PAX6-247ENST00000638965 UNC13AQ9UPW8 1703 aa25.94■■□□□ 1.74
PAX6-247ENST00000638965 MYO15BQ96JP2 1530 aa25.79■■□□□ 1.72
PAX6-247ENST00000638965 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.72
PAX6-247ENST00000638965 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
PAX6-247ENST00000638965 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
PAX6-247ENST00000638965 FOXD4L1Q9NU39 408 aa25.66■■□□□ 1.7
PAX6-247ENST00000638965 MYCNP04198 464 aaPredicted RBP25.56■■□□□ 1.68
PAX6-247ENST00000638965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.55■■□□□ 1.68
PAX6-247ENST00000638965 HNRNPUL2Q1KMD3 747 aaKnown RBP25.55■■□□□ 1.68
PAX6-247ENST00000638965 ZBTB22O15209 634 aa25.52■■□□□ 1.68
PAX6-247ENST00000638965 SPINK5Q9NQ38 1064 aaPredicted RBP25.48■■□□□ 1.67
PAX6-247ENST00000638965 SAMD1Q6SPF0 538 aaPredicted RBP25.44■■□□□ 1.66
PAX6-247ENST00000638965 APLP2Q06481 763 aa25.39■■□□□ 1.66
PAX6-247ENST00000638965 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
PAX6-247ENST00000638965 CAPN15O75808 1086 aa25.38■■□□□ 1.65
PAX6-247ENST00000638965 DCAF1Q9Y4B6 1507 aa25.36■■□□□ 1.65
PAX6-247ENST00000638965 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
PAX6-247ENST00000638965 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
PAX6-247ENST00000638965 TRHP20396 242 aaPredicted RBP25.15■■□□□ 1.62
PAX6-247ENST00000638965 SCRIBQ14160 1630 aa25.13■■□□□ 1.61
PAX6-247ENST00000638965 ZNF219Q9P2Y4 722 aaPredicted RBP25.13■■□□□ 1.61
PAX6-247ENST00000638965 DSG3P32926 999 aa25.12■■□□□ 1.61
PAX6-247ENST00000638965 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
PAX6-247ENST00000638965 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
PAX6-247ENST00000638965 CSRNP3Q8WYN3 585 aa24.95■■□□□ 1.58
PAX6-247ENST00000638965 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
PAX6-247ENST00000638965 ATF5Q9Y2D1 282 aaPredicted RBP24.93■■□□□ 1.58
PAX6-247ENST00000638965 ABCB7O75027 752 aa24.86■■□□□ 1.57
PAX6-247ENST00000638965 ATXN8OSP0DMR3 200 aa24.82■■□□□ 1.56
PAX6-247ENST00000638965 POLA2Q14181 598 aa24.64■■□□□ 1.54
PAX6-247ENST00000638965 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
PAX6-247ENST00000638965 ZBTB12Q9Y330 459 aaPredicted RBP24.19■■□□□ 1.46
PAX6-247ENST00000638965 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
PAX6-247ENST00000638965 CUX2O14529 1486 aa24.16■■□□□ 1.46
PAX6-247ENST00000638965 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
PAX6-247ENST00000638965 HMGXB3Q12766 1538 aa24.01■■□□□ 1.43
PAX6-247ENST00000638965 ERCC6Q03468 1493 aa24■■□□□ 1.43
PAX6-247ENST00000638965 SMARCA4P51532 1647 aa24■■□□□ 1.43
PAX6-247ENST00000638965 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
PAX6-247ENST00000638965 RBM42Q9BTD8 480 aaKnown RBP23.92■■□□□ 1.42
PAX6-247ENST00000638965 FBLN2P98095 1184 aa23.88■■□□□ 1.41
PAX6-247ENST00000638965 NESP48681 1621 aa23.88■■□□□ 1.41
PAX6-247ENST00000638965 MKRN4PQ13434 485 aaPredicted RBP23.82■■□□□ 1.4
PAX6-247ENST00000638965 OSCARQ8IYS5 282 aa23.82■■□□□ 1.4
PAX6-247ENST00000638965 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
PAX6-247ENST00000638965 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
PAX6-247ENST00000638965 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
PAX6-247ENST00000638965 BAZ1BQ9UIG0 1483 aaKnown RBP23.76■■□□□ 1.39
PAX6-247ENST00000638965 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
PAX6-247ENST00000638965 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
PAX6-247ENST00000638965 KIF21AQ7Z4S6 1674 aa23.61■■□□□ 1.37
PAX6-247ENST00000638965 AKT1S1Q96B36 256 aa23.54■■□□□ 1.36
PAX6-247ENST00000638965 SPDYE2BA6NHP3 402 aa23.51■■□□□ 1.35
PAX6-247ENST00000638965 SPDYE6P0CI01 402 aa23.51■■□□□ 1.35
PAX6-247ENST00000638965 SPDYE2Q495Y8 402 aa23.51■■□□□ 1.35
PAX6-247ENST00000638965 PDS5BQ9NTI5 1447 aa23.47■■□□□ 1.35
PAX6-247ENST00000638965 CADPSQ9ULU8 1353 aa23.37■■□□□ 1.33
PAX6-247ENST00000638965 WDR62O43379 1518 aa23.36■■□□□ 1.33
PAX6-247ENST00000638965 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
PAX6-247ENST00000638965 ZNF692Q9BU19 519 aaPredicted RBP23.33■■□□□ 1.33
PAX6-247ENST00000638965 WIZO95785 1651 aa23.32■■□□□ 1.32
PAX6-247ENST00000638965 REM2Q8IYK8 340 aaPredicted RBP23.31■■□□□ 1.32
PAX6-247ENST00000638965 SSUH2Q9Y2M2 353 aa23.29■■□□□ 1.32
PAX6-247ENST00000638965 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
PAX6-247ENST00000638965 CHRDL2Q6WN34 429 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms